RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ERVK-24P63145 666 aa19.2■□□□□ 0.66
SMG5-204ENST00000476954 JAG1P78504 1218 aa19.2■□□□□ 0.66
SMG5-204ENST00000476954 LPAR1Q92633 364 aa19.2■□□□□ 0.66
SMG5-204ENST00000476954 RNPC3Q96LT9 517 aaKnown RBP19.2■□□□□ 0.66
SMG5-204ENST00000476954 HOXA7P31268 230 aaPredicted RBP19.19■□□□□ 0.66
SMG5-204ENST00000476954 RHBDL3P58872 404 aa19.19■□□□□ 0.66
SMG5-204ENST00000476954 MAP2K5Q13163 448 aa19.19■□□□□ 0.66
SMG5-204ENST00000476954 SHROOM1Q2M3G4 852 aaPredicted RBP19.19■□□□□ 0.66
SMG5-204ENST00000476954 CCAR1Q8IX12 1150 aaKnown RBP19.19■□□□□ 0.66
SMG5-204ENST00000476954 ASB2Q96Q27 587 aa19.19■□□□□ 0.66
SMG5-204ENST00000476954 SIPA1L1O43166 1804 aa19.18■□□□□ 0.66
SMG5-204ENST00000476954 EYA2O00167 538 aa19.18■□□□□ 0.66
SMG5-204ENST00000476954 CYP2C19P33261 490 aa19.18■□□□□ 0.66
SMG5-204ENST00000476954 CCDC27Q2M243 656 aa19.18■□□□□ 0.66
SMG5-204ENST00000476954 MFSD14CQ5VZR4 134 aa19.18■□□□□ 0.66
SMG5-204ENST00000476954 ANO1Q5XXA6 986 aa19.18■□□□□ 0.66
SMG5-204ENST00000476954 EDC3Q96F86 508 aaKnown RBP19.18■□□□□ 0.66
SMG5-204ENST00000476954 NECAB3Q96P71 396 aaPredicted RBP19.18■□□□□ 0.66
SMG5-204ENST00000476954 UHRF1Q96T88 793 aaPredicted RBP19.18■□□□□ 0.66
SMG5-204ENST00000476954 IL16Q14005 1332 aa19.18■□□□□ 0.66
SMG5-204ENST00000476954 DNAJB2P25686 324 aa19.17■□□□□ 0.66
SMG5-204ENST00000476954 RFX5P48382 616 aaPredicted RBP19.17■□□□□ 0.66
SMG5-204ENST00000476954 BACE1P56817 501 aa19.17■□□□□ 0.66
SMG5-204ENST00000476954 ATG9AQ7Z3C6 839 aa19.17■□□□□ 0.66
SMG5-204ENST00000476954 DZIP1Q86YF9 867 aaKnown RBP19.17■□□□□ 0.66
SMG5-204ENST00000476954 ATXN2LQ8WWM7 1075 aaKnown RBP19.17■□□□□ 0.66
SMG5-204ENST00000476954 TMOD4Q9NZQ9 345 aa19.17■□□□□ 0.66
SMG5-204ENST00000476954 PIEZO1Q92508 2521 aa19.17■□□□□ 0.66
SMG5-204ENST00000476954 ATP2B3Q16720 1220 aa19.16■□□□□ 0.66
SMG5-204ENST00000476954 NPLOC4Q8TAT6 608 aa19.16■□□□□ 0.66
SMG5-204ENST00000476954 ZNF384Q8TF68 577 aa19.16■□□□□ 0.66
SMG5-204ENST00000476954 FERMT2Q96AC1 680 aa19.16■□□□□ 0.66
SMG5-204ENST00000476954 WDR18Q9BV38 432 aa19.16■□□□□ 0.66
SMG5-204ENST00000476954 TBC1D2Q9BYX2 928 aa19.16■□□□□ 0.66
SMG5-204ENST00000476954 ZNF576Q9H609 170 aa19.16■□□□□ 0.66
SMG5-204ENST00000476954 AS3MTQ9HBK9 375 aa19.16■□□□□ 0.66
SMG5-204ENST00000476954 GNL3LQ9NVN8 582 aaKnown RBP19.16■□□□□ 0.66
SMG5-204ENST00000476954 THEGQ9P2T0 379 aa19.16■□□□□ 0.66
SMG5-204ENST00000476954 ABCF2Q9UG63 623 aa19.16■□□□□ 0.66
SMG5-204ENST00000476954 DENND2AQ9ULE3 1009 aa19.16■□□□□ 0.66
SMG5-204ENST00000476954 CNMDO75829 334 aa19.15■□□□□ 0.66
SMG5-204ENST00000476954 MYCNP04198 464 aaPredicted RBP19.15■□□□□ 0.66
SMG5-204ENST00000476954 SNX17Q15036 470 aa19.15■□□□□ 0.66
SMG5-204ENST00000476954 FAM163AQ96GL9 167 aaPredicted RBP19.15■□□□□ 0.66
SMG5-204ENST00000476954 CWC22Q9HCG8 908 aaKnown RBP19.15■□□□□ 0.66
SMG5-204ENST00000476954 MROH7-TTC4A0A0A0MT08 1334 aa19.15■□□□□ 0.66
SMG5-204ENST00000476954 PLXNA1Q9UIW2 1896 aa19.15■□□□□ 0.66
SMG5-204ENST00000476954 MSCO60682 206 aa19.14■□□□□ 0.65
SMG5-204ENST00000476954 ADORA1P30542 326 aa19.14■□□□□ 0.65
SMG5-204ENST00000476954 TLE2Q04725 743 aa19.14■□□□□ 0.65
SMG5-204ENST00000476954 CCDC85BQ15834 202 aaPredicted RBP19.14■□□□□ 0.65
SMG5-204ENST00000476954 GPR75-ASB3A0A0A6YYF3 556 aa19.13■□□□□ 0.65
SMG5-204ENST00000476954 ADCYAP1R1P41586 468 aa19.13■□□□□ 0.65
SMG5-204ENST00000476954 ATP2B2Q01814 1243 aa19.13■□□□□ 0.65
SMG5-204ENST00000476954 WDR78Q5VTH9 848 aa19.13■□□□□ 0.65
SMG5-204ENST00000476954 PRDM12Q9H4Q4 367 aa19.13■□□□□ 0.65
SMG5-204ENST00000476954 SEMA3EO15041 775 aa19.12■□□□□ 0.65
SMG5-204ENST00000476954 CYBAP13498 195 aa19.12■□□□□ 0.65
SMG5-204ENST00000476954 PTPREP23469 700 aa19.12■□□□□ 0.65
SMG5-204ENST00000476954 MRPS5P82675 430 aaKnown RBP19.12■□□□□ 0.65
SMG5-204ENST00000476954 RASGRF1Q13972 1273 aa19.12■□□□□ 0.65
SMG5-204ENST00000476954 NCBP3Q53F19 620 aaKnown RBP19.12■□□□□ 0.65
SMG5-204ENST00000476954 ARRDC4Q8NCT1 418 aa19.12■□□□□ 0.65
SMG5-204ENST00000476954 TIFAQ96CG3 184 aa19.12■□□□□ 0.65
SMG5-204ENST00000476954 SIL1Q9H173 461 aa19.12■□□□□ 0.65
SMG5-204ENST00000476954 PRKRIP1Q9H875 184 aaPredicted RBP19.12■□□□□ 0.65
SMG5-204ENST00000476954 SYNGAP1Q96PV0 1343 aa19.11■□□□□ 0.65
SMG5-204ENST00000476954 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.11■□□□□ 0.65
SMG5-204ENST00000476954 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.11■□□□□ 0.65
SMG5-204ENST00000476954 KBTBD13C9JR72 458 aa19.11■□□□□ 0.65
SMG5-204ENST00000476954 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
SMG5-204ENST00000476954 IGHA2P01877 340 aa19.11■□□□□ 0.65
SMG5-204ENST00000476954 PBX2P40425 430 aa19.11■□□□□ 0.65
SMG5-204ENST00000476954 MECOMQ03112 1051 aa19.11■□□□□ 0.65
SMG5-204ENST00000476954 ADGRE1Q14246 886 aa19.11■□□□□ 0.65
SMG5-204ENST00000476954 EMILIN3Q9NT22 766 aa19.11■□□□□ 0.65
SMG5-204ENST00000476954 MUC6Q6W4X9 2439 aa19.1■□□□□ 0.65
SMG5-204ENST00000476954 SLC15A5A6NIM6 579 aa19.1■□□□□ 0.65
SMG5-204ENST00000476954 GRXCR1A8MXD5 290 aa19.1■□□□□ 0.65
SMG5-204ENST00000476954 USP17L10C9JJH3 530 aa19.1■□□□□ 0.65
SMG5-204ENST00000476954 GDF11O95390 407 aa19.1■□□□□ 0.65
SMG5-204ENST00000476954 CCDC102BQ68D86 513 aa19.1■□□□□ 0.65
SMG5-204ENST00000476954 SLF2Q8IX21 1173 aa19.1■□□□□ 0.65
SMG5-204ENST00000476954 ZGPATQ8N5A5 531 aaKnown RBP19.1■□□□□ 0.65
SMG5-204ENST00000476954 GAS2L1Q99501 681 aaPredicted RBP19.1■□□□□ 0.65
SMG5-204ENST00000476954 CHD9Q3L8U1 2897 aa19.1■□□□□ 0.65
SMG5-204ENST00000476954 C19orf81C9J6K1 198 aa19.09■□□□□ 0.65
SMG5-204ENST00000476954 HOXC6P09630 235 aa19.09■□□□□ 0.65
SMG5-204ENST00000476954 C1QTNF1Q9BXJ1 281 aa19.09■□□□□ 0.65
SMG5-204ENST00000476954 DNAJC18Q9H819 358 aa19.09■□□□□ 0.65
SMG5-204ENST00000476954 SALL2Q9Y467 1007 aaPredicted RBP19.09■□□□□ 0.65
SMG5-204ENST00000476954 SMCHD1A6NHR9 2005 aa19.08■□□□□ 0.65
SMG5-204ENST00000476954 GLRX3O76003 335 aaKnown RBP19.08■□□□□ 0.64
SMG5-204ENST00000476954 ASNSP08243 561 aa19.08■□□□□ 0.64
SMG5-204ENST00000476954 GRB14Q14449 540 aa19.08■□□□□ 0.64
SMG5-204ENST00000476954 CCDC184Q52MB2 194 aa19.08■□□□□ 0.64
SMG5-204ENST00000476954 AKNAD1Q5T1N1 836 aa19.08■□□□□ 0.64
SMG5-204ENST00000476954 LRFN3Q9BTN0 628 aa19.08■□□□□ 0.64
SMG5-204ENST00000476954 USP44Q9H0E7 712 aa19.08■□□□□ 0.64
SMG5-204ENST00000476954 CEP126Q9P2H0 1117 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms