RNA–Protein interactions for RNA: ENST00000476656.1

COL19A1-202, Transcript of collagen type XIX alpha 1 chain, humanhuman

TSL 5

Gene COL19A1, Length 1,515 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-202ENST00000476656 SLURP2P0DP57 97 aa15.3■□□□□ 0.04
COL19A1-202ENST00000476656 MCM2P49736 904 aa15.3■□□□□ 0.04
COL19A1-202ENST00000476656 SGMS1Q86VZ5 419 aa15.3■□□□□ 0.04
COL19A1-202ENST00000476656 ZSCAN29Q8IWY8 852 aaPredicted RBP15.3■□□□□ 0.04
COL19A1-202ENST00000476656 NEDD1Q8NHV4 660 aa15.3■□□□□ 0.04
COL19A1-202ENST00000476656 ANKS1AQ92625 1134 aa15.3■□□□□ 0.04
COL19A1-202ENST00000476656 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.3■□□□□ 0.04
COL19A1-202ENST00000476656 IGKV6D-41A0A0C4DH26 115 aa15.29■□□□□ 0.04
COL19A1-202ENST00000476656 SH2B2O14492 632 aaPredicted RBP15.29■□□□□ 0.04
COL19A1-202ENST00000476656 LIFRP42702 1097 aa15.29■□□□□ 0.04
COL19A1-202ENST00000476656 RCSD1Q6JBY9 416 aa15.29■□□□□ 0.04
COL19A1-202ENST00000476656 Q6ZUG5 572 aa15.29■□□□□ 0.04
COL19A1-202ENST00000476656 CHST3Q7LGC8 479 aa15.29■□□□□ 0.04
COL19A1-202ENST00000476656 STK11IPQ8N1F8 1099 aa15.29■□□□□ 0.04
COL19A1-202ENST00000476656 CCDC17Q96LX7 622 aa15.29■□□□□ 0.04
COL19A1-202ENST00000476656 IL17RBQ9NRM6 502 aa15.29■□□□□ 0.04
COL19A1-202ENST00000476656 DOCK1Q14185 1865 aa15.29■□□□□ 0.04
COL19A1-202ENST00000476656 RANBP6O60518 1105 aaKnown RBP15.28■□□□□ 0.04
COL19A1-202ENST00000476656 VEGFAP15692 232 aaPredicted RBP15.28■□□□□ 0.04
COL19A1-202ENST00000476656 ANKRD1Q15327 319 aa15.28■□□□□ 0.04
COL19A1-202ENST00000476656 RRP12Q5JTH9 1297 aaKnown RBP15.28■□□□□ 0.04
COL19A1-202ENST00000476656 LY9Q9HBG7 655 aa15.28■□□□□ 0.04
COL19A1-202ENST00000476656 MKNK2Q9HBH9 465 aa15.28■□□□□ 0.04
COL19A1-202ENST00000476656 GPHNQ9NQX3 736 aaPredicted RBP15.28■□□□□ 0.04
COL19A1-202ENST00000476656 ANGEL1Q9UNK9 670 aaKnown RBP15.28■□□□□ 0.04
COL19A1-202ENST00000476656 SCAF8Q9UPN6 1271 aaKnown RBP15.28■□□□□ 0.04
COL19A1-202ENST00000476656 OTOFQ9HC10 1997 aa15.28■□□□□ 0.04
COL19A1-202ENST00000476656 FAM196BA6NMK8 535 aa15.27■□□□□ 0.04
COL19A1-202ENST00000476656 PHF20L1A8MW92 1017 aa15.27■□□□□ 0.04
COL19A1-202ENST00000476656 TFAP4Q01664 338 aa15.27■□□□□ 0.04
COL19A1-202ENST00000476656 RRP1BQ14684 758 aaKnown RBP15.27■□□□□ 0.04
COL19A1-202ENST00000476656 ZNF444Q8N0Y2 327 aaPredicted RBP15.27■□□□□ 0.04
COL19A1-202ENST00000476656 CRACR2BQ8N4Y2 399 aaPredicted RBP15.27■□□□□ 0.04
COL19A1-202ENST00000476656 ENAHQ8N8S7 591 aaPredicted RBP15.27■□□□□ 0.04
COL19A1-202ENST00000476656 DCPSQ96C86 337 aaKnown RBP15.27■□□□□ 0.04
COL19A1-202ENST00000476656 ZSCAN10Q96SZ4 725 aaPredicted RBP15.27■□□□□ 0.04
COL19A1-202ENST00000476656 LRRC2Q9BYS8 371 aa15.27■□□□□ 0.04
COL19A1-202ENST00000476656 TOMM22Q9NS69 142 aa15.27■□□□□ 0.04
COL19A1-202ENST00000476656 LIMCH1Q9UPQ0 1083 aa15.27■□□□□ 0.04
COL19A1-202ENST00000476656 PHIPQ8WWQ0 1821 aa15.27■□□□□ 0.03
COL19A1-202ENST00000476656 TSPY2A6NKD2 308 aa15.27■□□□□ 0.03
COL19A1-202ENST00000476656 K7ELQ4 463 aaPredicted RBP15.27■□□□□ 0.03
COL19A1-202ENST00000476656 FAM47AQ5JRC9 791 aa15.27■□□□□ 0.03
COL19A1-202ENST00000476656 NBPF12Q5TAG4 269 aaPredicted RBP15.27■□□□□ 0.03
COL19A1-202ENST00000476656 IQCA1Q86XH1 822 aa15.27■□□□□ 0.03
COL19A1-202ENST00000476656 DGKHQ86XP1 1220 aa15.27■□□□□ 0.03
COL19A1-202ENST00000476656 BRF1Q92994 677 aa15.27■□□□□ 0.03
COL19A1-202ENST00000476656 SENP2Q9HC62 589 aa15.27■□□□□ 0.03
COL19A1-202ENST00000476656 ZNF112Q9UJU3 913 aa15.27■□□□□ 0.03
COL19A1-202ENST00000476656 TPCN1Q9ULQ1 816 aa15.27■□□□□ 0.03
COL19A1-202ENST00000476656 TNKSO95271 1327 aa15.26■□□□□ 0.03
COL19A1-202ENST00000476656 AKR1B1P15121 316 aa15.26■□□□□ 0.03
COL19A1-202ENST00000476656 CCDC178Q5BJE1 867 aa15.26■□□□□ 0.03
COL19A1-202ENST00000476656 HOOK2Q96ED9 719 aa15.26■□□□□ 0.03
COL19A1-202ENST00000476656 ZNF274Q96GC6 653 aaPredicted RBP15.26■□□□□ 0.03
COL19A1-202ENST00000476656 TMX3Q96JJ7 454 aa15.26■□□□□ 0.03
COL19A1-202ENST00000476656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.26■□□□□ 0.03
COL19A1-202ENST00000476656 RRAGCQ9HB90 399 aa15.26■□□□□ 0.03
COL19A1-202ENST00000476656 NID2Q14112 1375 aa15.26■□□□□ 0.03
COL19A1-202ENST00000476656 IFIT3O14879 490 aaKnown RBP15.25■□□□□ 0.03
COL19A1-202ENST00000476656 NMT2O60551 498 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 POTEIP0CG38 1075 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 POTEJP0CG39 1038 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 TSPY3P0CV98 308 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 TSPY8P0CW00 308 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 GUCY1A2P33402 732 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 RCAN1P53805 252 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 JAG1P78504 1218 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 CUL4AQ13619 759 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 SART3Q15020 963 aaKnown RBP15.25■□□□□ 0.03
COL19A1-202ENST00000476656 ME3Q16798 604 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 CERKLQ49MI3 558 aaPredicted RBP15.25■□□□□ 0.03
COL19A1-202ENST00000476656 TMEM67Q5HYA8 995 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 KRT26Q7Z3Y9 468 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 SULF1Q8IWU6 871 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 TMTC2Q8N394 836 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 ZSCAN31Q96LW9 406 aaPredicted RBP15.25■□□□□ 0.03
COL19A1-202ENST00000476656 ZKSCAN3Q9BRR0 538 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 UBAC1Q9BSL1 405 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 NMRK2Q9NPI5 230 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 BRPF3Q9ULD4 1205 aa15.25■□□□□ 0.03
COL19A1-202ENST00000476656 TRPM7Q96QT4 1865 aa15.24■□□□□ 0.03
COL19A1-202ENST00000476656 LARGE1O95461 756 aa15.24■□□□□ 0.03
COL19A1-202ENST00000476656 ST3GAL1Q11201 340 aa15.24■□□□□ 0.03
COL19A1-202ENST00000476656 BECN1Q14457 450 aa15.24■□□□□ 0.03
COL19A1-202ENST00000476656 HSCBQ8IWL3 235 aa15.24■□□□□ 0.03
COL19A1-202ENST00000476656 IPO9Q96P70 1041 aaKnown RBP15.24■□□□□ 0.03
COL19A1-202ENST00000476656 SH2B1Q9NRF2 756 aaPredicted RBP15.24■□□□□ 0.03
COL19A1-202ENST00000476656 MTMR4Q9NYA4 1195 aa15.24■□□□□ 0.03
COL19A1-202ENST00000476656 HPS5Q9UPZ3 1129 aa15.24■□□□□ 0.03
COL19A1-202ENST00000476656 ADM5C9JUS6 153 aa15.23■□□□□ 0.03
COL19A1-202ENST00000476656 PDIA3P30101 505 aaKnown RBP15.23■□□□□ 0.03
COL19A1-202ENST00000476656 CAP2P40123 477 aa15.23■□□□□ 0.03
COL19A1-202ENST00000476656 APOBRQ0VD83 1088 aa15.23■□□□□ 0.03
COL19A1-202ENST00000476656 WTAPQ15007 396 aa15.23■□□□□ 0.03
COL19A1-202ENST00000476656 SHROOM1Q2M3G4 852 aaPredicted RBP15.23■□□□□ 0.03
COL19A1-202ENST00000476656 SUPT20HL1Q3ZLR7 823 aa15.23■□□□□ 0.03
COL19A1-202ENST00000476656 DCAF15Q66K64 600 aa15.23■□□□□ 0.03
COL19A1-202ENST00000476656 APOA5Q6Q788 366 aa15.23■□□□□ 0.03
COL19A1-202ENST00000476656 TMEM179Q6ZVK1 233 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms