RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 MTMR2Q13614 643 aa16.29■□□□□ 0.2
HMGCS2-203ENST00000476640 AACSQ86V21 672 aa16.29■□□□□ 0.2
HMGCS2-203ENST00000476640 U2AF1L4Q8WU68 220 aaKnown RBP16.29■□□□□ 0.2
HMGCS2-203ENST00000476640 DPF3Q92784 378 aa16.29■□□□□ 0.2
HMGCS2-203ENST00000476640 TLR7Q9NYK1 1049 aaKnown RBP16.29■□□□□ 0.2
HMGCS2-203ENST00000476640 TAOK2Q9UL54 1235 aa16.29■□□□□ 0.2
HMGCS2-203ENST00000476640 USP17L10C9JJH3 530 aa16.28■□□□□ 0.2
HMGCS2-203ENST00000476640 ELNP15502 786 aa16.28■□□□□ 0.2
HMGCS2-203ENST00000476640 USP5P45974 858 aa16.28■□□□□ 0.2
HMGCS2-203ENST00000476640 RRP1BQ14684 758 aaKnown RBP16.28■□□□□ 0.2
HMGCS2-203ENST00000476640 TTF1Q15361 905 aaPredicted RBP16.28■□□□□ 0.2
HMGCS2-203ENST00000476640 MAGEB6Q8N7X4 407 aa16.28■□□□□ 0.2
HMGCS2-203ENST00000476640 UNC93B1Q9H1C4 597 aa16.28■□□□□ 0.2
HMGCS2-203ENST00000476640 CHMP4BQ9H444 224 aaKnown RBP16.28■□□□□ 0.2
HMGCS2-203ENST00000476640 SAP30BPQ9UHR5 308 aaKnown RBP16.28■□□□□ 0.2
HMGCS2-203ENST00000476640 EXOC6BQ9Y2D4 811 aa16.28■□□□□ 0.2
HMGCS2-203ENST00000476640 HMMRO75330 724 aa16.27■□□□□ 0.2
HMGCS2-203ENST00000476640 FARP2O94887 1054 aaPredicted RBP16.27■□□□□ 0.2
HMGCS2-203ENST00000476640 SGPL1O95470 568 aa16.27■□□□□ 0.2
HMGCS2-203ENST00000476640 HOXA7P31268 230 aaPredicted RBP16.27■□□□□ 0.2
HMGCS2-203ENST00000476640 DYNLL1P63167 89 aaKnown RBP16.27■□□□□ 0.2
HMGCS2-203ENST00000476640 TTC6Q86TZ1 520 aa16.27■□□□□ 0.2
HMGCS2-203ENST00000476640 PANK1Q8TE04 598 aa16.27■□□□□ 0.2
HMGCS2-203ENST00000476640 GTF3C2Q8WUA4 911 aaPredicted RBP16.27■□□□□ 0.2
HMGCS2-203ENST00000476640 MORF4L1Q9UBU8 362 aa16.27■□□□□ 0.2
HMGCS2-203ENST00000476640 ZBTB21Q9ULJ3 1066 aa16.27■□□□□ 0.2
HMGCS2-203ENST00000476640 PLXNB2O15031 1838 aa16.26■□□□□ 0.19
HMGCS2-203ENST00000476640 TRIOBPQ9H2D6 2365 aa16.26■□□□□ 0.19
HMGCS2-203ENST00000476640 MYH7P12883 1935 aa16.26■□□□□ 0.19
HMGCS2-203ENST00000476640 H0YGN5 161 aa16.26■□□□□ 0.19
HMGCS2-203ENST00000476640 GDF11O95390 407 aa16.26■□□□□ 0.19
HMGCS2-203ENST00000476640 TFRCP02786 760 aaKnown RBP16.26■□□□□ 0.19
HMGCS2-203ENST00000476640 RPAP2Q8IXW5 612 aaPredicted RBP16.26■□□□□ 0.19
HMGCS2-203ENST00000476640 MIGA1Q8NAN2 632 aa16.26■□□□□ 0.19
HMGCS2-203ENST00000476640 EHD4Q9H223 541 aa16.26■□□□□ 0.19
HMGCS2-203ENST00000476640 DNAJC18Q9H819 358 aa16.26■□□□□ 0.19
HMGCS2-203ENST00000476640 SERPINB13Q9UIV8 391 aa16.26■□□□□ 0.19
HMGCS2-203ENST00000476640 NR2E3Q9Y5X4 410 aa16.26■□□□□ 0.19
HMGCS2-203ENST00000476640 HMGCRP04035 888 aa16.25■□□□□ 0.19
HMGCS2-203ENST00000476640 USP17L2Q6R6M4 530 aa16.25■□□□□ 0.19
HMGCS2-203ENST00000476640 UBE2Q1Q7Z7E8 422 aa16.25■□□□□ 0.19
HMGCS2-203ENST00000476640 CCAR1Q8IX12 1150 aaKnown RBP16.25■□□□□ 0.19
HMGCS2-203ENST00000476640 CLASRPQ8N2M8 674 aaKnown RBP16.25■□□□□ 0.19
HMGCS2-203ENST00000476640 RHPN1Q8TCX5 695 aa16.25■□□□□ 0.19
HMGCS2-203ENST00000476640 DDX19BQ9UMR2 479 aa16.25■□□□□ 0.19
HMGCS2-203ENST00000476640 DDX60LQ5H9U9 1706 aaKnown RBP16.25■□□□□ 0.19
HMGCS2-203ENST00000476640 HERVK_113P62684 666 aa16.24■□□□□ 0.19
HMGCS2-203ENST00000476640 GPRC5AQ8NFJ5 357 aa16.24■□□□□ 0.19
HMGCS2-203ENST00000476640 KIF1BPQ96EK5 621 aa16.24■□□□□ 0.19
HMGCS2-203ENST00000476640 DEFB118Q96PH6 123 aa16.24■□□□□ 0.19
HMGCS2-203ENST00000476640 PAK6Q9NQU5 681 aaPredicted RBP16.24■□□□□ 0.19
HMGCS2-203ENST00000476640 COLQQ9Y215 455 aaPredicted RBP16.24■□□□□ 0.19
HMGCS2-203ENST00000476640 MAGEB6P1A0A0J9YX57 407 aa16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 GH2P01242 217 aa16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 MAPK4P31152 587 aa16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 USP14P54578 494 aa16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 PDE3AQ14432 1141 aa16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 TATDN1Q6P1N9 297 aa16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 TRMT44Q8IYL2 757 aaKnown RBP16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 SOCS4Q8WXH5 440 aa16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 P2RX7Q99572 595 aaKnown RBP16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 FEZ1Q99689 392 aa16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 CRNKL1Q9BZJ0 848 aaKnown RBP16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 ANTXR1Q9H6X2 564 aa16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 IL1RAPL2Q9NP60 686 aa16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 CABP5Q9NP86 173 aa16.23■□□□□ 0.19
HMGCS2-203ENST00000476640 JAG1P78504 1218 aa16.22■□□□□ 0.19
HMGCS2-203ENST00000476640 CERKLQ49MI3 558 aaPredicted RBP16.22■□□□□ 0.19
HMGCS2-203ENST00000476640 SLC9C2Q5TAH2 1124 aa16.22■□□□□ 0.19
HMGCS2-203ENST00000476640 NUDT12Q9BQG2 462 aa16.22■□□□□ 0.19
HMGCS2-203ENST00000476640 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.22■□□□□ 0.19
HMGCS2-203ENST00000476640 HMX1Q9NP08 348 aaPredicted RBP16.22■□□□□ 0.19
HMGCS2-203ENST00000476640 GJD2Q9UKL4 321 aa16.22■□□□□ 0.19
HMGCS2-203ENST00000476640 NDUFB9Q9Y6M9 179 aa16.22■□□□□ 0.19
HMGCS2-203ENST00000476640 RPTORQ8N122 1335 aa16.21■□□□□ 0.19
HMGCS2-203ENST00000476640 RAB11FIP3O75154 756 aa16.21■□□□□ 0.19
HMGCS2-203ENST00000476640 POLR3DP05423 398 aaPredicted RBP16.21■□□□□ 0.19
HMGCS2-203ENST00000476640 RAB3GAP1Q15042 981 aa16.21■□□□□ 0.19
HMGCS2-203ENST00000476640 ABCB5Q2M3G0 1257 aa16.21■□□□□ 0.19
HMGCS2-203ENST00000476640 ANKLE1Q8NAG6 615 aa16.21■□□□□ 0.19
HMGCS2-203ENST00000476640 CRISPLD2Q9H0B8 497 aa16.21■□□□□ 0.19
HMGCS2-203ENST00000476640 CWC22Q9HCG8 908 aaKnown RBP16.21■□□□□ 0.19
HMGCS2-203ENST00000476640 ALPK3Q96L96 1907 aa16.21■□□□□ 0.19
HMGCS2-203ENST00000476640 BAZ2AQ9UIF9 1905 aaKnown RBP16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 USP17L15C9J2P7 530 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 USP17L13C9JLJ4 530 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 USP17L11C9JVI0 530 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 USP17L18D6R9N7 530 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 USP17L22D6RA61 530 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 USP17L17D6RBQ6 530 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 USP17L19D6RCP7 530 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 USP17L20D6RJB6 530 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 APBB1O00213 710 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 EVI5O60447 810 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 GLRX3O76003 335 aaKnown RBP16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 XRCC5P13010 732 aaKnown RBP16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 PDE6AP16499 860 aa16.2■□□□□ 0.18
HMGCS2-203ENST00000476640 FXR1P51114 621 aaKnown RBP eCLIP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms