RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 MTMR2Q13614 643 aa17.08■□□□□ 0.32
SLC6A8-209ENST00000476466 TATDN1Q6P1N9 297 aa17.08■□□□□ 0.32
SLC6A8-209ENST00000476466 FASTKD5Q7L8L6 764 aaKnown RBP17.08■□□□□ 0.32
SLC6A8-209ENST00000476466 CERS3Q8IU89 383 aa17.08■□□□□ 0.32
SLC6A8-209ENST00000476466 SLC44A5Q8NCS7 719 aa17.08■□□□□ 0.32
SLC6A8-209ENST00000476466 PI4K2BQ8TCG2 481 aa17.08■□□□□ 0.32
SLC6A8-209ENST00000476466 PUS7LQ9H0K6 701 aaKnown RBP17.08■□□□□ 0.32
SLC6A8-209ENST00000476466 EHD4Q9H223 541 aa17.08■□□□□ 0.32
SLC6A8-209ENST00000476466 SERPINB13Q9UIV8 391 aa17.08■□□□□ 0.32
SLC6A8-209ENST00000476466 AGTPBP1Q9UPW5 1226 aa17.08■□□□□ 0.32
SLC6A8-209ENST00000476466 CYP2D7A0A087X1C5 515 aa17.07■□□□□ 0.32
SLC6A8-209ENST00000476466 GH2P01242 217 aa17.07■□□□□ 0.32
SLC6A8-209ENST00000476466 ASNSP08243 561 aa17.07■□□□□ 0.32
SLC6A8-209ENST00000476466 SH3D19Q5HYK7 790 aa17.07■□□□□ 0.32
SLC6A8-209ENST00000476466 WDR18Q9BV38 432 aa17.07■□□□□ 0.32
SLC6A8-209ENST00000476466 CRNKL1Q9BZJ0 848 aaKnown RBP17.07■□□□□ 0.32
SLC6A8-209ENST00000476466 PEX10O60683 326 aa17.06■□□□□ 0.32
SLC6A8-209ENST00000476466 GUCY1A2P33402 732 aa17.06■□□□□ 0.32
SLC6A8-209ENST00000476466 PROCA1Q8NCQ7 364 aaPredicted RBP17.06■□□□□ 0.32
SLC6A8-209ENST00000476466 DYNLL2Q96FJ2 89 aa17.06■□□□□ 0.32
SLC6A8-209ENST00000476466 SLC45A1Q9Y2W3 748 aa17.06■□□□□ 0.32
SLC6A8-209ENST00000476466 MGAMO43451 1857 aa17.05■□□□□ 0.32
SLC6A8-209ENST00000476466 KIAA0100Q14667 2235 aaKnown RBP17.05■□□□□ 0.32
SLC6A8-209ENST00000476466 POTEFA5A3E0 1075 aa17.05■□□□□ 0.32
SLC6A8-209ENST00000476466 PSMC4P43686 418 aa17.05■□□□□ 0.32
SLC6A8-209ENST00000476466 BACE1P56817 501 aa17.05■□□□□ 0.32
SLC6A8-209ENST00000476466 UBE3CQ15386 1083 aa17.05■□□□□ 0.32
SLC6A8-209ENST00000476466 KBTBD3Q8NAB2 608 aa17.05■□□□□ 0.32
SLC6A8-209ENST00000476466 ARMC5Q96C12 935 aa17.05■□□□□ 0.32
SLC6A8-209ENST00000476466 MCM9Q9NXL9 1143 aa17.05■□□□□ 0.32
SLC6A8-209ENST00000476466 POLR3DP05423 398 aaPredicted RBP17.04■□□□□ 0.32
SLC6A8-209ENST00000476466 OSBPP22059 807 aa17.04■□□□□ 0.32
SLC6A8-209ENST00000476466 POTEEQ6S8J3 1075 aa17.04■□□□□ 0.32
SLC6A8-209ENST00000476466 EXOC6Q8TAG9 804 aa17.04■□□□□ 0.32
SLC6A8-209ENST00000476466 ACER1Q8TDN7 264 aa17.04■□□□□ 0.32
SLC6A8-209ENST00000476466 OSBP2Q969R2 916 aa17.04■□□□□ 0.32
SLC6A8-209ENST00000476466 ZNF333Q96JL9 665 aa17.04■□□□□ 0.32
SLC6A8-209ENST00000476466 TRIM34Q9BYJ4 488 aa17.04■□□□□ 0.32
SLC6A8-209ENST00000476466 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.04■□□□□ 0.323e-24■■□□□ 12
SLC6A8-209ENST00000476466 ASCC2Q9H1I8 757 aaPredicted RBP17.04■□□□□ 0.32
SLC6A8-209ENST00000476466 RBBP6Q7Z6E9 1792 aaKnown RBP17.03■□□□□ 0.32
SLC6A8-209ENST00000476466 MLLT1Q03111 559 aaPredicted RBP17.03■□□□□ 0.32
SLC6A8-209ENST00000476466 HDAC1Q13547 482 aaPredicted RBP17.03■□□□□ 0.32
SLC6A8-209ENST00000476466 TTC6Q86TZ1 520 aa17.03■□□□□ 0.32
SLC6A8-209ENST00000476466 CLEC10AQ8IUN9 316 aa17.03■□□□□ 0.32
SLC6A8-209ENST00000476466 SH3TC2Q8TF17 1288 aa17.03■□□□□ 0.32
SLC6A8-209ENST00000476466 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
SLC6A8-209ENST00000476466 EMILIN3Q9NT22 766 aa17.03■□□□□ 0.32
SLC6A8-209ENST00000476466 M0R2C6 588 aa17.02■□□□□ 0.32
SLC6A8-209ENST00000476466 PRKCZQ05513 592 aa17.02■□□□□ 0.32
SLC6A8-209ENST00000476466 ANKRD13CQ8N6S4 541 aa17.02■□□□□ 0.32
SLC6A8-209ENST00000476466 SMCR8Q8TEV9 937 aaPredicted RBP17.02■□□□□ 0.32
SLC6A8-209ENST00000476466 AS3MTQ9HBK9 375 aa17.02■□□□□ 0.32
SLC6A8-209ENST00000476466 SRRDQ9UH36 339 aa17.02■□□□□ 0.32
SLC6A8-209ENST00000476466 GABRQQ9UN88 632 aa17.02■□□□□ 0.32
SLC6A8-209ENST00000476466 DOCK3Q8IZD9 2030 aa17.02■□□□□ 0.32
SLC6A8-209ENST00000476466 TTC41PQ6P2S7 1318 aa17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 USP17L10C9JJH3 530 aa17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 MX1P20591 662 aa17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 KIF22Q14807 665 aa17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 SEPT2Q15019 361 aa17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 RAB3GAP1Q15042 981 aa17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 ZYXQ15942 572 aaKnown RBP17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 ABCB5Q2M3G0 1257 aa17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 CERKLQ49MI3 558 aaPredicted RBP17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 GPATCH3Q96I76 525 aa17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 STRBPQ96SI9 672 aaKnown RBP17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 SEC62Q99442 399 aaKnown RBP17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 EPB41L4AQ9HCS5 686 aaPredicted RBP17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 GINM1Q9NU53 330 aa17.01■□□□□ 0.31
SLC6A8-209ENST00000476466 A0A1W2PRG0 241 aa17■□□□□ 0.31
SLC6A8-209ENST00000476466 USP17L12C9JPN9 530 aa17■□□□□ 0.31
SLC6A8-209ENST00000476466 USP17L21D6R901 530 aa17■□□□□ 0.31
SLC6A8-209ENST00000476466 FMNL1O95466 1100 aaPredicted RBP17■□□□□ 0.31
SLC6A8-209ENST00000476466 MYCP01106 439 aaPredicted RBP17■□□□□ 0.31
SLC6A8-209ENST00000476466 SLC9C1Q4G0N8 1177 aa17■□□□□ 0.31
SLC6A8-209ENST00000476466 ANKRD45Q5TZF3 282 aa17■□□□□ 0.31
SLC6A8-209ENST00000476466 C12orf60Q5U649 245 aa17■□□□□ 0.31
SLC6A8-209ENST00000476466 TXNRD2Q9NNW7 524 aa17■□□□□ 0.31
SLC6A8-209ENST00000476466 ATP8A2Q9NTI2 1148 aa17■□□□□ 0.31
SLC6A8-209ENST00000476466 SLC4A4Q9Y6R1 1079 aa17■□□□□ 0.31
SLC6A8-209ENST00000476466 PDE4DIPQ5VU43 2346 aa16.99■□□□□ 0.31
SLC6A8-209ENST00000476466 MYPNQ86TC9 1320 aa16.99■□□□□ 0.31
SLC6A8-209ENST00000476466 GSG1L2A8MUP6 293 aa16.99■□□□□ 0.31
SLC6A8-209ENST00000476466 RNF113AO15541 343 aaKnown RBP16.99■□□□□ 0.31
SLC6A8-209ENST00000476466 IGHDP01880 384 aa16.99■□□□□ 0.31
SLC6A8-209ENST00000476466 AKR1B1P15121 316 aa16.99■□□□□ 0.31
SLC6A8-209ENST00000476466 HOXA7P31268 230 aaPredicted RBP16.99■□□□□ 0.31
SLC6A8-209ENST00000476466 FAM110CQ1W6H9 321 aa16.99■□□□□ 0.31
SLC6A8-209ENST00000476466 KIAA1755Q5JYT7 1200 aa16.99■□□□□ 0.31
SLC6A8-209ENST00000476466 CTR9Q6PD62 1173 aa16.99■□□□□ 0.31
SLC6A8-209ENST00000476466 APPBP2Q92624 585 aa16.99■□□□□ 0.31
SLC6A8-209ENST00000476466 P2RX7Q99572 595 aaKnown RBP16.99■□□□□ 0.31
SLC6A8-209ENST00000476466 MYH8P13535 1937 aa16.99■□□□□ 0.31
SLC6A8-209ENST00000476466 PLXNB2O15031 1838 aa16.98■□□□□ 0.31
SLC6A8-209ENST00000476466 FOXP2O15409 715 aa16.98■□□□□ 0.31
SLC6A8-209ENST00000476466 GPAA1O43292 621 aa16.98■□□□□ 0.31
SLC6A8-209ENST00000476466 GLRX3O76003 335 aaKnown RBP16.98■□□□□ 0.31
SLC6A8-209ENST00000476466 MTFR1Q15390 333 aa16.98■□□□□ 0.31
SLC6A8-209ENST00000476466 SIAH1Q8IUQ4 282 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms