RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 HMMRO75330 724 aa12.07□□□□□ -0.48
PTPN7-208ENST00000476061 MYCP01106 439 aaPredicted RBP12.07□□□□□ -0.48
PTPN7-208ENST00000476061 DYNLL1P63167 89 aaKnown RBP12.07□□□□□ -0.48
PTPN7-208ENST00000476061 TATDN1Q6P1N9 297 aa12.07□□□□□ -0.48
PTPN7-208ENST00000476061 AACSQ86V21 672 aa12.07□□□□□ -0.48
PTPN7-208ENST00000476061 CLASRPQ8N2M8 674 aaKnown RBP12.07□□□□□ -0.48
PTPN7-208ENST00000476061 MAGEB6Q8N7X4 407 aa12.07□□□□□ -0.48
PTPN7-208ENST00000476061 SHISA4Q96DD7 197 aa12.07□□□□□ -0.48
PTPN7-208ENST00000476061 KIF1BPQ96EK5 621 aa12.07□□□□□ -0.48
PTPN7-208ENST00000476061 RNF208Q9H0X6 261 aa12.07□□□□□ -0.48
PTPN7-208ENST00000476061 ASCC2Q9H1I8 757 aaPredicted RBP12.07□□□□□ -0.48
PTPN7-208ENST00000476061 TMOD4Q9NZQ9 345 aa12.07□□□□□ -0.48
PTPN7-208ENST00000476061 MORF4L1Q9UBU8 362 aa12.07□□□□□ -0.48
PTPN7-208ENST00000476061 CENPFP49454 3210 aa12.06□□□□□ -0.48
PTPN7-208ENST00000476061 MYH7P12883 1935 aa12.06□□□□□ -0.48
PTPN7-208ENST00000476061 MYH8P13535 1937 aa12.06□□□□□ -0.48
PTPN7-208ENST00000476061 USP17L10C9JJH3 530 aa12.06□□□□□ -0.48
PTPN7-208ENST00000476061 SGPL1O95470 568 aa12.06□□□□□ -0.48
PTPN7-208ENST00000476061 JAG1P78504 1218 aa12.06□□□□□ -0.48
PTPN7-208ENST00000476061 MTMR2Q13614 643 aa12.06□□□□□ -0.48
PTPN7-208ENST00000476061 UBE2Q1Q7Z7E8 422 aa12.06□□□□□ -0.48
PTPN7-208ENST00000476061 TTC6Q86TZ1 520 aa12.06□□□□□ -0.48
PTPN7-208ENST00000476061 ANTXR1Q9H6X2 564 aa12.06□□□□□ -0.48
PTPN7-208ENST00000476061 ZBTB40Q9NUA8 1239 aa12.06□□□□□ -0.48
PTPN7-208ENST00000476061 BIN2Q9UBW5 565 aaPredicted RBP12.06□□□□□ -0.48
PTPN7-208ENST00000476061 ZBTB21Q9ULJ3 1066 aa12.06□□□□□ -0.48
PTPN7-208ENST00000476061 RAB11FIP3O75154 756 aa12.05□□□□□ -0.48
PTPN7-208ENST00000476061 USP5P45974 858 aa12.05□□□□□ -0.48
PTPN7-208ENST00000476061 HABP4Q5JVS0 413 aaKnown RBP12.05□□□□□ -0.48
PTPN7-208ENST00000476061 MIGA1Q8NAN2 632 aa12.05□□□□□ -0.48
PTPN7-208ENST00000476061 U2AF1L4Q8WU68 220 aaKnown RBP12.05□□□□□ -0.48
PTPN7-208ENST00000476061 GTF3C2Q8WUA4 911 aaPredicted RBP12.05□□□□□ -0.48
PTPN7-208ENST00000476061 RIOK1Q9BRS2 568 aaKnown RBP12.05□□□□□ -0.48
PTPN7-208ENST00000476061 SERPINB13Q9UIV8 391 aa12.05□□□□□ -0.48
PTPN7-208ENST00000476061 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
PTPN7-208ENST00000476061 GDF11O95390 407 aa12.04□□□□□ -0.48
PTPN7-208ENST00000476061 INHAP05111 366 aa12.04□□□□□ -0.48
PTPN7-208ENST00000476061 IRX3P78415 501 aaPredicted RBP12.04□□□□□ -0.48
PTPN7-208ENST00000476061 C12orf42Q96LP6 360 aa12.04□□□□□ -0.48
PTPN7-208ENST00000476061 HTATIP2Q9BUP3 242 aa12.04□□□□□ -0.48
PTPN7-208ENST00000476061 UNC93B1Q9H1C4 597 aa12.04□□□□□ -0.48
PTPN7-208ENST00000476061 IL1RAPL2Q9NP60 686 aa12.04□□□□□ -0.48
PTPN7-208ENST00000476061 PAK6Q9NQU5 681 aaPredicted RBP12.04□□□□□ -0.48
PTPN7-208ENST00000476061 SAP30BPQ9UHR5 308 aaKnown RBP12.04□□□□□ -0.48
PTPN7-208ENST00000476061 GJD2Q9UKL4 321 aa12.04□□□□□ -0.48
PTPN7-208ENST00000476061 BRCA2P51587 3418 aa12.03□□□□□ -0.48
PTPN7-208ENST00000476061 IFIT2P09913 472 aaKnown RBP12.03□□□□□ -0.48
PTPN7-208ENST00000476061 ELNP15502 786 aa12.03□□□□□ -0.48
PTPN7-208ENST00000476061 HERVK_113P62684 666 aa12.03□□□□□ -0.48
PTPN7-208ENST00000476061 USP17L2Q6R6M4 530 aa12.03□□□□□ -0.48
PTPN7-208ENST00000476061 SIRT2Q8IXJ6 389 aa12.03□□□□□ -0.48
PTPN7-208ENST00000476061 P2RX7Q99572 595 aaKnown RBP12.03□□□□□ -0.48
PTPN7-208ENST00000476061 CRISPLD2Q9H0B8 497 aa12.03□□□□□ -0.48
PTPN7-208ENST00000476061 EMILIN3Q9NT22 766 aa12.03□□□□□ -0.48
PTPN7-208ENST00000476061 COG6Q9Y2V7 657 aa12.03□□□□□ -0.48
PTPN7-208ENST00000476061 NDUFB9Q9Y6M9 179 aa12.03□□□□□ -0.48
PTPN7-208ENST00000476061 MAGEB6P1A0A0J9YX57 407 aa12.02□□□□□ -0.49
PTPN7-208ENST00000476061 GH2P01242 217 aa12.02□□□□□ -0.49
PTPN7-208ENST00000476061 HMGCRP04035 888 aa12.02□□□□□ -0.49
PTPN7-208ENST00000476061 USP14P54578 494 aa12.02□□□□□ -0.49
PTPN7-208ENST00000476061 PDE3AQ14432 1141 aa12.02□□□□□ -0.49
PTPN7-208ENST00000476061 CERKLQ49MI3 558 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-208ENST00000476061 SLC9C2Q5TAH2 1124 aa12.02□□□□□ -0.49
PTPN7-208ENST00000476061 GPRC5AQ8NFJ5 357 aa12.02□□□□□ -0.49
PTPN7-208ENST00000476061 CRNKL1Q9BZJ0 848 aaKnown RBP12.02□□□□□ -0.49
PTPN7-208ENST00000476061 KIAA1683Q9H0B3 1180 aa12.02□□□□□ -0.49
PTPN7-208ENST00000476061 RBPJLQ9UBG7 517 aa12.02□□□□□ -0.49
PTPN7-208ENST00000476061 RCAN3Q9UKA8 241 aa12.02□□□□□ -0.49
PTPN7-208ENST00000476061 TCRBV5S4A2TA0A5A2 114 aa12.01□□□□□ -0.49
PTPN7-208ENST00000476061 FARP2O94887 1054 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-208ENST00000476061 XRCC5P13010 732 aaKnown RBP12.01□□□□□ -0.49
PTPN7-208ENST00000476061 PDE6AP16499 860 aa12.01□□□□□ -0.49
PTPN7-208ENST00000476061 ATP5JP18859 108 aa12.01□□□□□ -0.49
PTPN7-208ENST00000476061 MAPK4P31152 587 aa12.01□□□□□ -0.49
PTPN7-208ENST00000476061 GABPAQ06546 454 aa12.01□□□□□ -0.49
PTPN7-208ENST00000476061 ABCB5Q2M3G0 1257 aa12.01□□□□□ -0.49
PTPN7-208ENST00000476061 SHROOM1Q2M3G4 852 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-208ENST00000476061 TRMT44Q8IYL2 757 aaKnown RBP12.01□□□□□ -0.49
PTPN7-208ENST00000476061 ANKLE1Q8NAG6 615 aa12.01□□□□□ -0.49
PTPN7-208ENST00000476061 SOCS4Q8WXH5 440 aa12.01□□□□□ -0.49
PTPN7-208ENST00000476061 DPF3Q92784 378 aa12.01□□□□□ -0.49
PTPN7-208ENST00000476061 DEFB118Q96PH6 123 aa12.01□□□□□ -0.49
PTPN7-208ENST00000476061 CABP5Q9NP86 173 aa12.01□□□□□ -0.49
PTPN7-208ENST00000476061 RPTORQ8N122 1335 aa12.01□□□□□ -0.49
PTPN7-208ENST00000476061 ZNF532Q9HCE3 1301 aa12.01□□□□□ -0.49
PTPN7-208ENST00000476061 ALPK3Q96L96 1907 aa12□□□□□ -0.49
PTPN7-208ENST00000476061 BAZ2AQ9UIF9 1905 aaKnown RBP12□□□□□ -0.49
PTPN7-208ENST00000476061 USP17L15C9J2P7 530 aa12□□□□□ -0.49
PTPN7-208ENST00000476061 USP17L13C9JLJ4 530 aa12□□□□□ -0.49
PTPN7-208ENST00000476061 USP17L11C9JVI0 530 aa12□□□□□ -0.49
PTPN7-208ENST00000476061 USP17L18D6R9N7 530 aa12□□□□□ -0.49
PTPN7-208ENST00000476061 USP17L22D6RA61 530 aa12□□□□□ -0.49
PTPN7-208ENST00000476061 USP17L17D6RBQ6 530 aa12□□□□□ -0.49
PTPN7-208ENST00000476061 USP17L19D6RCP7 530 aa12□□□□□ -0.49
PTPN7-208ENST00000476061 USP17L20D6RJB6 530 aa12□□□□□ -0.49
PTPN7-208ENST00000476061 H0YGN5 161 aa12□□□□□ -0.49
PTPN7-208ENST00000476061 GOLIM4O00461 696 aa12□□□□□ -0.49
PTPN7-208ENST00000476061 TFRCP02786 760 aaKnown RBP12□□□□□ -0.49
PTPN7-208ENST00000476061 POLR3DP05423 398 aaPredicted RBP12□□□□□ -0.49
PTPN7-208ENST00000476061 SHMT1P34896 483 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms