RNA–Protein interactions for RNA: ENST00000476016.1

GABRE-207, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 4

Gene GABRE, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-207ENST00000476016 CNTNAP1P78357 1384 aa9.57□□□□□ -0.88
GABRE-207ENST00000476016 DDTLA6NHG4 134 aaPredicted RBP9.56□□□□□ -0.88
GABRE-207ENST00000476016 IFIT3O14879 490 aaKnown RBP9.56□□□□□ -0.88
GABRE-207ENST00000476016 POLR3DP05423 398 aaPredicted RBP9.56□□□□□ -0.88
GABRE-207ENST00000476016 FDPSP14324 419 aaKnown RBP9.56□□□□□ -0.88
GABRE-207ENST00000476016 SHMT1P34896 483 aa9.56□□□□□ -0.88
GABRE-207ENST00000476016 FUT2Q10981 343 aa9.56□□□□□ -0.88
GABRE-207ENST00000476016 SART3Q15020 963 aaKnown RBP9.56□□□□□ -0.88
GABRE-207ENST00000476016 DLGAP5Q15398 846 aa9.56□□□□□ -0.88
GABRE-207ENST00000476016 TMEM67Q5HYA8 995 aa9.56□□□□□ -0.88
GABRE-207ENST00000476016 AMOTL1Q8IY63 956 aa9.56□□□□□ -0.88
GABRE-207ENST00000476016 NSUN7Q8NE18 718 aaKnown RBP9.56□□□□□ -0.88
GABRE-207ENST00000476016 FBXW7Q969H0 707 aa9.56□□□□□ -0.88
GABRE-207ENST00000476016 DYNLL2Q96FJ2 89 aa9.56□□□□□ -0.88
GABRE-207ENST00000476016 CCDC17Q96LX7 622 aa9.56□□□□□ -0.88
GABRE-207ENST00000476016 SLKQ9H2G2 1235 aaPredicted RBP9.56□□□□□ -0.88
GABRE-207ENST00000476016 DNAJC18Q9H819 358 aa9.56□□□□□ -0.88
GABRE-207ENST00000476016 MYOZ2Q9NPC6 264 aa9.56□□□□□ -0.88
GABRE-207ENST00000476016 MYH4Q9Y623 1939 aa9.56□□□□□ -0.88
GABRE-207ENST00000476016 TNKSO95271 1327 aa9.56□□□□□ -0.88
GABRE-207ENST00000476016 ZNF541Q9H0D2 1346 aa9.56□□□□□ -0.88
GABRE-207ENST00000476016 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
GABRE-207ENST00000476016 KLF18A0A0U1RQI7 1052 aa9.55□□□□□ -0.88
GABRE-207ENST00000476016 DHX16O60231 1041 aaKnown RBP9.55□□□□□ -0.88
GABRE-207ENST00000476016 SYT1P21579 422 aa9.55□□□□□ -0.88
GABRE-207ENST00000476016 EIF6P56537 245 aaKnown RBP9.55□□□□□ -0.88
GABRE-207ENST00000476016 TFAP4Q01664 338 aa9.55□□□□□ -0.88
GABRE-207ENST00000476016 PKP1Q13835 747 aa9.55□□□□□ -0.88
GABRE-207ENST00000476016 ARHGAP27Q6ZUM4 889 aa9.55□□□□□ -0.88
GABRE-207ENST00000476016 IQCA1Q86XH1 822 aa9.55□□□□□ -0.88
GABRE-207ENST00000476016 CCDC83Q8IWF9 413 aa9.55□□□□□ -0.88
GABRE-207ENST00000476016 FANCBQ8NB91 859 aa9.55□□□□□ -0.88
GABRE-207ENST00000476016 SLC44A5Q8NCS7 719 aa9.55□□□□□ -0.88
GABRE-207ENST00000476016 MKL1Q969V6 931 aa9.55□□□□□ -0.88
GABRE-207ENST00000476016 TEPSINQ96N21 525 aa9.55□□□□□ -0.88
GABRE-207ENST00000476016 GPRC5DQ9NZD1 345 aa9.55□□□□□ -0.88
GABRE-207ENST00000476016 SAP30BPQ9UHR5 308 aaKnown RBP9.55□□□□□ -0.88
GABRE-207ENST00000476016 CNOT7Q9UIV1 285 aaKnown RBP9.55□□□□□ -0.88
GABRE-207ENST00000476016 BAZ2BQ9UIF8 2168 aaKnown RBP9.54□□□□□ -0.88
GABRE-207ENST00000476016 SCN4AP35499 1836 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 SHTN1A0MZ66 631 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 SOCS7O14512 581 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 RANBP6O60518 1105 aaKnown RBP9.54□□□□□ -0.88
GABRE-207ENST00000476016 PRDM1O75626 825 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 EGFRP00533 1210 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 HSP90AA1P07900 732 aaKnown RBP9.54□□□□□ -0.88
GABRE-207ENST00000476016 IFNAR1P17181 557 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 SMARCA1P28370 1054 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 CDC27P30260 824 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 GMPSP49915 693 aaPredicted RBP9.54□□□□□ -0.88
GABRE-207ENST00000476016 HMGN5P82970 282 aaKnown RBP9.54□□□□□ -0.88
GABRE-207ENST00000476016 WTAPQ15007 396 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 NBPF9Q3BBW0 867 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 NBPF11Q86T75 865 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 SIAH1Q8IUQ4 282 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 ZNF444Q8N0Y2 327 aaPredicted RBP9.54□□□□□ -0.88
GABRE-207ENST00000476016 KLHL34Q8N239 644 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 SPRYD3Q8NCJ5 442 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 L3MBTL3Q96JM7 780 aaPredicted RBP9.54□□□□□ -0.88
GABRE-207ENST00000476016 UBAC1Q9BSL1 405 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 HERC5Q9UII4 1024 aaKnown RBP9.54□□□□□ -0.88
GABRE-207ENST00000476016 SYNPO2Q9UMS6 1093 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 SLC12A7Q9Y666 1083 aa9.54□□□□□ -0.88
GABRE-207ENST00000476016 MYH15Q9Y2K3 1946 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 CCDC196A0A1B0GTZ2 297 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 ZBTB43O43298 467 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 NMT2O60551 498 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 DDAH1O94760 285 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 CALM1P0DP23 149 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 CALM2P0DP24 149 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 CALM3P0DP25 149 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 SNHG28P0DPA3 235 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 PDCP20941 246 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 GJB2P29033 226 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 ADD1P35611 737 aaKnown RBP9.53□□□□□ -0.88
GABRE-207ENST00000476016 CACNB3P54284 484 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 FGD1P98174 961 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 FAM47AQ5JRC9 791 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 RRP12Q5JTH9 1297 aaKnown RBP9.53□□□□□ -0.88
GABRE-207ENST00000476016 NOL8Q76FK4 1167 aaKnown RBP9.53□□□□□ -0.88
GABRE-207ENST00000476016 ZNF654Q8IZM8 581 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 TNPO1Q92973 898 aaKnown RBP9.53□□□□□ -0.88
GABRE-207ENST00000476016 ZKSCAN3Q9BRR0 538 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 MKNK2Q9HBH9 465 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 NCOA5Q9HCD5 579 aaKnown RBP9.53□□□□□ -0.88
GABRE-207ENST00000476016 MTMR4Q9NYA4 1195 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 SMC3Q9UQE7 1217 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 MTMR6Q9Y217 621 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 STK36Q9NRP7 1315 aa9.53□□□□□ -0.88
GABRE-207ENST00000476016 ERICH2A1L162 156 aa9.52□□□□□ -0.89
GABRE-207ENST00000476016 PALM3A6NDB9 673 aaPredicted RBP9.52□□□□□ -0.89
GABRE-207ENST00000476016 TSPY2A6NKD2 308 aa9.52□□□□□ -0.89
GABRE-207ENST00000476016 STX6O43752 255 aa9.52□□□□□ -0.89
GABRE-207ENST00000476016 GRIN3BO60391 1043 aa9.52□□□□□ -0.89
GABRE-207ENST00000476016 JAK2O60674 1132 aa9.52□□□□□ -0.89
GABRE-207ENST00000476016 HLA-DOAP06340 250 aa9.52□□□□□ -0.89
GABRE-207ENST00000476016 GUCY1A2P33402 732 aa9.52□□□□□ -0.89
GABRE-207ENST00000476016 RBM5P52756 815 aaKnown RBP eCLIP9.52□□□□□ -0.896e-8■■■□□ 16
GABRE-207ENST00000476016 HIRAP54198 1017 aaPredicted RBP9.52□□□□□ -0.89
GABRE-207ENST00000476016 PICALMQ13492 652 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms