RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 IGF2BP3O00425 579 aaKnown RBP eCLIP8.34□□□□□ -1.07
SHQ1-207ENST00000475558 MYO1BO43795 1136 aa8.34□□□□□ -1.07
SHQ1-207ENST00000475558 PCP11498 1178 aaKnown RBP8.34□□□□□ -1.07
SHQ1-207ENST00000475558 PDIA4P13667 645 aaKnown RBP8.34□□□□□ -1.07
SHQ1-207ENST00000475558 PDE6AP16499 860 aa8.34□□□□□ -1.07
SHQ1-207ENST00000475558 CYP7A1P22680 504 aa8.34□□□□□ -1.07
SHQ1-207ENST00000475558 PPP4CP60510 307 aa8.34□□□□□ -1.07
SHQ1-207ENST00000475558 SP3Q02447 781 aa8.34□□□□□ -1.07
SHQ1-207ENST00000475558 ANKRD1Q15327 319 aa8.34□□□□□ -1.07
SHQ1-207ENST00000475558 IMMTQ16891 758 aaKnown RBP8.34□□□□□ -1.07
SHQ1-207ENST00000475558 MAGEB6Q8N7X4 407 aa8.34□□□□□ -1.07
SHQ1-207ENST00000475558 CD99L2Q8TCZ2 262 aa8.34□□□□□ -1.07
SHQ1-207ENST00000475558 ARMC5Q96C12 935 aa8.34□□□□□ -1.07
SHQ1-207ENST00000475558 ALDH8A1Q9H2A2 487 aaPredicted RBP8.34□□□□□ -1.07
SHQ1-207ENST00000475558 ANTXR1Q9H6X2 564 aa8.34□□□□□ -1.07
SHQ1-207ENST00000475558 EFCC1Q9HA90 598 aa8.34□□□□□ -1.07
SHQ1-207ENST00000475558 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.34□□□□□ -1.07
SHQ1-207ENST00000475558 MYH3P11055 1940 aa8.34□□□□□ -1.07
SHQ1-207ENST00000475558 ZNF532Q9HCE3 1301 aa8.33□□□□□ -1.08
SHQ1-207ENST00000475558 IRS2Q9Y4H2 1338 aa8.33□□□□□ -1.08
SHQ1-207ENST00000475558 RBBP6Q7Z6E9 1792 aaKnown RBP8.33□□□□□ -1.08
SHQ1-207ENST00000475558 MKI67P46013 3256 aaKnown RBP8.33□□□□□ -1.08
SHQ1-207ENST00000475558 MAGEB6P1A0A0J9YX57 407 aa8.33□□□□□ -1.08
SHQ1-207ENST00000475558 TESPA1A2RU30 521 aaPredicted RBP8.33□□□□□ -1.08
SHQ1-207ENST00000475558 SNAP23O00161 211 aa8.33□□□□□ -1.08
SHQ1-207ENST00000475558 SLC3A2P08195 630 aaKnown RBP8.33□□□□□ -1.08
SHQ1-207ENST00000475558 EN2P19622 333 aaPredicted RBP8.33□□□□□ -1.08
SHQ1-207ENST00000475558 IREB2P48200 963 aaKnown RBP8.33□□□□□ -1.08
SHQ1-207ENST00000475558 CRHR2Q13324 411 aa8.33□□□□□ -1.08
SHQ1-207ENST00000475558 NBPF11Q86T75 865 aa8.33□□□□□ -1.08
SHQ1-207ENST00000475558 DZIP1Q86YF9 867 aaKnown RBP8.33□□□□□ -1.08
SHQ1-207ENST00000475558 AMOTL1Q8IY63 956 aa8.33□□□□□ -1.08
SHQ1-207ENST00000475558 ANKRD13AQ8IZ07 590 aa8.33□□□□□ -1.08
SHQ1-207ENST00000475558 CLMNQ96JQ2 1002 aa8.33□□□□□ -1.08
SHQ1-207ENST00000475558 FAM227BQ96M60 508 aa8.33□□□□□ -1.08
SHQ1-207ENST00000475558 STRBPQ96SI9 672 aaKnown RBP8.33□□□□□ -1.08
SHQ1-207ENST00000475558 PIH1D3Q9NQM4 214 aaKnown RBP8.33□□□□□ -1.08
SHQ1-207ENST00000475558 ATP8A2Q9NTI2 1148 aa8.33□□□□□ -1.08
SHQ1-207ENST00000475558 FZD1Q9UP38 647 aa8.33□□□□□ -1.08
SHQ1-207ENST00000475558 ZNF646O15015 1829 aaPredicted RBP8.33□□□□□ -1.08
SHQ1-207ENST00000475558 SPEF2Q9C093 1822 aa8.32□□□□□ -1.08
SHQ1-207ENST00000475558 A0A0D9SFI3 127 aa8.32□□□□□ -1.08
SHQ1-207ENST00000475558 TCRBV5S4A2TA0A5A2 114 aa8.32□□□□□ -1.08
SHQ1-207ENST00000475558 ZNF213O14771 459 aa8.32□□□□□ -1.08
SHQ1-207ENST00000475558 GPAA1O43292 621 aa8.32□□□□□ -1.08
SHQ1-207ENST00000475558 USP2O75604 605 aaPredicted RBP8.32□□□□□ -1.08
SHQ1-207ENST00000475558 APPP05067 770 aa8.32□□□□□ -1.08
SHQ1-207ENST00000475558 HSPD1P10809 573 aaKnown RBP8.32□□□□□ -1.08
SHQ1-207ENST00000475558 FXR1P51114 621 aaKnown RBP eCLIP8.32□□□□□ -1.08
SHQ1-207ENST00000475558 TRDNQ13061 729 aa8.32□□□□□ -1.08
SHQ1-207ENST00000475558 HHIPL2Q6UWX4 724 aa8.32□□□□□ -1.08
SHQ1-207ENST00000475558 HSCBQ8IWL3 235 aa8.32□□□□□ -1.08
SHQ1-207ENST00000475558 KHSRPQ92945 711 aaKnown RBP eCLIP8.32□□□□□ -1.081e-6■□□□□ 9.8
SHQ1-207ENST00000475558 OSBP2Q969R2 916 aa8.32□□□□□ -1.08
SHQ1-207ENST00000475558 NSUN4Q96CB9 384 aaKnown RBP8.32□□□□□ -1.08
SHQ1-207ENST00000475558 EDC3Q96F86 508 aaKnown RBP8.32□□□□□ -1.08
SHQ1-207ENST00000475558 MTA3Q9BTC8 594 aa8.32□□□□□ -1.08
SHQ1-207ENST00000475558 CRNKL1Q9BZJ0 848 aaKnown RBP8.32□□□□□ -1.08
SHQ1-207ENST00000475558 RNF41Q9H4P4 317 aaPredicted RBP8.32□□□□□ -1.08
SHQ1-207ENST00000475558 ZNF287Q9HBT7 754 aa8.32□□□□□ -1.08
SHQ1-207ENST00000475558 RBM8AQ9Y5S9 174 aaKnown RBP8.32□□□□□ -1.08
SHQ1-207ENST00000475558 CYP46A1Q9Y6A2 500 aa8.32□□□□□ -1.08
SHQ1-207ENST00000475558 ZMYM6O95789 1325 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 LAMB1P07942 1786 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 KLRK1P26718 216 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 CHAF1AQ13111 956 aaPredicted RBP8.31□□□□□ -1.08
SHQ1-207ENST00000475558 CFAP100Q494V2 611 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 MFSD14BQ5SR56 506 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 NBPF12Q5TAG4 269 aaPredicted RBP8.31□□□□□ -1.08
SHQ1-207ENST00000475558 CREB3L3Q68CJ9 461 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 TMTC2Q8N394 836 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 CERS5Q8N5B7 392 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 ZNF333Q96JL9 665 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 PRMT6Q96LA8 375 aaPredicted RBP8.31□□□□□ -1.08
SHQ1-207ENST00000475558 ZSCAN31Q96LW9 406 aaPredicted RBP8.31□□□□□ -1.08
SHQ1-207ENST00000475558 PTPN18Q99952 460 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 PUS7LQ9H0K6 701 aaKnown RBP8.31□□□□□ -1.08
SHQ1-207ENST00000475558 CNNM2Q9H8M5 875 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 STK24Q9Y6E0 443 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 HTTP42858 3142 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 ECM29Q5VYK3 1845 aa8.31□□□□□ -1.08
SHQ1-207ENST00000475558 CEP290O15078 2479 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 GPR75-ASB3A0A0A6YYF3 556 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 CLRN2A0PK11 232 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 SLC27A2O14975 620 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 WDHD1O75717 1129 aaPredicted RBP8.3□□□□□ -1.08
SHQ1-207ENST00000475558 FGAP02671 866 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 GJA5P36382 358 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 NEK4P51957 841 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 RBM5P52756 815 aaKnown RBP eCLIP8.3□□□□□ -1.08
SHQ1-207ENST00000475558 MECOMQ03112 1051 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 TNFAIP1Q13829 316 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 RASA3Q14644 834 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 SLC4A8Q2Y0W8 1093 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 SLC9C1Q4G0N8 1177 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 CCDC178Q5BJE1 867 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 VPS53Q5VIR6 699 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 BLOC1S2Q6QNY1 142 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 FBXL16Q8N461 479 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 NEK1Q96PY6 1258 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms