RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 APPBP2Q92624 585 aa20.14■□□□□ 0.82
CCM2-207ENST00000475551 SPECC1Q5M775 1068 aa20.14■□□□□ 0.81
CCM2-207ENST00000475551 CNGA4Q8IV77 575 aa20.14■□□□□ 0.81
CCM2-207ENST00000475551 ADD3Q9UEY8 706 aaKnown RBP20.14■□□□□ 0.81
CCM2-207ENST00000475551 FBXO2Q9UK22 296 aaPredicted RBP20.14■□□□□ 0.81
CCM2-207ENST00000475551 SPATA31A6Q5VVP1 1343 aa20.14■□□□□ 0.81
CCM2-207ENST00000475551 ARFGEF2Q9Y6D5 1785 aa20.13■□□□□ 0.81
CCM2-207ENST00000475551 SH2B2O14492 632 aaPredicted RBP20.13■□□□□ 0.81
CCM2-207ENST00000475551 FKBP4Q02790 459 aaKnown RBP eCLIP20.13■□□□□ 0.81
CCM2-207ENST00000475551 NTRK3Q16288 839 aa20.13■□□□□ 0.81
CCM2-207ENST00000475551 TAF7LQ5H9L4 462 aa20.13■□□□□ 0.81
CCM2-207ENST00000475551 SPATA1Q5VX52 437 aa20.13■□□□□ 0.81
CCM2-207ENST00000475551 ZNF579Q8NAF0 562 aaKnown RBP20.13■□□□□ 0.81
CCM2-207ENST00000475551 PHKBQ93100 1093 aa20.13■□□□□ 0.81
CCM2-207ENST00000475551 CTAGE1Q96RT6 745 aa20.13■□□□□ 0.81
CCM2-207ENST00000475551 LRP6O75581 1613 aa20.13■□□□□ 0.81
CCM2-207ENST00000475551 PHACTR2O75167 634 aa20.13■□□□□ 0.81
CCM2-207ENST00000475551 CIAO1O76071 339 aa20.13■□□□□ 0.81
CCM2-207ENST00000475551 SNRPA1P09661 255 aaKnown RBP20.13■□□□□ 0.81
CCM2-207ENST00000475551 IARSP41252 1262 aaKnown RBP20.13■□□□□ 0.81
CCM2-207ENST00000475551 APOA5Q6Q788 366 aa20.13■□□□□ 0.81
CCM2-207ENST00000475551 PLBD2Q8NHP8 589 aa20.13■□□□□ 0.81
CCM2-207ENST00000475551 AFAP1L1Q8TED9 768 aa20.13■□□□□ 0.81
CCM2-207ENST00000475551 ZNF496Q96IT1 587 aaPredicted RBP20.13■□□□□ 0.81
CCM2-207ENST00000475551 WWC3Q9ULE0 1092 aa20.13■□□□□ 0.81
CCM2-207ENST00000475551 SEMA3EO15041 775 aa20.12■□□□□ 0.81
CCM2-207ENST00000475551 RNF40O75150 1001 aa20.12■□□□□ 0.81
CCM2-207ENST00000475551 LRRC24Q50LG9 513 aa20.12■□□□□ 0.81
CCM2-207ENST00000475551 TMTC1Q8IUR5 882 aa20.12■□□□□ 0.81
CCM2-207ENST00000475551 NOSTRINQ8IVI9 506 aa20.12■□□□□ 0.81
CCM2-207ENST00000475551 CDC5LQ99459 802 aaKnown RBP20.12■□□□□ 0.81
CCM2-207ENST00000475551 BTG4Q9NY30 223 aa20.12■□□□□ 0.81
CCM2-207ENST00000475551 ITIH6Q6UXX5 1313 aa20.12■□□□□ 0.81
CCM2-207ENST00000475551 WDR17Q8IZU2 1322 aa20.12■□□□□ 0.81
CCM2-207ENST00000475551 PRPF6O94906 941 aaKnown RBP20.12■□□□□ 0.81
CCM2-207ENST00000475551 SYF2O95926 243 aaKnown RBP20.12■□□□□ 0.81
CCM2-207ENST00000475551 ATP2B1P20020 1258 aa20.12■□□□□ 0.81
CCM2-207ENST00000475551 AMPD2Q01433 879 aa20.12■□□□□ 0.81
CCM2-207ENST00000475551 NOA1Q8NC60 698 aaKnown RBP20.12■□□□□ 0.81
CCM2-207ENST00000475551 CPLX3Q8WVH0 158 aa20.12■□□□□ 0.81
CCM2-207ENST00000475551 COL14A1Q05707 1796 aaKnown RBP20.11■□□□□ 0.81
CCM2-207ENST00000475551 ACTN4O43707 911 aaKnown RBP20.11■□□□□ 0.81
CCM2-207ENST00000475551 CSB-PGBD3P0DP91 1061 aa20.11■□□□□ 0.81
CCM2-207ENST00000475551 DNAJC21Q5F1R6 531 aaKnown RBP20.11■□□□□ 0.81
CCM2-207ENST00000475551 SUGP1Q8IWZ8 645 aaKnown RBP20.11■□□□□ 0.81
CCM2-207ENST00000475551 PUS7LQ9H0K6 701 aaKnown RBP20.11■□□□□ 0.81
CCM2-207ENST00000475551 MYO6Q9UM54 1294 aa20.11■□□□□ 0.81
CCM2-207ENST00000475551 STK36Q9NRP7 1315 aa20.11■□□□□ 0.81
CCM2-207ENST00000475551 TFRCP02786 760 aaKnown RBP20.11■□□□□ 0.81
CCM2-207ENST00000475551 MCM3P25205 808 aa20.11■□□□□ 0.81
CCM2-207ENST00000475551 CASP14P31944 242 aa20.11■□□□□ 0.81
CCM2-207ENST00000475551 FILIP1LQ4L180 1135 aa20.11■□□□□ 0.81
CCM2-207ENST00000475551 CDKAL1Q5VV42 579 aa20.11■□□□□ 0.81
CCM2-207ENST00000475551 CCDC148Q8NFR7 591 aa20.11■□□□□ 0.81
CCM2-207ENST00000475551 STRN4Q9NRL3 753 aa20.11■□□□□ 0.81
CCM2-207ENST00000475551 UBN2Q6ZU65 1347 aa20.11■□□□□ 0.81
CCM2-207ENST00000475551 RANBP6O60518 1105 aaKnown RBP20.1■□□□□ 0.81
CCM2-207ENST00000475551 ARHGAP25P42331 645 aa20.1■□□□□ 0.81
CCM2-207ENST00000475551 TOB1P50616 345 aaPredicted RBP20.1■□□□□ 0.81
CCM2-207ENST00000475551 GRIN1Q05586 938 aa20.1■□□□□ 0.81
CCM2-207ENST00000475551 CYB5R4Q7L1T6 521 aa20.1■□□□□ 0.81
CCM2-207ENST00000475551 ZBTB9Q96C00 473 aa20.1■□□□□ 0.81
CCM2-207ENST00000475551 NBPF3Q9H094 633 aa20.1■□□□□ 0.81
CCM2-207ENST00000475551 FAM107BQ9H098 131 aa20.1■□□□□ 0.81
CCM2-207ENST00000475551 ECM29Q5VYK3 1845 aa20.1■□□□□ 0.81
CCM2-207ENST00000475551 COL5A2P05997 1499 aaPredicted RBP20.1■□□□□ 0.81
CCM2-207ENST00000475551 A0A087WUV0 522 aaPredicted RBP20.1■□□□□ 0.81
CCM2-207ENST00000475551 GPAA1O43292 621 aa20.1■□□□□ 0.81
CCM2-207ENST00000475551 GYPCP04921 128 aa20.1■□□□□ 0.81
CCM2-207ENST00000475551 RXRAP19793 462 aa20.1■□□□□ 0.81
CCM2-207ENST00000475551 PIP4K2AP48426 406 aaPredicted RBP20.1■□□□□ 0.81
CCM2-207ENST00000475551 GRAMD1CQ8IYS0 662 aa20.1■□□□□ 0.81
CCM2-207ENST00000475551 ACRBPQ8NEB7 543 aa20.1■□□□□ 0.81
CCM2-207ENST00000475551 KDM6AO15550 1401 aaPredicted RBP20.09■□□□□ 0.81
CCM2-207ENST00000475551 ZBTB43O43298 467 aa20.09■□□□□ 0.81
CCM2-207ENST00000475551 MAP9Q49MG5 647 aa20.09■□□□□ 0.81
CCM2-207ENST00000475551 TMEM87BQ96K49 555 aa20.09■□□□□ 0.81
CCM2-207ENST00000475551 C8orf37Q96NL8 207 aa20.09■□□□□ 0.81
CCM2-207ENST00000475551 EIF5P55010 431 aaKnown RBP20.09■□□□□ 0.81
CCM2-207ENST00000475551 CUL4BQ13620 913 aa20.09■□□□□ 0.81
CCM2-207ENST00000475551 RILPL1Q5EBL4 403 aa20.09■□□□□ 0.81
CCM2-207ENST00000475551 TADA2BQ86TJ2 420 aa20.09■□□□□ 0.81
CCM2-207ENST00000475551 DEF6Q9H4E7 631 aa20.09■□□□□ 0.81
CCM2-207ENST00000475551 SEC31BQ9NQW1 1179 aa20.09■□□□□ 0.81
CCM2-207ENST00000475551 FAM217BQ9NTX9 383 aaPredicted RBP20.09■□□□□ 0.81
CCM2-207ENST00000475551 SRPRBQ9Y5M8 271 aaKnown RBP20.09■□□□□ 0.81
CCM2-207ENST00000475551 SYNRGQ9UMZ2 1314 aa20.08■□□□□ 0.81
CCM2-207ENST00000475551 FXR1P51114 621 aaKnown RBP eCLIP20.08■□□□□ 0.81
CCM2-207ENST00000475551 USP14P54578 494 aa20.08■□□□□ 0.81
CCM2-207ENST00000475551 EVA1CP58658 441 aa20.08■□□□□ 0.81
CCM2-207ENST00000475551 MICU3Q86XE3 530 aa20.08■□□□□ 0.81
CCM2-207ENST00000475551 WASF1Q92558 559 aa20.08■□□□□ 0.81
CCM2-207ENST00000475551 NLRP2Q9NX02 1062 aa20.08■□□□□ 0.81
CCM2-207ENST00000475551 SCN11AQ9UI33 1791 aa20.08■□□□□ 0.8
CCM2-207ENST00000475551 ABCC12Q96J65 1359 aa20.08■□□□□ 0.8
CCM2-207ENST00000475551 PLCH1Q4KWH8 1693 aa20.08■□□□□ 0.8
CCM2-207ENST00000475551 ABL1P00519 1130 aa20.08■□□□□ 0.8
CCM2-207ENST00000475551 ERVK-24P63145 666 aa20.08■□□□□ 0.8
CCM2-207ENST00000475551 SSRP1Q08945 709 aaKnown RBP20.08■□□□□ 0.8
CCM2-207ENST00000475551 SGMS1Q86VZ5 419 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms