RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 IRF5Q13568 498 aa8.57□□□□□ -1.04
HDAC3-207ENST00000475549 Q3C1V9 767 aa8.57□□□□□ -1.04
HDAC3-207ENST00000475549 SLFNL1Q499Z3 407 aa8.57□□□□□ -1.04
HDAC3-207ENST00000475549 TATDN1Q6P1N9 297 aa8.57□□□□□ -1.04
HDAC3-207ENST00000475549 RPAP2Q8IXW5 612 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-207ENST00000475549 PXYLP1Q8TE99 480 aa8.57□□□□□ -1.04
HDAC3-207ENST00000475549 U2AF1L4Q8WU68 220 aaKnown RBP8.57□□□□□ -1.04
HDAC3-207ENST00000475549 EDC3Q96F86 508 aaKnown RBP8.57□□□□□ -1.04
HDAC3-207ENST00000475549 NOL10Q9BSC4 688 aaKnown RBP8.57□□□□□ -1.04
HDAC3-207ENST00000475549 EMILIN3Q9NT22 766 aa8.57□□□□□ -1.04
HDAC3-207ENST00000475549 RBPJLQ9UBG7 517 aa8.57□□□□□ -1.04
HDAC3-207ENST00000475549 ZBTB21Q9ULJ3 1066 aa8.57□□□□□ -1.04
HDAC3-207ENST00000475549 MYH2Q9UKX2 1941 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 SZT2Q5T011 3432 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 TCRBV5S4A2TA0A5A2 114 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 USP17L10C9JJH3 530 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 APBB1O00213 710 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 SGPL1O95470 568 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 GH2P01242 217 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 INHAP05111 366 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 GUCY1A2P33402 732 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 GCLCP48506 637 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-207ENST00000475549 MAP3K12Q12852 859 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 TRIM32Q13049 653 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 ERC1Q8IUD2 1116 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 CRACR2BQ8N4Y2 399 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-207ENST00000475549 SLAIN1Q8ND83 568 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 TBC1D2Q9BYX2 928 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 PAK6Q9NQU5 681 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-207ENST00000475549 MORF4L1Q9UBU8 362 aa8.56□□□□□ -1.04
HDAC3-207ENST00000475549 BIN2Q9UBW5 565 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-207ENST00000475549 COLQQ9Y215 455 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-207ENST00000475549 MYH13Q9UKX3 1938 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 C19orf81C9J6K1 198 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 SMIM22K7EJ46 135 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 PDE6AP16499 860 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 SHMT1P34896 483 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 USP5P45974 858 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 HERVK_113P62684 666 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 UBXN2AP68543 259 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 GABPAQ06546 454 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 SLC9C2Q5TAH2 1124 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 NKX2-3Q8TAU0 364 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 ACER1Q8TDN7 264 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 COA7Q96BR5 231 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 DEFB118Q96PH6 123 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 CRISPLD2Q9H0B8 497 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 EHD4Q9H223 541 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 AS3MTQ9HBK9 375 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 SERPINB13Q9UIV8 391 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 RCAN3Q9UKA8 241 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 PNMA3Q9UL41 463 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 DDX19BQ9UMR2 479 aa8.55□□□□□ -1.04
HDAC3-207ENST00000475549 ZNF532Q9HCE3 1301 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 MAGEB6P1A0A0J9YX57 407 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 GOLIM4O00461 696 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 PRKAB2O43741 272 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 CNMDO75829 334 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 HLA-DOAP06340 250 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 CYP2D6P10635 497 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 MNX1P50219 401 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-207ENST00000475549 FXR1P51114 621 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDAC3-207ENST00000475549 PABPC4Q13310 644 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDAC3-207ENST00000475549 HSP90AB4PQ58FF6 505 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 SIAH1Q8IUQ4 282 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 CLASRPQ8N2M8 674 aaKnown RBP8.54□□□□□ -1.04
HDAC3-207ENST00000475549 GPRC5AQ8NFJ5 357 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDAC3-207ENST00000475549 USP6NLQ92738 828 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 GCC1Q96CN9 775 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 KIF1BPQ96EK5 621 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 BCL11AQ9H165 835 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 PORCNQ9H237 461 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 DCP1AQ9NPI6 582 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-207ENST00000475549 GINM1Q9NU53 330 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 TMOD4Q9NZQ9 345 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 TAOK2Q9UL54 1235 aa8.54□□□□□ -1.04
HDAC3-207ENST00000475549 PHIPQ8WWQ0 1821 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 DOCK2Q92608 1830 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 A0A1W2PRG0 241 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 MS4A1P11836 297 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 IRX3P78415 501 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-207ENST00000475549 RAB3GAP1Q15042 981 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 TTF1Q15361 905 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-207ENST00000475549 CERKLQ49MI3 558 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-207ENST00000475549 KIAA1755Q5JYT7 1200 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 MAP3K21Q5TCX8 1036 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 TMED8Q6PL24 325 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-207ENST00000475549 USP17L2Q6R6M4 530 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 TTC6Q86TZ1 520 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 CERS3Q8IU89 383 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 LCORLQ8N3X6 602 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 SLC44A5Q8NCS7 719 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 DIS3LQ8TF46 1054 aaKnown RBP8.53□□□□□ -1.04
HDAC3-207ENST00000475549 SDR42E1Q8WUS8 393 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 TRIB2Q92519 343 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 DPF3Q92784 378 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 C12orf42Q96LP6 360 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 DNAJC2Q99543 621 aaKnown RBP8.53□□□□□ -1.04
HDAC3-207ENST00000475549 TRIM34Q9BYJ4 488 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms