RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.79■□□□□ 0.44
RPUSD3-215ENST00000475470 A0A1W2PQ27 194 aa17.79■□□□□ 0.44
RPUSD3-215ENST00000475470 A0A1W2PQ64 194 aa17.79■□□□□ 0.44
RPUSD3-215ENST00000475470 A0A1W2PQD8 194 aa17.79■□□□□ 0.44
RPUSD3-215ENST00000475470 NMT2O60551 498 aa17.79■□□□□ 0.44
RPUSD3-215ENST00000475470 FAM160A1Q05DH4 1040 aa17.79■□□□□ 0.44
RPUSD3-215ENST00000475470 MRPS27Q92552 414 aaKnown RBP17.79■□□□□ 0.44
RPUSD3-215ENST00000475470 RNF26Q9BY78 433 aaPredicted RBP17.79■□□□□ 0.44
RPUSD3-215ENST00000475470 ZC3H12CQ9C0D7 883 aaKnown RBP17.79■□□□□ 0.44
RPUSD3-215ENST00000475470 COA1Q9GZY4 146 aa17.79■□□□□ 0.44
RPUSD3-215ENST00000475470 LTBP1Q14766 1721 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 GPR75-ASB3A0A0A6YYF3 556 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 KINO60870 393 aaKnown RBP17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 MMP1P03956 469 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 TROAPQ12815 778 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 SASS6Q6UVJ0 657 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 MAPKAPK5Q8IW41 473 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 MASTLQ96GX5 879 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 MKNK2Q9HBH9 465 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 RRAGDQ9NQL2 400 aaPredicted RBP17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 DLEC1Q9Y238 1755 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 FAM205AQ6ZU69 1335 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 CTAGE5O15320 804 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 PLCG2P16885 1265 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 NT5C2P49902 561 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 GTF2IP78347 998 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 SNW1Q13573 536 aaKnown RBP17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 KCNJ14Q9UNX9 436 aa17.78■□□□□ 0.44
RPUSD3-215ENST00000475470 TFAP4Q01664 338 aa17.77■□□□□ 0.44
RPUSD3-215ENST00000475470 DPP8Q6V1X1 898 aaPredicted RBP17.77■□□□□ 0.44
RPUSD3-215ENST00000475470 ENGASEQ8NFI3 743 aa17.77■□□□□ 0.44
RPUSD3-215ENST00000475470 DYNLL2Q96FJ2 89 aa17.77■□□□□ 0.44
RPUSD3-215ENST00000475470 SLC39A14Q15043 492 aa17.77■□□□□ 0.43
RPUSD3-215ENST00000475470 OLFM4Q6UX06 510 aa17.77■□□□□ 0.43
RPUSD3-215ENST00000475470 DIS3L2Q8IYB7 885 aaKnown RBP17.77■□□□□ 0.43
RPUSD3-215ENST00000475470 TEX11Q8IYF3 940 aa17.77■□□□□ 0.43
RPUSD3-215ENST00000475470 CTCFLQ8NI51 663 aaPredicted RBP17.77■□□□□ 0.43
RPUSD3-215ENST00000475470 FBXW7Q969H0 707 aa17.77■□□□□ 0.43
RPUSD3-215ENST00000475470 FAM163AQ96GL9 167 aaPredicted RBP17.77■□□□□ 0.43
RPUSD3-215ENST00000475470 SAP30BPQ9UHR5 308 aaKnown RBP17.77■□□□□ 0.43
RPUSD3-215ENST00000475470 MRVI1Q9Y6F6 885 aa17.77■□□□□ 0.43
RPUSD3-215ENST00000475470 BTBD18B2RXH4 712 aa17.76■□□□□ 0.43
RPUSD3-215ENST00000475470 XBP1P17861 261 aa17.76■□□□□ 0.43
RPUSD3-215ENST00000475470 NOSTRINQ8IVI9 506 aa17.76■□□□□ 0.43
RPUSD3-215ENST00000475470 ZNF622Q969S3 477 aaKnown RBP eCLIP17.76■□□□□ 0.43
RPUSD3-215ENST00000475470 ROBO3Q96MS0 1386 aa17.76■□□□□ 0.43
RPUSD3-215ENST00000475470 A0A1B0GVL5 298 aa17.76■□□□□ 0.43
RPUSD3-215ENST00000475470 PLEKHA8P1O95397 391 aa17.76■□□□□ 0.43
RPUSD3-215ENST00000475470 FOXP1Q9H334 677 aaPredicted RBP17.76■□□□□ 0.43
RPUSD3-215ENST00000475470 USP25Q9UHP3 1055 aa17.76■□□□□ 0.43
RPUSD3-215ENST00000475470 NAV1Q8NEY1 1877 aa17.75■□□□□ 0.43
RPUSD3-215ENST00000475470 ESPNB1AK53 854 aa17.75■□□□□ 0.43
RPUSD3-215ENST00000475470 PRPF3O43395 683 aaKnown RBP17.75■□□□□ 0.43
RPUSD3-215ENST00000475470 ZNF444Q8N0Y2 327 aaPredicted RBP17.75■□□□□ 0.43
RPUSD3-215ENST00000475470 JMYQ8N9B5 988 aa17.75■□□□□ 0.43
RPUSD3-215ENST00000475470 V9GY48 417 aaPredicted RBP17.75■□□□□ 0.43
RPUSD3-215ENST00000475470 G3V3G9 751 aa17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 MARCKSP29966 332 aaPredicted RBP17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 PLCD1P51178 756 aa17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 FUT2Q10981 343 aa17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 DCAF8Q5TAQ9 597 aa17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 FMR1NBQ8N0W7 255 aaPredicted RBP17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 FAM200AQ8TCP9 573 aa17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 KAT14Q9H8E8 782 aa17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 ZNF287Q9HBT7 754 aa17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 MYH6P13533 1939 aa17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 TNS1Q9HBL0 1735 aaKnown RBP17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 NDUFA8P51970 172 aa17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 ANO6Q4KMQ2 910 aa17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 TMTC3Q6ZXV5 915 aa17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 DGKHQ86XP1 1220 aa17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 GAKO14976 1311 aa17.74■□□□□ 0.43
RPUSD3-215ENST00000475470 PPP6R2O75170 966 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 TSPY3P0CV98 308 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 TSPY8P0CW00 308 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 HS1BP3Q53T59 392 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 CCDC178Q5BJE1 867 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 RCSD1Q6JBY9 416 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 C2CD5Q86YS7 1000 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 MAP3K14Q99558 947 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 RHBDL3P58872 404 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 PTPAQ15257 358 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 PKN1Q16512 942 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 DOK7Q18PE1 504 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 AXDND1Q5T1B0 1012 aaPredicted RBP17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 IL17RBQ9NRM6 502 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 SUGT1Q9Y2Z0 365 aa17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 COL11A2P13942 1736 aaPredicted RBP17.73■□□□□ 0.43
RPUSD3-215ENST00000475470 hCG_1642624A0A1W2PR95 340 aa17.72■□□□□ 0.43
RPUSD3-215ENST00000475470 CMA1P23946 247 aa17.72■□□□□ 0.43
RPUSD3-215ENST00000475470 EYA3Q99504 573 aa17.72■□□□□ 0.43
RPUSD3-215ENST00000475470 SDF4Q9BRK5 362 aa17.72■□□□□ 0.43
RPUSD3-215ENST00000475470 VPS54Q9P1Q0 977 aa17.72■□□□□ 0.43
RPUSD3-215ENST00000475470 FLT1P17948 1338 aa17.72■□□□□ 0.43
RPUSD3-215ENST00000475470 F8W031 263 aaPredicted RBP17.72■□□□□ 0.43
RPUSD3-215ENST00000475470 WDHD1O75717 1129 aaPredicted RBP17.72■□□□□ 0.43
RPUSD3-215ENST00000475470 KIF5BP33176 963 aa17.72■□□□□ 0.43
RPUSD3-215ENST00000475470 PLCB2Q00722 1185 aa17.72■□□□□ 0.43
RPUSD3-215ENST00000475470 RILPL1Q5EBL4 403 aa17.72■□□□□ 0.43
RPUSD3-215ENST00000475470 SLC44A5Q8NCS7 719 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms