RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 PDE3AQ14432 1141 aa22.2■■□□□ 1.14
RNF220-212ENST00000475378 GPR142Q7Z601 462 aa22.2■■□□□ 1.14
RNF220-212ENST00000475378 TMOD4Q9NZQ9 345 aa22.2■■□□□ 1.14
RNF220-212ENST00000475378 HMG20BQ9P0W2 317 aa22.2■■□□□ 1.14
RNF220-212ENST00000475378 RGS2P41220 211 aa22.19■■□□□ 1.14
RNF220-212ENST00000475378 ERVK-9P63128 1117 aa22.19■■□□□ 1.14
RNF220-212ENST00000475378 ERVK-24P63145 666 aa22.19■■□□□ 1.14
RNF220-212ENST00000475378 GSTO1P78417 241 aa22.19■■□□□ 1.14
RNF220-212ENST00000475378 PI16Q6UXB8 463 aa22.19■■□□□ 1.14
RNF220-212ENST00000475378 FAM161BQ96MY7 647 aa22.19■■□□□ 1.14
RNF220-212ENST00000475378 APBA2Q99767 749 aa22.19■■□□□ 1.14
RNF220-212ENST00000475378 PI4KBQ9UBF8 816 aa22.19■■□□□ 1.14
RNF220-212ENST00000475378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.19■■□□□ 1.14
RNF220-212ENST00000475378 MYO5AQ9Y4I1 1855 aaKnown RBP22.18■■□□□ 1.14
RNF220-212ENST00000475378 C19orf81C9J6K1 198 aa22.18■■□□□ 1.14
RNF220-212ENST00000475378 ASNSP08243 561 aa22.18■■□□□ 1.14
RNF220-212ENST00000475378 MVPQ14764 893 aaKnown RBP22.18■■□□□ 1.14
RNF220-212ENST00000475378 TBC1D9Q6ZT07 1266 aa22.18■■□□□ 1.14
RNF220-212ENST00000475378 DNAJC18Q9H819 358 aa22.18■■□□□ 1.14
RNF220-212ENST00000475378 SHROOM1Q2M3G4 852 aaPredicted RBP22.17■■□□□ 1.14
RNF220-212ENST00000475378 ALDH1L2Q3SY69 923 aa22.17■■□□□ 1.14
RNF220-212ENST00000475378 PLEKHH3Q7Z736 793 aa22.17■■□□□ 1.14
RNF220-212ENST00000475378 METTL16Q86W50 562 aaKnown RBP22.17■■□□□ 1.14
RNF220-212ENST00000475378 TEX11Q8IYF3 940 aa22.17■■□□□ 1.14
RNF220-212ENST00000475378 AKAP2Q9Y2D5 859 aa22.17■■□□□ 1.14
RNF220-212ENST00000475378 USP17L10C9JJH3 530 aa22.16■■□□□ 1.14
RNF220-212ENST00000475378 TFCP2Q12800 502 aa22.16■■□□□ 1.14
RNF220-212ENST00000475378 SPATA5Q8NB90 893 aa22.16■■□□□ 1.14
RNF220-212ENST00000475378 SH3RF3Q8TEJ3 882 aaPredicted RBP22.16■■□□□ 1.14
RNF220-212ENST00000475378 DHX36Q9H2U1 1008 aaKnown RBP22.16■■□□□ 1.14
RNF220-212ENST00000475378 ZNF697Q5TEC3 545 aa22.15■■□□□ 1.14
RNF220-212ENST00000475378 FAM9BQ8IZU0 186 aa22.15■■□□□ 1.14
RNF220-212ENST00000475378 GTF3C2Q8WUA4 911 aaPredicted RBP22.15■■□□□ 1.14
RNF220-212ENST00000475378 LBHD1Q9BQE6 289 aaPredicted RBP22.15■■□□□ 1.14
RNF220-212ENST00000475378 SENP6Q9GZR1 1112 aaPredicted RBP22.15■■□□□ 1.14
RNF220-212ENST00000475378 ARID4AP29374 1257 aaPredicted RBP22.14■■□□□ 1.13
RNF220-212ENST00000475378 MAP2K5Q13163 448 aa22.14■■□□□ 1.13
RNF220-212ENST00000475378 PAGR1Q9BTK6 254 aa22.14■■□□□ 1.13
RNF220-212ENST00000475378 GINM1Q9NU53 330 aa22.14■■□□□ 1.13
RNF220-212ENST00000475378 FLRT1Q9NZU1 646 aa22.14■■□□□ 1.13
RNF220-212ENST00000475378 RAI14Q9P0K7 980 aa22.14■■□□□ 1.13
RNF220-212ENST00000475378 TTC28Q96AY4 2481 aa22.13■■□□□ 1.13
RNF220-212ENST00000475378 E9PSI1 815 aa22.13■■□□□ 1.13
RNF220-212ENST00000475378 CNMDO75829 334 aa22.13■■□□□ 1.13
RNF220-212ENST00000475378 CCAR1Q8IX12 1150 aaKnown RBP22.13■■□□□ 1.13
RNF220-212ENST00000475378 CDX2Q99626 313 aaPredicted RBP22.13■■□□□ 1.13
RNF220-212ENST00000475378 MEIS3Q99687 375 aa22.13■■□□□ 1.13
RNF220-212ENST00000475378 EMILIN3Q9NT22 766 aa22.13■■□□□ 1.13
RNF220-212ENST00000475378 ZBTB21Q9ULJ3 1066 aa22.13■■□□□ 1.13
RNF220-212ENST00000475378 HDAC5Q9UQL6 1122 aa22.13■■□□□ 1.13
RNF220-212ENST00000475378 MUC3AQ02505 3323 aa22.13■■□□□ 1.13
RNF220-212ENST00000475378 MYH1P12882 1939 aa22.13■■□□□ 1.13
RNF220-212ENST00000475378 ANP32CO43423 234 aa22.12■■□□□ 1.13
RNF220-212ENST00000475378 SMC4Q9NTJ3 1288 aa22.12■■□□□ 1.13
RNF220-212ENST00000475378 DDX20Q9UHI6 824 aaKnown RBP22.12■■□□□ 1.13
RNF220-212ENST00000475378 GDF11O95390 407 aa22.11■■□□□ 1.13
RNF220-212ENST00000475378 MCAMP43121 646 aa22.11■■□□□ 1.13
RNF220-212ENST00000475378 ATN1P54259 1190 aaPredicted RBP22.11■■□□□ 1.13
RNF220-212ENST00000475378 FOXP4Q8IVH2 680 aaPredicted RBP22.11■■□□□ 1.13
RNF220-212ENST00000475378 LPAR1Q92633 364 aa22.11■■□□□ 1.13
RNF220-212ENST00000475378 EDC3Q96F86 508 aaKnown RBP22.11■■□□□ 1.13
RNF220-212ENST00000475378 NEUROD6Q96NK8 337 aa22.11■■□□□ 1.13
RNF220-212ENST00000475378 AATFQ9NY61 560 aaKnown RBP eCLIP22.11■■□□□ 1.13
RNF220-212ENST00000475378 RABGAP1Q9Y3P9 1069 aa22.11■■□□□ 1.13
RNF220-212ENST00000475378 FLT1P17948 1338 aa22.1■■□□□ 1.13
RNF220-212ENST00000475378 IGHA2P01877 340 aa22.1■■□□□ 1.13
RNF220-212ENST00000475378 SLFN5Q08AF3 891 aa22.1■■□□□ 1.13
RNF220-212ENST00000475378 MFSD14CQ5VZR4 134 aa22.1■■□□□ 1.13
RNF220-212ENST00000475378 USP17L2Q6R6M4 530 aa22.1■■□□□ 1.13
RNF220-212ENST00000475378 SEMA6BQ9H3T3 888 aa22.1■■□□□ 1.13
RNF220-212ENST00000475378 DNM1LO00429 736 aa22.09■■□□□ 1.13
RNF220-212ENST00000475378 MSCO60682 206 aa22.09■■□□□ 1.13
RNF220-212ENST00000475378 RTP1P59025 263 aa22.09■■□□□ 1.13
RNF220-212ENST00000475378 PPP4CP60510 307 aa22.09■■□□□ 1.13
RNF220-212ENST00000475378 MTX1Q13505 466 aa22.09■■□□□ 1.13
RNF220-212ENST00000475378 SHHQ15465 462 aa22.09■■□□□ 1.13
RNF220-212ENST00000475378 MAPKAPK5Q8IW41 473 aa22.09■■□□□ 1.13
RNF220-212ENST00000475378 MAFAQ8NHW3 353 aaPredicted RBP22.09■■□□□ 1.13
RNF220-212ENST00000475378 TGFBRAP1Q8WUH2 860 aa22.09■■□□□ 1.13
RNF220-212ENST00000475378 C12orf42Q96LP6 360 aa22.09■■□□□ 1.13
RNF220-212ENST00000475378 PRDM6Q9NQX0 595 aa22.09■■□□□ 1.13
RNF220-212ENST00000475378 LRP2BPQ9P2M1 347 aa22.09■■□□□ 1.13
RNF220-212ENST00000475378 SLC15A5A6NIM6 579 aa22.08■■□□□ 1.13
RNF220-212ENST00000475378 SRGAP3O43295 1099 aa22.08■■□□□ 1.13
RNF220-212ENST00000475378 HOXC6P09630 235 aa22.08■■□□□ 1.13
RNF220-212ENST00000475378 PTPREP23469 700 aa22.08■■□□□ 1.13
RNF220-212ENST00000475378 C9orf50Q5SZB4 431 aa22.08■■□□□ 1.13
RNF220-212ENST00000475378 TRPV1Q8NER1 839 aa22.08■■□□□ 1.13
RNF220-212ENST00000475378 NOL10Q9BSC4 688 aaKnown RBP22.08■■□□□ 1.13
RNF220-212ENST00000475378 PALD1Q9ULE6 856 aa22.08■■□□□ 1.13
RNF220-212ENST00000475378 NOB1Q9ULX3 412 aaKnown RBP22.08■■□□□ 1.13
RNF220-212ENST00000475378 NDUFB9Q9Y6M9 179 aa22.08■■□□□ 1.13
RNF220-212ENST00000475378 ZNF236Q9UL36 1845 aa22.08■■□□□ 1.12
RNF220-212ENST00000475378 BAG3O95817 575 aa22.07■■□□□ 1.12
RNF220-212ENST00000475378 PLCG2P16885 1265 aa22.07■■□□□ 1.12
RNF220-212ENST00000475378 CCNA1P78396 465 aa22.07■■□□□ 1.12
RNF220-212ENST00000475378 ADGRA1Q86SQ6 560 aa22.07■■□□□ 1.12
RNF220-212ENST00000475378 CRACR2BQ8N4Y2 399 aaPredicted RBP22.07■■□□□ 1.12
RNF220-212ENST00000475378 NPLOC4Q8TAT6 608 aa22.07■■□□□ 1.12
RNF220-212ENST00000475378 TTYH1Q9H313 450 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms