RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 EFCC1Q9HA90 598 aa13.9□□□□□ -0.19
HLA-DOB-208ENST00000475235 ECHDC1Q9NTX5 307 aa13.9□□□□□ -0.19
HLA-DOB-208ENST00000475235 GINM1Q9NU53 330 aa13.9□□□□□ -0.19
HLA-DOB-208ENST00000475235 PALD1Q9ULE6 856 aa13.9□□□□□ -0.19
HLA-DOB-208ENST00000475235 HPS5Q9UPZ3 1129 aa13.9□□□□□ -0.19
HLA-DOB-208ENST00000475235 ZNF532Q9HCE3 1301 aa13.89□□□□□ -0.19
HLA-DOB-208ENST00000475235 SMARCA5O60264 1052 aaPredicted RBP13.89□□□□□ -0.19
HLA-DOB-208ENST00000475235 MOGSQ13724 837 aa13.89□□□□□ -0.19
HLA-DOB-208ENST00000475235 KIF22Q14807 665 aa13.89□□□□□ -0.19
HLA-DOB-208ENST00000475235 TTC6Q86TZ1 520 aa13.89□□□□□ -0.19
HLA-DOB-208ENST00000475235 CRNKL1Q9BZJ0 848 aaKnown RBP13.89□□□□□ -0.19
HLA-DOB-208ENST00000475235 AS3MTQ9HBK9 375 aa13.89□□□□□ -0.19
HLA-DOB-208ENST00000475235 SLC45A1Q9Y2W3 748 aa13.89□□□□□ -0.19
HLA-DOB-208ENST00000475235 PCDHB15Q9Y5E8 787 aa13.89□□□□□ -0.19
HLA-DOB-208ENST00000475235 TRIM75PA6NK02 468 aa13.88□□□□□ -0.19
HLA-DOB-208ENST00000475235 USP17L5A8MUK1 530 aa13.88□□□□□ -0.19
HLA-DOB-208ENST00000475235 ASNSP08243 561 aa13.88□□□□□ -0.19
HLA-DOB-208ENST00000475235 ZSCAN25Q6NSZ9 544 aa13.88□□□□□ -0.19
HLA-DOB-208ENST00000475235 ZNF280CQ8ND82 737 aa13.88□□□□□ -0.19
HLA-DOB-208ENST00000475235 EHD4Q9H223 541 aa13.88□□□□□ -0.19
HLA-DOB-208ENST00000475235 SAP30BPQ9UHR5 308 aaKnown RBP13.88□□□□□ -0.19
HLA-DOB-208ENST00000475235 TCRBV5S4A2TA0A5A2 114 aa13.87□□□□□ -0.19
HLA-DOB-208ENST00000475235 ADD2P35612 726 aa13.87□□□□□ -0.19
HLA-DOB-208ENST00000475235 GPAT2Q6NUI2 795 aa13.87□□□□□ -0.19
HLA-DOB-208ENST00000475235 C17orf99Q6UX52 265 aa13.87□□□□□ -0.19
HLA-DOB-208ENST00000475235 EDC3Q96F86 508 aaKnown RBP13.87□□□□□ -0.19
HLA-DOB-208ENST00000475235 CRBNQ96SW2 442 aa13.87□□□□□ -0.19
HLA-DOB-208ENST00000475235 DNAJC18Q9H819 358 aa13.87□□□□□ -0.19
HLA-DOB-208ENST00000475235 SERPINB13Q9UIV8 391 aa13.87□□□□□ -0.19
HLA-DOB-208ENST00000475235 GNRH1P01148 92 aa13.86□□□□□ -0.19
HLA-DOB-208ENST00000475235 IRX6P78412 446 aaPredicted RBP13.86□□□□□ -0.19
HLA-DOB-208ENST00000475235 SPP2Q13103 211 aa13.86□□□□□ -0.19
HLA-DOB-208ENST00000475235 UBE3CQ15386 1083 aa13.86□□□□□ -0.19
HLA-DOB-208ENST00000475235 GADL1Q6ZQY3 521 aa13.86□□□□□ -0.19
HLA-DOB-208ENST00000475235 CNPY4Q8N129 248 aa13.86□□□□□ -0.19
HLA-DOB-208ENST00000475235 PROCA1Q8NCQ7 364 aaPredicted RBP13.86□□□□□ -0.19
HLA-DOB-208ENST00000475235 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
HLA-DOB-208ENST00000475235 AGTPBP1Q9UPW5 1226 aa13.86□□□□□ -0.19
HLA-DOB-208ENST00000475235 PTPN22Q9Y2R2 807 aa13.86□□□□□ -0.19
HLA-DOB-208ENST00000475235 RGS19P49795 217 aa13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 LACTBP83111 547 aaPredicted RBP13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 PABPC4Q13310 644 aaKnown RBP eCLIP13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 RRP1BQ14684 758 aaKnown RBP13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 CCDC84Q86UT8 332 aaPredicted RBP13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 WDR18Q9BV38 432 aa13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 PNMA3Q9UL41 463 aa13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 AK9Q5TCS8 1911 aa13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 TTC41PQ6P2S7 1318 aa13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 ADGRA2Q96PE1 1338 aa13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 POLR3DP05423 398 aaPredicted RBP13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 TATDN1Q6P1N9 297 aa13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 LCORLQ8N3X6 602 aa13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 CPA4Q9UI42 421 aa13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 ZBTB21Q9ULJ3 1066 aa13.85□□□□□ -0.19
HLA-DOB-208ENST00000475235 DOCK1Q14185 1865 aa13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 ERC2O15083 957 aa13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 GDF11O95390 407 aa13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 CYP2C8P10632 490 aa13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 PRMT2P55345 433 aa13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 SLC4A8Q2Y0W8 1093 aa13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 SH3D19Q5HYK7 790 aa13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 IL27Q8NEV9 243 aa13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 SMCR8Q8TEV9 937 aaPredicted RBP13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 GCC1Q96CN9 775 aa13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 DDRGK1Q96HY6 314 aa13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 DCP1AQ9NPI6 582 aaPredicted RBP13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 ATP8A2Q9NTI2 1148 aa13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 MCM9Q9NXL9 1143 aa13.84□□□□□ -0.19
HLA-DOB-208ENST00000475235 C19orf81C9J6K1 198 aa13.83□□□□□ -0.2
HLA-DOB-208ENST00000475235 CLGNO14967 610 aa13.83□□□□□ -0.2
HLA-DOB-208ENST00000475235 MBD4O95243 580 aa13.83□□□□□ -0.2
HLA-DOB-208ENST00000475235 HMGCS2P54868 508 aa13.83□□□□□ -0.2
HLA-DOB-208ENST00000475235 BACE1P56817 501 aa13.83□□□□□ -0.2
HLA-DOB-208ENST00000475235 HDAC1Q13547 482 aaPredicted RBP13.83□□□□□ -0.2
HLA-DOB-208ENST00000475235 LRRFIP1Q32MZ4 808 aaKnown RBP13.83□□□□□ -0.2
HLA-DOB-208ENST00000475235 AMOTL1Q8IY63 956 aa13.83□□□□□ -0.2
HLA-DOB-208ENST00000475235 KBTBD3Q8NAB2 608 aa13.83□□□□□ -0.2
HLA-DOB-208ENST00000475235 SDR42E1Q8WUS8 393 aa13.83□□□□□ -0.2
HLA-DOB-208ENST00000475235 ARMT1Q9H993 441 aa13.83□□□□□ -0.2
HLA-DOB-208ENST00000475235 TMOD4Q9NZQ9 345 aa13.83□□□□□ -0.2
HLA-DOB-208ENST00000475235 USP17L10C9JJH3 530 aa13.82□□□□□ -0.2
HLA-DOB-208ENST00000475235 ZFYP08048 801 aaPredicted RBP13.82□□□□□ -0.2
HLA-DOB-208ENST00000475235 BCRP11274 1271 aa13.82□□□□□ -0.2
HLA-DOB-208ENST00000475235 OSBPP22059 807 aa13.82□□□□□ -0.2
HLA-DOB-208ENST00000475235 HOXD10P28358 340 aa13.82□□□□□ -0.2
HLA-DOB-208ENST00000475235 PLCD1P51178 756 aa13.82□□□□□ -0.2
HLA-DOB-208ENST00000475235 MLLT1Q03111 559 aaPredicted RBP13.82□□□□□ -0.2
HLA-DOB-208ENST00000475235 MTMR2Q13614 643 aa13.82□□□□□ -0.2
HLA-DOB-208ENST00000475235 CERKLQ49MI3 558 aaPredicted RBP13.82□□□□□ -0.2
HLA-DOB-208ENST00000475235 CABP5Q9NP86 173 aa13.82□□□□□ -0.2
HLA-DOB-208ENST00000475235 BRPF3Q9ULD4 1205 aa13.82□□□□□ -0.2
HLA-DOB-208ENST00000475235 GLRX3O76003 335 aaKnown RBP13.81□□□□□ -0.2
HLA-DOB-208ENST00000475235 GH2P01242 217 aa13.81□□□□□ -0.2
HLA-DOB-208ENST00000475235 PSMC4P43686 418 aa13.81□□□□□ -0.2
HLA-DOB-208ENST00000475235 FCGRTP55899 365 aa13.81□□□□□ -0.2
HLA-DOB-208ENST00000475235 SOX10P56693 466 aa13.81□□□□□ -0.2
HLA-DOB-208ENST00000475235 JAG1P78504 1218 aa13.81□□□□□ -0.2
HLA-DOB-208ENST00000475235 CAP1Q01518 475 aa13.81□□□□□ -0.2
HLA-DOB-208ENST00000475235 ABCB5Q2M3G0 1257 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms