RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 ANKRD23Q86SG2 305 aa11.46□□□□□ -0.57
PDPN-204ENST00000475043 CRACR2BQ8N4Y2 399 aaPredicted RBP11.46□□□□□ -0.57
PDPN-204ENST00000475043 TRIM34Q9BYJ4 488 aa11.46□□□□□ -0.57
PDPN-204ENST00000475043 DHX36Q9H2U1 1008 aaKnown RBP11.46□□□□□ -0.57
PDPN-204ENST00000475043 EFCC1Q9HA90 598 aa11.46□□□□□ -0.57
PDPN-204ENST00000475043 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.46□□□□□ -0.57
PDPN-204ENST00000475043 PI4KBQ9UBF8 816 aa11.46□□□□□ -0.57
PDPN-204ENST00000475043 MYH1P12882 1939 aa11.46□□□□□ -0.58
PDPN-204ENST00000475043 SIPA1L1O43166 1804 aa11.46□□□□□ -0.58
PDPN-204ENST00000475043 PTPRFP10586 1907 aa11.45□□□□□ -0.58
PDPN-204ENST00000475043 ZSWIM8A7E2V4 1837 aa11.45□□□□□ -0.58
PDPN-204ENST00000475043 TRIM75PA6NK02 468 aa11.45□□□□□ -0.58
PDPN-204ENST00000475043 GOLIM4O00461 696 aa11.45□□□□□ -0.58
PDPN-204ENST00000475043 USP5P45974 858 aa11.45□□□□□ -0.58
PDPN-204ENST00000475043 MLLT1Q03111 559 aaPredicted RBP11.45□□□□□ -0.58
PDPN-204ENST00000475043 KIF22Q14807 665 aa11.45□□□□□ -0.58
PDPN-204ENST00000475043 ARHGEF6Q15052 776 aa11.45□□□□□ -0.58
PDPN-204ENST00000475043 FASTKD5Q7L8L6 764 aaKnown RBP11.45□□□□□ -0.58
PDPN-204ENST00000475043 CCDC84Q86UT8 332 aaPredicted RBP11.45□□□□□ -0.58
PDPN-204ENST00000475043 TMEM121BQ9BXQ6 578 aaPredicted RBP11.45□□□□□ -0.58
PDPN-204ENST00000475043 LRRCC1Q9C099 1032 aa11.45□□□□□ -0.58
PDPN-204ENST00000475043 SAP30BPQ9UHR5 308 aaKnown RBP11.45□□□□□ -0.58
PDPN-204ENST00000475043 HERC5Q9UII4 1024 aaKnown RBP11.45□□□□□ -0.58
PDPN-204ENST00000475043 PALD1Q9ULE6 856 aa11.45□□□□□ -0.58
PDPN-204ENST00000475043 AFG3L2Q9Y4W6 797 aa11.45□□□□□ -0.58
PDPN-204ENST00000475043 SMARCA5O60264 1052 aaPredicted RBP11.44□□□□□ -0.58
PDPN-204ENST00000475043 HLA-DOAP06340 250 aa11.44□□□□□ -0.58
PDPN-204ENST00000475043 CAP2P40123 477 aa11.44□□□□□ -0.58
PDPN-204ENST00000475043 SLC9C2Q5TAH2 1124 aa11.44□□□□□ -0.58
PDPN-204ENST00000475043 CERS3Q8IU89 383 aa11.44□□□□□ -0.58
PDPN-204ENST00000475043 BOLA2Q9H3K6 86 aa11.44□□□□□ -0.58
PDPN-204ENST00000475043 CPA4Q9UI42 421 aa11.44□□□□□ -0.58
PDPN-204ENST00000475043 TAOK2Q9UL54 1235 aa11.44□□□□□ -0.58
PDPN-204ENST00000475043 PTPN22Q9Y2R2 807 aa11.44□□□□□ -0.58
PDPN-204ENST00000475043 A0A0G2JLL6 359 aaPredicted RBP11.43□□□□□ -0.58
PDPN-204ENST00000475043 MAGEB6P1A0A0J9YX57 407 aa11.43□□□□□ -0.58
PDPN-204ENST00000475043 PDE6AP16499 860 aa11.43□□□□□ -0.58
PDPN-204ENST00000475043 RGS19P49795 217 aa11.43□□□□□ -0.58
PDPN-204ENST00000475043 LACTBP83111 547 aaPredicted RBP11.43□□□□□ -0.58
PDPN-204ENST00000475043 CAP1Q01518 475 aa11.43□□□□□ -0.58
PDPN-204ENST00000475043 MOGSQ13724 837 aa11.43□□□□□ -0.58
PDPN-204ENST00000475043 GPAT2Q6NUI2 795 aa11.43□□□□□ -0.58
PDPN-204ENST00000475043 TMED8Q6PL24 325 aaPredicted RBP11.43□□□□□ -0.58
PDPN-204ENST00000475043 PRRT2Q7Z6L0 340 aaPredicted RBP11.43□□□□□ -0.58
PDPN-204ENST00000475043 FOXP4Q8IVH2 680 aaPredicted RBP11.43□□□□□ -0.58
PDPN-204ENST00000475043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.43□□□□□ -0.58
PDPN-204ENST00000475043 EDC3Q96F86 508 aaKnown RBP11.43□□□□□ -0.58
PDPN-204ENST00000475043 PARK7Q99497 189 aaKnown RBP11.43□□□□□ -0.58
PDPN-204ENST00000475043 PAG1Q9NWQ8 432 aa11.43□□□□□ -0.58
PDPN-204ENST00000475043 NAV1Q8NEY1 1877 aa11.42□□□□□ -0.58
PDPN-204ENST00000475043 ZNF532Q9HCE3 1301 aa11.42□□□□□ -0.58
PDPN-204ENST00000475043 CYP2C8P10632 490 aa11.42□□□□□ -0.58
PDPN-204ENST00000475043 ATP5JP18859 108 aa11.42□□□□□ -0.58
PDPN-204ENST00000475043 RRP1P56182 461 aaKnown RBP11.42□□□□□ -0.58
PDPN-204ENST00000475043 SPP2Q13103 211 aa11.42□□□□□ -0.58
PDPN-204ENST00000475043 RRP1BQ14684 758 aaKnown RBP11.42□□□□□ -0.58
PDPN-204ENST00000475043 C17orf99Q6UX52 265 aa11.42□□□□□ -0.58
PDPN-204ENST00000475043 ZNF280CQ8ND82 737 aa11.42□□□□□ -0.58
PDPN-204ENST00000475043 ARHGAP39Q9C0H5 1083 aa11.42□□□□□ -0.58
PDPN-204ENST00000475043 MYH7P12883 1935 aa11.42□□□□□ -0.58
PDPN-204ENST00000475043 USP17L5A8MUK1 530 aa11.41□□□□□ -0.58
PDPN-204ENST00000475043 GDF11O95390 407 aa11.41□□□□□ -0.58
PDPN-204ENST00000475043 SMCR8Q8TEV9 937 aaPredicted RBP11.41□□□□□ -0.58
PDPN-204ENST00000475043 RIOK1Q9BRS2 568 aaKnown RBP11.41□□□□□ -0.58
PDPN-204ENST00000475043 TBC1D2Q9BYX2 928 aa11.41□□□□□ -0.58
PDPN-204ENST00000475043 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.41□□□□□ -0.58
PDPN-204ENST00000475043 DNAJC18Q9H819 358 aa11.41□□□□□ -0.58
PDPN-204ENST00000475043 AS3MTQ9HBK9 375 aa11.41□□□□□ -0.58
PDPN-204ENST00000475043 LOC285556D6RIA3 1793 aa11.41□□□□□ -0.58
PDPN-204ENST00000475043 MGAMO43451 1857 aa11.4□□□□□ -0.58
PDPN-204ENST00000475043 FMNL1O95466 1100 aaPredicted RBP11.4□□□□□ -0.58
PDPN-204ENST00000475043 ASNSP08243 561 aa11.4□□□□□ -0.58
PDPN-204ENST00000475043 PSMC4P43686 418 aa11.4□□□□□ -0.58
PDPN-204ENST00000475043 HMGCS2P54868 508 aa11.4□□□□□ -0.58
PDPN-204ENST00000475043 SLC9C1Q4G0N8 1177 aa11.4□□□□□ -0.58
PDPN-204ENST00000475043 TTC6Q86TZ1 520 aa11.4□□□□□ -0.58
PDPN-204ENST00000475043 PROCA1Q8NCQ7 364 aaPredicted RBP11.4□□□□□ -0.58
PDPN-204ENST00000475043 HAUS7Q99871 368 aa11.4□□□□□ -0.58
PDPN-204ENST00000475043 CRNKL1Q9BZJ0 848 aaKnown RBP11.4□□□□□ -0.58
PDPN-204ENST00000475043 DCTPP1Q9H773 170 aa11.4□□□□□ -0.58
PDPN-204ENST00000475043 SERPINB13Q9UIV8 391 aa11.4□□□□□ -0.58
PDPN-204ENST00000475043 AGTPBP1Q9UPW5 1226 aa11.4□□□□□ -0.58
PDPN-204ENST00000475043 PTCH2Q9Y6C5 1203 aa11.4□□□□□ -0.58
PDPN-204ENST00000475043 DDX60LQ5H9U9 1706 aaKnown RBP11.4□□□□□ -0.58
PDPN-204ENST00000475043 ADGRA2Q96PE1 1338 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 TCRBV5S4A2TA0A5A2 114 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 GNRH1P01148 92 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 POLR3DP05423 398 aaPredicted RBP11.39□□□□□ -0.59
PDPN-204ENST00000475043 JAG1P78504 1218 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 MTMR2Q13614 643 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 SHROOM1Q2M3G4 852 aaPredicted RBP11.39□□□□□ -0.59
PDPN-204ENST00000475043 SLFNL1Q499Z3 407 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 TREML2Q5T2D2 321 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 NBPF11Q86T75 865 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 METTL16Q86W50 562 aaKnown RBP11.39□□□□□ -0.59
PDPN-204ENST00000475043 SDR42E1Q8WUS8 393 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 GPATCH3Q96I76 525 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 ECHDC1Q9NTX5 307 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 MCM9Q9NXL9 1143 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 PNMA3Q9UL41 463 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms