RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 MLLT1Q03111 559 aaPredicted RBP16.46■□□□□ 0.23
SPCS1-204ENST00000474945 MTMR2Q13614 643 aa16.46■□□□□ 0.23
SPCS1-204ENST00000474945 SHROOM1Q2M3G4 852 aaPredicted RBP16.46■□□□□ 0.23
SPCS1-204ENST00000474945 SLFNL1Q499Z3 407 aa16.46■□□□□ 0.23
SPCS1-204ENST00000474945 TREML2Q5T2D2 321 aa16.46■□□□□ 0.23
SPCS1-204ENST00000474945 C17orf99Q6UX52 265 aa16.46■□□□□ 0.23
SPCS1-204ENST00000474945 TTC6Q86TZ1 520 aa16.46■□□□□ 0.23
SPCS1-204ENST00000474945 METTL16Q86W50 562 aaKnown RBP16.46■□□□□ 0.23
SPCS1-204ENST00000474945 SDR42E1Q8WUS8 393 aa16.46■□□□□ 0.23
SPCS1-204ENST00000474945 EHD4Q9H223 541 aa16.46■□□□□ 0.23
SPCS1-204ENST00000474945 SLC45A1Q9Y2W3 748 aa16.46■□□□□ 0.23
SPCS1-204ENST00000474945 PROCA1Q8NCQ7 364 aaPredicted RBP16.45■□□□□ 0.22
SPCS1-204ENST00000474945 MCM9Q9NXL9 1143 aa16.45■□□□□ 0.22
SPCS1-204ENST00000474945 PNMA3Q9UL41 463 aa16.45■□□□□ 0.22
SPCS1-204ENST00000474945 PTCH2Q9Y6C5 1203 aa16.45■□□□□ 0.22
SPCS1-204ENST00000474945 GH2P01242 217 aa16.44■□□□□ 0.22
SPCS1-204ENST00000474945 CHGBP05060 677 aa16.44■□□□□ 0.22
SPCS1-204ENST00000474945 JAG1P78504 1218 aa16.44■□□□□ 0.22
SPCS1-204ENST00000474945 ZSCAN25Q6NSZ9 544 aa16.44■□□□□ 0.22
SPCS1-204ENST00000474945 TMOD4Q9NZQ9 345 aa16.44■□□□□ 0.22
SPCS1-204ENST00000474945 ZBTB47Q9UFB7 747 aaPredicted RBP16.44■□□□□ 0.22
SPCS1-204ENST00000474945 MYH7P12883 1935 aa16.44■□□□□ 0.22
SPCS1-204ENST00000474945 FMNL1O95466 1100 aaPredicted RBP16.43■□□□□ 0.22
SPCS1-204ENST00000474945 BCRP11274 1271 aa16.43■□□□□ 0.22
SPCS1-204ENST00000474945 PSMC4P43686 418 aa16.43■□□□□ 0.22
SPCS1-204ENST00000474945 PABPC4Q13310 644 aaKnown RBP eCLIP16.43■□□□□ 0.223e-11■■■■□ 24.1
SPCS1-204ENST00000474945 UBE3CQ15386 1083 aa16.43■□□□□ 0.22
SPCS1-204ENST00000474945 SLC9C1Q4G0N8 1177 aa16.43■□□□□ 0.22
SPCS1-204ENST00000474945 FEZ1Q99689 392 aa16.43■□□□□ 0.22
SPCS1-204ENST00000474945 DCP1AQ9NPI6 582 aaPredicted RBP16.43■□□□□ 0.22
SPCS1-204ENST00000474945 GINM1Q9NU53 330 aa16.43■□□□□ 0.22
SPCS1-204ENST00000474945 PRKAB2O43741 272 aa16.42■□□□□ 0.22
SPCS1-204ENST00000474945 GNRH1P01148 92 aa16.42■□□□□ 0.22
SPCS1-204ENST00000474945 RGS19P49795 217 aa16.42■□□□□ 0.22
SPCS1-204ENST00000474945 PLCD1P51178 756 aa16.42■□□□□ 0.22
SPCS1-204ENST00000474945 FCGRTP55899 365 aa16.42■□□□□ 0.22
SPCS1-204ENST00000474945 BACE1P56817 501 aa16.42■□□□□ 0.22
SPCS1-204ENST00000474945 RAB3GAP1Q15042 981 aa16.42■□□□□ 0.22
SPCS1-204ENST00000474945 DDRGK1Q96HY6 314 aa16.42■□□□□ 0.22
SPCS1-204ENST00000474945 TRIM47Q96LD4 638 aa16.42■□□□□ 0.22
SPCS1-204ENST00000474945 WDR18Q9BV38 432 aa16.42■□□□□ 0.22
SPCS1-204ENST00000474945 ERC2O15083 957 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 CYP2D6P10635 497 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 OSBPP22059 807 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 CTGFP29279 349 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 SHMT1P34896 483 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 IRX3P78415 501 aaPredicted RBP16.41■□□□□ 0.22
SPCS1-204ENST00000474945 EVX2Q03828 476 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 ABCB5Q2M3G0 1257 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 CERKLQ49MI3 558 aaPredicted RBP16.41■□□□□ 0.22
SPCS1-204ENST00000474945 SH3D19Q5HYK7 790 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 TATDN1Q6P1N9 297 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 AMOTL1Q8IY63 956 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 KBTBD3Q8NAB2 608 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 OTUD7AQ8TE49 926 aaPredicted RBP16.41■□□□□ 0.22
SPCS1-204ENST00000474945 ARMC5Q96C12 935 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 TTC41PQ6P2S7 1318 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 MYPNQ86TC9 1320 aa16.41■□□□□ 0.22
SPCS1-204ENST00000474945 USP17L10C9JJH3 530 aa16.4■□□□□ 0.22
SPCS1-204ENST00000474945 MPHOSPH10O00566 681 aaKnown RBP16.4■□□□□ 0.22
SPCS1-204ENST00000474945 HOXD10P28358 340 aa16.4■□□□□ 0.22
SPCS1-204ENST00000474945 ZYXQ15942 572 aaKnown RBP16.4■□□□□ 0.22
SPCS1-204ENST00000474945 ANKRD13CQ8N6S4 541 aa16.4■□□□□ 0.22
SPCS1-204ENST00000474945 CABP5Q9NP86 173 aa16.4■□□□□ 0.22
SPCS1-204ENST00000474945 SRRDQ9UH36 339 aa16.4■□□□□ 0.22
SPCS1-204ENST00000474945 SLC4A4Q9Y6R1 1079 aa16.4■□□□□ 0.22
SPCS1-204ENST00000474945 CENPFP49454 3210 aa16.4■□□□□ 0.22
SPCS1-204ENST00000474945 MYCP01106 439 aaPredicted RBP16.39■□□□□ 0.21
SPCS1-204ENST00000474945 MX1P20591 662 aa16.39■□□□□ 0.21
SPCS1-204ENST00000474945 PRMT2P55345 433 aa16.39■□□□□ 0.21
SPCS1-204ENST00000474945 NBPF11Q86T75 865 aa16.39■□□□□ 0.21
SPCS1-204ENST00000474945 SLC44A5Q8NCS7 719 aa16.39■□□□□ 0.21
SPCS1-204ENST00000474945 RAET1EQ8TD07 263 aa16.39■□□□□ 0.21
SPCS1-204ENST00000474945 SH3TC2Q8TF17 1288 aa16.39■□□□□ 0.21
SPCS1-204ENST00000474945 ZNF333Q96JL9 665 aa16.39■□□□□ 0.21
SPCS1-204ENST00000474945 PUS7LQ9H0K6 701 aaKnown RBP16.39■□□□□ 0.21
SPCS1-204ENST00000474945 ASCC2Q9H1I8 757 aaPredicted RBP16.39■□□□□ 0.21
SPCS1-204ENST00000474945 ATP8A2Q9NTI2 1148 aa16.39■□□□□ 0.21
SPCS1-204ENST00000474945 C19orf81C9J6K1 198 aa16.38■□□□□ 0.21
SPCS1-204ENST00000474945 TNPO2O14787 897 aaKnown RBP16.38■□□□□ 0.21
SPCS1-204ENST00000474945 GLRX3O76003 335 aaKnown RBP16.38■□□□□ 0.21
SPCS1-204ENST00000474945 GCLCP48506 637 aaPredicted RBP16.38■□□□□ 0.21
SPCS1-204ENST00000474945 PRKCZQ05513 592 aa16.38■□□□□ 0.21
SPCS1-204ENST00000474945 GABPAQ06546 454 aa16.38■□□□□ 0.21
SPCS1-204ENST00000474945 HDAC1Q13547 482 aaPredicted RBP16.38■□□□□ 0.21
SPCS1-204ENST00000474945 FAM110CQ1W6H9 321 aa16.38■□□□□ 0.21
SPCS1-204ENST00000474945 ANKRD45Q5TZF3 282 aa16.38■□□□□ 0.21
SPCS1-204ENST00000474945 APPBP2Q92624 585 aa16.38■□□□□ 0.21
SPCS1-204ENST00000474945 DYNLL2Q96FJ2 89 aa16.38■□□□□ 0.21
SPCS1-204ENST00000474945 FSD1Q9BTV5 496 aa16.38■□□□□ 0.21
SPCS1-204ENST00000474945 SWAP70Q9UH65 585 aa16.38■□□□□ 0.21
SPCS1-204ENST00000474945 CYP2D7A0A087X1C5 515 aa16.37■□□□□ 0.21
SPCS1-204ENST00000474945 RNF113AO15541 343 aaKnown RBP16.37■□□□□ 0.21
SPCS1-204ENST00000474945 ZFYP08048 801 aaPredicted RBP16.37■□□□□ 0.21
SPCS1-204ENST00000474945 LRRFIP1Q32MZ4 808 aaKnown RBP16.37■□□□□ 0.21
SPCS1-204ENST00000474945 USP17L2Q6R6M4 530 aa16.37■□□□□ 0.21
SPCS1-204ENST00000474945 PI4K2BQ8TCG2 481 aa16.37■□□□□ 0.21
SPCS1-204ENST00000474945 GCC1Q96CN9 775 aa16.37■□□□□ 0.21
SPCS1-204ENST00000474945 BAZ2AQ9UIF9 1905 aaKnown RBP16.37■□□□□ 0.21
SPCS1-204ENST00000474945 POTEFA5A3E0 1075 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms