RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 OSBPL5Q9H0X9 879 aaPredicted RBP10.2□□□□□ -0.78
USP54-211ENST00000474929 IRF2BPLQ9H1B7 796 aa10.2□□□□□ -0.78
USP54-211ENST00000474929 TMOD4Q9NZQ9 345 aa10.2□□□□□ -0.78
USP54-211ENST00000474929 DAGLAQ9Y4D2 1042 aa10.2□□□□□ -0.78
USP54-211ENST00000474929 IVNS1ABPQ9Y6Y0 642 aa10.2□□□□□ -0.78
USP54-211ENST00000474929 ZNF318Q5VUA4 2279 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 CHD9Q3L8U1 2897 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 SLC15A5A6NIM6 579 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 SEPT4O43236 478 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 TIMP1P01033 207 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 CYBAP13498 195 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 ZEB1P37275 1124 aaPredicted RBP10.19□□□□□ -0.78
USP54-211ENST00000474929 ADCYAP1R1P41586 468 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 TMPOP42166 694 aaKnown RBP10.19□□□□□ -0.78
USP54-211ENST00000474929 CCDC30Q5VVM6 783 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 MFSD5Q6N075 450 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 ZSCAN29Q8IWY8 852 aaPredicted RBP10.19□□□□□ -0.78
USP54-211ENST00000474929 GJD3Q8N144 294 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 KHSRPQ92945 711 aaKnown RBP eCLIP10.19□□□□□ -0.78
USP54-211ENST00000474929 RNF39Q9H2S5 420 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 NKX2-4Q9H2Z4 354 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 PHF24Q9UPV7 400 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 CHMP3Q9Y3E7 222 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 A0A0G2JMZ2 1700 aa10.19□□□□□ -0.78
USP54-211ENST00000474929 KIF16BQ96L93 1317 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 PI4KAP2A4QPH2 592 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 DCXO43602 365 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 PLIN1O60240 522 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 PQBP1O60828 265 aaKnown RBP10.18□□□□□ -0.78
USP54-211ENST00000474929 NFIAQ12857 509 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 SPP2Q13103 211 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 PKN1Q16512 942 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 CWF19L2Q2TBE0 894 aaKnown RBP10.18□□□□□ -0.78
USP54-211ENST00000474929 CDC42EP5Q6NZY7 148 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 ANKRD33Q7Z3H0 272 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 RNF180Q86T96 592 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 PI4KAP1Q8N8J0 262 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 WDR66Q8TBY9 1149 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 IDI2Q9BXS1 227 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 FAM198AQ9UFP1 575 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 ZNF236Q9UL36 1845 aa10.18□□□□□ -0.78
USP54-211ENST00000474929 MROH5Q6ZUA9 1318 aa10.17□□□□□ -0.78
USP54-211ENST00000474929 USP17L5A8MUK1 530 aa10.17□□□□□ -0.78
USP54-211ENST00000474929 APBB1O00213 710 aa10.17□□□□□ -0.78
USP54-211ENST00000474929 TBC1D12O60347 775 aa10.17□□□□□ -0.78
USP54-211ENST00000474929 GFRA3O60609 400 aa10.17□□□□□ -0.78
USP54-211ENST00000474929 MYCNP04198 464 aaPredicted RBP10.17□□□□□ -0.78
USP54-211ENST00000474929 SSTR3P32745 418 aaPredicted RBP10.17□□□□□ -0.78
USP54-211ENST00000474929 LRRC41Q15345 812 aa10.17□□□□□ -0.78
USP54-211ENST00000474929 GRIK5Q16478 980 aa10.17□□□□□ -0.78
USP54-211ENST00000474929 EPHA10Q5JZY3 1008 aa10.17□□□□□ -0.78
USP54-211ENST00000474929 TMEM240Q5SV17 173 aa10.17□□□□□ -0.78
USP54-211ENST00000474929 OLFML2BQ68BL8 750 aa10.17□□□□□ -0.78
USP54-211ENST00000474929 SLC5A4Q9NY91 659 aa10.17□□□□□ -0.78
USP54-211ENST00000474929 PCDHA11Q9Y5I1 949 aa10.17□□□□□ -0.78
USP54-211ENST00000474929 ROBO3Q96MS0 1386 aa10.16□□□□□ -0.78
USP54-211ENST00000474929 SPTBN4Q9H254 2564 aa10.16□□□□□ -0.78
USP54-211ENST00000474929 MYH13Q9UKX3 1938 aa10.16□□□□□ -0.78
USP54-211ENST00000474929 GRB14Q14449 540 aa10.16□□□□□ -0.78
USP54-211ENST00000474929 FBXO33Q7Z6M2 555 aa10.16□□□□□ -0.78
USP54-211ENST00000474929 NUP133Q8WUM0 1156 aa10.16□□□□□ -0.78
USP54-211ENST00000474929 FERMT2Q96AC1 680 aa10.16□□□□□ -0.78
USP54-211ENST00000474929 STK31Q9BXU1 1019 aa10.16□□□□□ -0.78
USP54-211ENST00000474929 PORCNQ9H237 461 aa10.16□□□□□ -0.78
USP54-211ENST00000474929 USP40Q9NVE5 1235 aa10.16□□□□□ -0.78
USP54-211ENST00000474929 RABGAP1Q9Y3P9 1069 aa10.16□□□□□ -0.78
USP54-211ENST00000474929 MTCH2Q9Y6C9 303 aa10.16□□□□□ -0.78
USP54-211ENST00000474929 CFAP54Q96N23 3096 aa10.16□□□□□ -0.78
USP54-211ENST00000474929 PRRC2BQ5JSZ5 2229 aaKnown RBP10.15□□□□□ -0.78
USP54-211ENST00000474929 RFX7Q2KHR2 1363 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 ATAD5Q96QE3 1844 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 GRXCR1A8MXD5 290 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 C19orf81C9J6K1 198 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 RGS20O76081 388 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 PTPREP23469 700 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 RGS3P49796 1198 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 CASP7P55210 303 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 CALD1Q05682 793 aaKnown RBP10.15□□□□□ -0.78
USP54-211ENST00000474929 PUS10Q3MIT2 529 aaKnown RBP10.15□□□□□ -0.78
USP54-211ENST00000474929 POTEHQ6S545 545 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 FAM178BQ8IXR5 827 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 PAGR1Q9BTK6 254 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 TXNRD2Q9NNW7 524 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 NRBP1Q9UHY1 535 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 CHD7Q9P2D1 2997 aa10.15□□□□□ -0.78
USP54-211ENST00000474929 PKD1L2Q7Z442 2459 aa10.14□□□□□ -0.79
USP54-211ENST00000474929 A0A1W2PQ45 241 aaPredicted RBP10.14□□□□□ -0.79
USP54-211ENST00000474929 A0A1W2PQY0 241 aa10.14□□□□□ -0.79
USP54-211ENST00000474929 SLC4A2P04920 1241 aa10.14□□□□□ -0.79
USP54-211ENST00000474929 RARBP10826 455 aa10.14□□□□□ -0.79
USP54-211ENST00000474929 CYP2C19P33261 490 aa10.14□□□□□ -0.79
USP54-211ENST00000474929 FAAP100Q0VG06 881 aa10.14□□□□□ -0.79
USP54-211ENST00000474929 WDR78Q5VTH9 848 aa10.14□□□□□ -0.79
USP54-211ENST00000474929 SLF2Q8IX21 1173 aa10.14□□□□□ -0.79
USP54-211ENST00000474929 LINS1Q8NG48 757 aa10.14□□□□□ -0.79
USP54-211ENST00000474929 TSEN34Q9BSV6 310 aaKnown RBP10.14□□□□□ -0.79
USP54-211ENST00000474929 WDR18Q9BV38 432 aa10.14□□□□□ -0.79
USP54-211ENST00000474929 XPNPEP3Q9NQH7 507 aa10.14□□□□□ -0.79
USP54-211ENST00000474929 FLRT1Q9NZU1 646 aa10.14□□□□□ -0.79
USP54-211ENST00000474929 RBPJLQ9UBG7 517 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms