RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 OPTNQ96CV9 577 aa18.76■□□□□ 0.59
COL1A1-204ENST00000474644 OTUD5Q96G74 571 aa18.76■□□□□ 0.59
COL1A1-204ENST00000474644 PICK1Q9NRD5 415 aa18.76■□□□□ 0.59
COL1A1-204ENST00000474644 AOC2O75106 756 aa18.75■□□□□ 0.59
COL1A1-204ENST00000474644 ZBTB48P10074 688 aaPredicted RBP18.75■□□□□ 0.59
COL1A1-204ENST00000474644 NOGQ13253 232 aa18.75■□□□□ 0.59
COL1A1-204ENST00000474644 STK11IPQ8N1F8 1099 aa18.75■□□□□ 0.59
COL1A1-204ENST00000474644 ANAPC4Q9UJX5 808 aa18.75■□□□□ 0.59
COL1A1-204ENST00000474644 ZBTB21Q9ULJ3 1066 aa18.75■□□□□ 0.59
COL1A1-204ENST00000474644 PTPRAP18433 802 aa18.74■□□□□ 0.59
COL1A1-204ENST00000474644 PTH1RQ03431 593 aa18.74■□□□□ 0.59
COL1A1-204ENST00000474644 CTDSPL2Q05D32 466 aa18.74■□□□□ 0.59
COL1A1-204ENST00000474644 PPATQ06203 517 aa18.74■□□□□ 0.59
COL1A1-204ENST00000474644 MKRN3Q13064 507 aaKnown RBP18.74■□□□□ 0.59
COL1A1-204ENST00000474644 CERKLQ49MI3 558 aaPredicted RBP18.74■□□□□ 0.59
COL1A1-204ENST00000474644 CCDC84Q86UT8 332 aaPredicted RBP18.74■□□□□ 0.59
COL1A1-204ENST00000474644 LAMA4Q16363 1823 aa18.74■□□□□ 0.59
COL1A1-204ENST00000474644 ATAD5Q96QE3 1844 aa18.74■□□□□ 0.59
COL1A1-204ENST00000474644 GH2P01242 217 aa18.73■□□□□ 0.59
COL1A1-204ENST00000474644 SLC3A2P08195 630 aaKnown RBP18.73■□□□□ 0.59
COL1A1-204ENST00000474644 ASNSP08243 561 aa18.73■□□□□ 0.59
COL1A1-204ENST00000474644 HAND2P61296 217 aa18.73■□□□□ 0.59
COL1A1-204ENST00000474644 PPIL2Q13356 520 aa18.73■□□□□ 0.59
COL1A1-204ENST00000474644 ABCB5Q2M3G0 1257 aa18.73■□□□□ 0.59
COL1A1-204ENST00000474644 COL13A1Q5TAT6 717 aaPredicted RBP18.73■□□□□ 0.59
COL1A1-204ENST00000474644 ZIC5Q96T25 663 aa18.73■□□□□ 0.59
COL1A1-204ENST00000474644 LSG1Q9H089 658 aaKnown RBP18.73■□□□□ 0.59
COL1A1-204ENST00000474644 NBPF3Q9H094 633 aa18.73■□□□□ 0.59
COL1A1-204ENST00000474644 GINM1Q9NU53 330 aa18.73■□□□□ 0.59
COL1A1-204ENST00000474644 PRDM1O75626 825 aa18.72■□□□□ 0.59
COL1A1-204ENST00000474644 HSPA1AP0DMV8 641 aaKnown RBP18.72■□□□□ 0.59
COL1A1-204ENST00000474644 HSPA1BP0DMV9 641 aaKnown RBP18.72■□□□□ 0.59
COL1A1-204ENST00000474644 AKR1B1P15121 316 aa18.72■□□□□ 0.59
COL1A1-204ENST00000474644 RASA1P20936 1047 aa18.72■□□□□ 0.59
COL1A1-204ENST00000474644 KIAA1211Q6ZU35 1233 aa18.72■□□□□ 0.59
COL1A1-204ENST00000474644 ANO2Q9NQ90 1003 aa18.72■□□□□ 0.59
COL1A1-204ENST00000474644 CTNNA3Q9UI47 895 aa18.72■□□□□ 0.59
COL1A1-204ENST00000474644 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.72■□□□□ 0.59
COL1A1-204ENST00000474644 TACC3Q9Y6A5 838 aa18.72■□□□□ 0.59
COL1A1-204ENST00000474644 ZHX2Q9Y6X8 837 aa18.72■□□□□ 0.59
COL1A1-204ENST00000474644 MPHOSPH10O00566 681 aaKnown RBP18.71■□□□□ 0.59
COL1A1-204ENST00000474644 IRF6O14896 467 aa18.71■□□□□ 0.59
COL1A1-204ENST00000474644 KIF23Q02241 960 aaPredicted RBP18.71■□□□□ 0.59
COL1A1-204ENST00000474644 PDE4BQ07343 736 aa18.71■□□□□ 0.59
COL1A1-204ENST00000474644 TBC1D10CQ8IV04 446 aa18.71■□□□□ 0.59
COL1A1-204ENST00000474644 MAP4K1Q92918 833 aa18.71■□□□□ 0.59
COL1A1-204ENST00000474644 CCDC17Q96LX7 622 aa18.71■□□□□ 0.59
COL1A1-204ENST00000474644 MKNK2Q9HBH9 465 aa18.71■□□□□ 0.59
COL1A1-204ENST00000474644 ZNF287Q9HBT7 754 aa18.71■□□□□ 0.59
COL1A1-204ENST00000474644 U3KPZ7 1027 aaPredicted RBP18.71■□□□□ 0.59
COL1A1-204ENST00000474644 USP17L5A8MUK1 530 aa18.7■□□□□ 0.58
COL1A1-204ENST00000474644 ZNF213O14771 459 aa18.7■□□□□ 0.58
COL1A1-204ENST00000474644 MAP2K2P36507 400 aa18.7■□□□□ 0.58
COL1A1-204ENST00000474644 IMMTQ16891 758 aaKnown RBP18.7■□□□□ 0.58
COL1A1-204ENST00000474644 CABP5Q9NP86 173 aa18.7■□□□□ 0.58
COL1A1-204ENST00000474644 KCNH4Q9UQ05 1017 aa18.7■□□□□ 0.58
COL1A1-204ENST00000474644 RBM8AQ9Y5S9 174 aaKnown RBP18.7■□□□□ 0.58
COL1A1-204ENST00000474644 MYH8P13535 1937 aa18.7■□□□□ 0.58
COL1A1-204ENST00000474644 PHIPQ8WWQ0 1821 aa18.7■□□□□ 0.58
COL1A1-204ENST00000474644 FGRP09769 529 aa18.69■□□□□ 0.58
COL1A1-204ENST00000474644 GUCY1A2P33402 732 aa18.69■□□□□ 0.58
COL1A1-204ENST00000474644 SEPT2Q15019 361 aa18.69■□□□□ 0.58
COL1A1-204ENST00000474644 RAB3GAP1Q15042 981 aa18.69■□□□□ 0.58
COL1A1-204ENST00000474644 TMEM179Q6ZVK1 233 aa18.69■□□□□ 0.58
COL1A1-204ENST00000474644 STAG1Q8WVM7 1258 aa18.69■□□□□ 0.58
COL1A1-204ENST00000474644 AS3MTQ9HBK9 375 aa18.69■□□□□ 0.58
COL1A1-204ENST00000474644 INCENPQ9NQS7 918 aa18.69■□□□□ 0.58
COL1A1-204ENST00000474644 AFG3L2Q9Y4W6 797 aa18.69■□□□□ 0.58
COL1A1-204ENST00000474644 MANSC4A6NHS7 340 aaPredicted RBP18.68■□□□□ 0.58
COL1A1-204ENST00000474644 TRIM75PA6NK02 468 aa18.68■□□□□ 0.58
COL1A1-204ENST00000474644 ORC4O43929 436 aa18.68■□□□□ 0.58
COL1A1-204ENST00000474644 GTF2A2P52657 109 aa18.68■□□□□ 0.58
COL1A1-204ENST00000474644 SNAPC2Q13487 334 aa18.68■□□□□ 0.58
COL1A1-204ENST00000474644 AKNAD1Q5T1N1 836 aa18.68■□□□□ 0.58
COL1A1-204ENST00000474644 MS4A4AQ96JQ5 239 aa18.68■□□□□ 0.58
COL1A1-204ENST00000474644 TBC1D2Q9BYX2 928 aa18.68■□□□□ 0.58
COL1A1-204ENST00000474644 GREB1LQ9C091 1923 aaPredicted RBP18.68■□□□□ 0.58
COL1A1-204ENST00000474644 NEDD4P46934 1319 aa18.68■□□□□ 0.58
COL1A1-204ENST00000474644 PLIN4Q96Q06 1357 aa18.68■□□□□ 0.58
COL1A1-204ENST00000474644 CXCL11O14625 94 aa18.67■□□□□ 0.58
COL1A1-204ENST00000474644 CYP21A2P08686 494 aa18.67■□□□□ 0.58
COL1A1-204ENST00000474644 SREBF2Q12772 1141 aa18.67■□□□□ 0.58
COL1A1-204ENST00000474644 CLEC10AQ8IUN9 316 aa18.67■□□□□ 0.58
COL1A1-204ENST00000474644 ZNF444Q8N0Y2 327 aaPredicted RBP18.67■□□□□ 0.58
COL1A1-204ENST00000474644 ZNF280CQ8ND82 737 aa18.67■□□□□ 0.58
COL1A1-204ENST00000474644 WDR18Q9BV38 432 aa18.67■□□□□ 0.58
COL1A1-204ENST00000474644 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.67■□□□□ 0.58
COL1A1-204ENST00000474644 RNF41Q9H4P4 317 aaPredicted RBP18.67■□□□□ 0.58
COL1A1-204ENST00000474644 CCL15-CCL14A0A0B4J2E2 113 aa18.66■□□□□ 0.58
COL1A1-204ENST00000474644 PCP11498 1178 aaKnown RBP18.66■□□□□ 0.58
COL1A1-204ENST00000474644 CETPP11597 493 aa18.66■□□□□ 0.58
COL1A1-204ENST00000474644 ICA1Q05084 483 aa18.66■□□□□ 0.58
COL1A1-204ENST00000474644 SPP2Q13103 211 aa18.66■□□□□ 0.58
COL1A1-204ENST00000474644 CCL15Q16663 113 aa18.66■□□□□ 0.58
COL1A1-204ENST00000474644 FAM47AQ5JRC9 791 aa18.66■□□□□ 0.58
COL1A1-204ENST00000474644 MFSD6Q6ZSS7 791 aa18.66■□□□□ 0.58
COL1A1-204ENST00000474644 BRI3BPQ8WY22 251 aa18.66■□□□□ 0.58
COL1A1-204ENST00000474644 TOMM22Q9NS69 142 aa18.66■□□□□ 0.58
COL1A1-204ENST00000474644 A0A0G2JLL6 359 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-204ENST00000474644 TESPA1A2RU30 521 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 374.9 ms