RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 LONRF2Q1L5Z9 754 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 RILPL1Q5EBL4 403 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 RESP18Q5W5W9 173 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 WDR93Q6P2C0 686 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 SRLQ86TD4 932 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 CTAGE6Q86UF2 777 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 ZNF589Q86UQ0 364 aaPredicted RBP9.13□□□□□ -0.95
CCDC93-208ENST00000474546 TMTC1Q8IUR5 882 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 CTAGE4Q8IX94 777 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 CNNM3Q8NE01 707 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 FUT8Q9BYC5 575 aa9.13□□□□□ -0.95
CCDC93-208ENST00000474546 ZNHIT6Q9NWK9 470 aaKnown RBP9.13□□□□□ -0.95
CCDC93-208ENST00000474546 VWA3AA6NCI4 1184 aa9.12□□□□□ -0.95
CCDC93-208ENST00000474546 XBP1P17861 261 aa9.12□□□□□ -0.95
CCDC93-208ENST00000474546 KIF23Q02241 960 aaPredicted RBP9.12□□□□□ -0.95
CCDC93-208ENST00000474546 APOBRQ0VD83 1088 aa9.12□□□□□ -0.95
CCDC93-208ENST00000474546 NAA30Q147X3 362 aaPredicted RBP9.12□□□□□ -0.95
CCDC93-208ENST00000474546 TTF1Q15361 905 aaPredicted RBP9.12□□□□□ -0.95
CCDC93-208ENST00000474546 KIF4BQ2VIQ3 1234 aa9.12□□□□□ -0.95
CCDC93-208ENST00000474546 TTC31Q49AM3 519 aaPredicted RBP9.12□□□□□ -0.95
CCDC93-208ENST00000474546 POTEDQ86YR6 584 aa9.12□□□□□ -0.95
CCDC93-208ENST00000474546 TMTC2Q8N394 836 aa9.12□□□□□ -0.95
CCDC93-208ENST00000474546 KRI1Q8N9T8 703 aaKnown RBP9.12□□□□□ -0.95
CCDC93-208ENST00000474546 CCDC12Q8WUD4 166 aaPredicted RBP9.12□□□□□ -0.95
CCDC93-208ENST00000474546 DCAF5Q96JK2 942 aa9.12□□□□□ -0.95
CCDC93-208ENST00000474546 CAPNS2Q96L46 248 aa9.12□□□□□ -0.95
CCDC93-208ENST00000474546 PARD6BQ9BYG5 372 aa9.12□□□□□ -0.95
CCDC93-208ENST00000474546 RAI14Q9P0K7 980 aa9.12□□□□□ -0.95
CCDC93-208ENST00000474546 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCDC93-208ENST00000474546 RRP15Q9Y3B9 282 aaKnown RBP9.12□□□□□ -0.95
CCDC93-208ENST00000474546 NID2Q14112 1375 aa9.12□□□□□ -0.95
CCDC93-208ENST00000474546 A0A1B0GVL5 298 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 GOLGA8BA8MQT2 603 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 POLR3GO15318 223 aaPredicted RBP9.11□□□□□ -0.95
CCDC93-208ENST00000474546 IGSF3O75054 1194 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 PPFIA4O75335 1185 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 CTDNEP1O95476 244 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 CPP00450 1065 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 HSPD1P10809 573 aaKnown RBP9.11□□□□□ -0.95
CCDC93-208ENST00000474546 CAPN2P17655 700 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 FECHP22830 423 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 LMOD1P29536 600 aaPredicted RBP9.11□□□□□ -0.95
CCDC93-208ENST00000474546 LMAN1P49257 510 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 AARSP49588 968 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC93-208ENST00000474546 NT5C2P49902 561 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 CEBPZQ03701 1054 aaKnown RBP9.11□□□□□ -0.95
CCDC93-208ENST00000474546 DNAJC21Q5F1R6 531 aaKnown RBP9.11□□□□□ -0.95
CCDC93-208ENST00000474546 TAF7LQ5H9L4 462 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 AXDND1Q5T1B0 1012 aaPredicted RBP9.11□□□□□ -0.95
CCDC93-208ENST00000474546 ICE2Q659A1 982 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 ZNF662Q6ZS27 426 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 LDHDQ86WU2 507 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 TRIM22Q8IYM9 498 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 CNNM2Q9H8M5 875 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 DBNLQ9UJU6 430 aaKnown RBP9.11□□□□□ -0.95
CCDC93-208ENST00000474546 KCNH3Q9ULD8 1083 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 ABT1Q9ULW3 272 aaKnown RBP9.11□□□□□ -0.95
CCDC93-208ENST00000474546 PA2G4Q9UQ80 394 aaKnown RBP9.11□□□□□ -0.95
CCDC93-208ENST00000474546 LAMB4A4D0S4 1761 aa9.11□□□□□ -0.95
CCDC93-208ENST00000474546 DDX60Q8IY21 1712 aaKnown RBP9.11□□□□□ -0.95
CCDC93-208ENST00000474546 ITGBL1O95965 494 aaPredicted RBP9.1□□□□□ -0.95
CCDC93-208ENST00000474546 SNRPA1P09661 255 aaKnown RBP9.1□□□□□ -0.95
CCDC93-208ENST00000474546 PPP1R2P41236 205 aa9.1□□□□□ -0.95
CCDC93-208ENST00000474546 PLCD1P51178 756 aa9.1□□□□□ -0.95
CCDC93-208ENST00000474546 KCNQ4P56696 695 aa9.1□□□□□ -0.95
CCDC93-208ENST00000474546 ARID5BQ14865 1188 aa9.1□□□□□ -0.95
CCDC93-208ENST00000474546 SART3Q15020 963 aaKnown RBP9.1□□□□□ -0.95
CCDC93-208ENST00000474546 TSR1Q2NL82 804 aaKnown RBP9.1□□□□□ -0.95
CCDC93-208ENST00000474546 TTC39AQ5SRH9 613 aa9.1□□□□□ -0.95
CCDC93-208ENST00000474546 ANKRD13DQ6ZTN6 518 aa9.1□□□□□ -0.95
CCDC93-208ENST00000474546 RASGRP2Q7LDG7 609 aa9.1□□□□□ -0.95
CCDC93-208ENST00000474546 CCDC91Q7Z6B0 441 aa9.1□□□□□ -0.95
CCDC93-208ENST00000474546 SUGP1Q8IWZ8 645 aaKnown RBP9.1□□□□□ -0.95
CCDC93-208ENST00000474546 NAPGQ99747 312 aaPredicted RBP9.1□□□□□ -0.95
CCDC93-208ENST00000474546 TRIM34Q9BYJ4 488 aa9.1□□□□□ -0.95
CCDC93-208ENST00000474546 ANGEL1Q9UNK9 670 aaKnown RBP9.1□□□□□ -0.95
CCDC93-208ENST00000474546 TIAM2Q8IVF5 1701 aa9.1□□□□□ -0.95
CCDC93-208ENST00000474546 AFDNP55196 1824 aaKnown RBP9.1□□□□□ -0.95
CCDC93-208ENST00000474546 A0A087WUV0 522 aaPredicted RBP9.09□□□□□ -0.95
CCDC93-208ENST00000474546 KLF18A0A0U1RQI7 1052 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 A0A1B0GTH6 734 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 ZNF213O14771 459 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 PRC1O43663 620 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 IPO7O95373 1038 aaKnown RBP9.09□□□□□ -0.95
CCDC93-208ENST00000474546 ZNF18P17022 549 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 LMNB1P20700 586 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 RFX5P48382 616 aaPredicted RBP9.09□□□□□ -0.95
CCDC93-208ENST00000474546 APBA1Q02410 837 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 PTPN12Q05209 780 aaKnown RBP9.09□□□□□ -0.95
CCDC93-208ENST00000474546 POSTNQ15063 836 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 CWF19L2Q2TBE0 894 aaKnown RBP9.09□□□□□ -0.95
CCDC93-208ENST00000474546 BEND6Q5SZJ8 279 aaPredicted RBP9.09□□□□□ -0.95
CCDC93-208ENST00000474546 SPATA1Q5VX52 437 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 CYP26C1Q6V0L0 522 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 MICALCLQ6ZW33 695 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 TMEM139Q8IV31 216 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 TTC5Q8N0Z6 440 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 PLBD2Q8NHP8 589 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 APPBP2Q92624 585 aa9.09□□□□□ -0.95
CCDC93-208ENST00000474546 KIFC2Q96AC6 838 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms