RNA–Protein interactions for RNA: ENST00000474528.5

SFXN5-211, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 4,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-211ENST00000474528 NTSR2O95665 410 aa13.29□□□□□ -0.28
SFXN5-211ENST00000474528 EPS15P42566 896 aa13.29□□□□□ -0.28
SFXN5-211ENST00000474528 SLC39A14Q15043 492 aa13.29□□□□□ -0.28
SFXN5-211ENST00000474528 USP17L1Q7RTZ2 530 aa13.29□□□□□ -0.28
SFXN5-211ENST00000474528 PDCL2Q8N4E4 241 aa13.29□□□□□ -0.28
SFXN5-211ENST00000474528 UBA5Q9GZZ9 404 aa13.29□□□□□ -0.28
SFXN5-211ENST00000474528 PCDHA5Q9Y5H7 936 aa13.29□□□□□ -0.28
SFXN5-211ENST00000474528 RPS6KA4O75676 772 aa13.29□□□□□ -0.28
SFXN5-211ENST00000474528 APBA3O96018 575 aa13.29□□□□□ -0.28
SFXN5-211ENST00000474528 SERPINB2P05120 415 aa13.29□□□□□ -0.28
SFXN5-211ENST00000474528 CBX1P83916 185 aa13.29□□□□□ -0.28
SFXN5-211ENST00000474528 OXER1Q8TDS5 423 aa13.29□□□□□ -0.28
SFXN5-211ENST00000474528 NFE2L3Q9Y4A8 694 aa13.29□□□□□ -0.28
SFXN5-211ENST00000474528 HLA-DOAP06340 250 aa13.28□□□□□ -0.28
SFXN5-211ENST00000474528 BTDP43251 543 aa13.28□□□□□ -0.28
SFXN5-211ENST00000474528 DNAI1Q9UI46 699 aa13.28□□□□□ -0.28
SFXN5-211ENST00000474528 CMA1P23946 247 aa13.28□□□□□ -0.28
SFXN5-211ENST00000474528 ARID4AP29374 1257 aaPredicted RBP13.28□□□□□ -0.28
SFXN5-211ENST00000474528 NLRP12P59046 1061 aa13.28□□□□□ -0.28
SFXN5-211ENST00000474528 KCNB2Q92953 911 aa13.28□□□□□ -0.28
SFXN5-211ENST00000474528 RBM28Q9NW13 759 aaKnown RBP13.28□□□□□ -0.28
SFXN5-211ENST00000474528 POSTNQ15063 836 aa13.28□□□□□ -0.28
SFXN5-211ENST00000474528 CCDC43Q96MW1 224 aaKnown RBP13.28□□□□□ -0.28
SFXN5-211ENST00000474528 NARFQ9UHQ1 456 aa13.28□□□□□ -0.28
SFXN5-211ENST00000474528 FRMPD2Q68DX3 1309 aaPredicted RBP13.27□□□□□ -0.28
SFXN5-211ENST00000474528 SMIM22K7EJ46 135 aa13.27□□□□□ -0.28
SFXN5-211ENST00000474528 CASP1P29466 404 aa13.27□□□□□ -0.28
SFXN5-211ENST00000474528 ARHGAP29Q52LW3 1261 aa13.27□□□□□ -0.28
SFXN5-211ENST00000474528 KANK3Q6NY19 840 aa13.27□□□□□ -0.28
SFXN5-211ENST00000474528 CLEC4GQ6UXB4 293 aa13.27□□□□□ -0.28
SFXN5-211ENST00000474528 TRIM47Q96LD4 638 aa13.27□□□□□ -0.28
SFXN5-211ENST00000474528 PARP3Q9Y6F1 533 aa13.27□□□□□ -0.28
SFXN5-211ENST00000474528 PARP1P09874 1014 aaKnown RBP13.27□□□□□ -0.29
SFXN5-211ENST00000474528 GNAQP50148 359 aa13.27□□□□□ -0.29
SFXN5-211ENST00000474528 SF3B2Q13435 895 aaKnown RBP13.27□□□□□ -0.29
SFXN5-211ENST00000474528 DPP8Q6V1X1 898 aaPredicted RBP13.27□□□□□ -0.29
SFXN5-211ENST00000474528 KIAA0825Q8IV33 1275 aa13.27□□□□□ -0.29
SFXN5-211ENST00000474528 SMYD4Q8IYR2 804 aaPredicted RBP13.27□□□□□ -0.29
SFXN5-211ENST00000474528 LRRC47Q8N1G4 583 aaKnown RBP13.27□□□□□ -0.29
SFXN5-211ENST00000474528 EYA3Q99504 573 aa13.27□□□□□ -0.29
SFXN5-211ENST00000474528 TMOD2Q9NZR1 351 aa13.27□□□□□ -0.29
SFXN5-211ENST00000474528 TTF2Q9UNY4 1162 aaKnown RBP13.27□□□□□ -0.29
SFXN5-211ENST00000474528 IFNAR1P17181 557 aa13.27□□□□□ -0.29
SFXN5-211ENST00000474528 DTHD1Q6ZMT9 781 aa13.27□□□□□ -0.29
SFXN5-211ENST00000474528 POLR3EQ9NVU0 708 aa13.27□□□□□ -0.29
SFXN5-211ENST00000474528 FMNL1O95466 1100 aaPredicted RBP13.26□□□□□ -0.29
SFXN5-211ENST00000474528 CALML3P27482 149 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 ASIC1P78348 528 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 KARSQ15046 597 aaKnown RBP13.26□□□□□ -0.29
SFXN5-211ENST00000474528 FANCLQ9NW38 375 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 RGPD2P0DJD1 1756 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 TOPAZ1Q8N9V7 1692 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 GNG11P61952 73 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 LONRF3Q496Y0 759 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 CACTINQ8WUQ7 758 aaKnown RBP13.26□□□□□ -0.29
SFXN5-211ENST00000474528 RRP36Q96EU6 259 aaKnown RBP13.26□□□□□ -0.29
SFXN5-211ENST00000474528 CSRNP2Q9H175 543 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 RIOK3O14730 519 aaKnown RBP13.26□□□□□ -0.29
SFXN5-211ENST00000474528 PTGDRQ13258 359 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 INF2Q27J81 1249 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 SYT10Q6XYQ8 523 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 CCDC148Q8NFR7 591 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 VPS16Q9H269 839 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 RFX7Q2KHR2 1363 aa13.26□□□□□ -0.29
SFXN5-211ENST00000474528 FAM205CA6NFA0 338 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 NEMFO60524 1076 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 LIFRP42702 1097 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 MTIF2P46199 727 aaKnown RBP13.25□□□□□ -0.29
SFXN5-211ENST00000474528 ENAHQ8N8S7 591 aaPredicted RBP13.25□□□□□ -0.29
SFXN5-211ENST00000474528 IQUBQ8NA54 791 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 PDLIM2Q96JY6 352 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 ARPP21Q9UBL0 812 aaPredicted RBP13.25□□□□□ -0.29
SFXN5-211ENST00000474528 ATP1A3P13637 1013 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 NFIXQ14938 502 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 SH3RF3Q8TEJ3 882 aaPredicted RBP13.25□□□□□ -0.29
SFXN5-211ENST00000474528 DEF6Q9H4E7 631 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 VEZTQ9HBM0 779 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 HPS5Q9UPZ3 1129 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 CTNND2Q9UQB3 1225 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 CCNT1O60563 726 aaKnown RBP13.25□□□□□ -0.29
SFXN5-211ENST00000474528 MMP1P03956 469 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 TXKP42681 527 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 DNA2P51530 1060 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 KRBA2Q6ZNG9 492 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 CCDC12Q8WUD4 166 aaPredicted RBP13.25□□□□□ -0.29
SFXN5-211ENST00000474528 EPSTI1Q96J88 318 aa13.25□□□□□ -0.29
SFXN5-211ENST00000474528 ALDH8A1Q9H2A2 487 aaPredicted RBP13.25□□□□□ -0.29
SFXN5-211ENST00000474528 ZNHIT6Q9NWK9 470 aaKnown RBP13.25□□□□□ -0.29
SFXN5-211ENST00000474528 RRP9O43818 475 aaKnown RBP13.24□□□□□ -0.29
SFXN5-211ENST00000474528 ZNF500O60304 480 aaPredicted RBP13.24□□□□□ -0.29
SFXN5-211ENST00000474528 MED1Q15648 1581 aaPredicted RBP13.24□□□□□ -0.29
SFXN5-211ENST00000474528 RBM26Q5T8P6 1007 aaKnown RBP13.24□□□□□ -0.29
SFXN5-211ENST00000474528 SPATA31A5Q5VU36 1347 aa13.24□□□□□ -0.29
SFXN5-211ENST00000474528 SPATA31A7Q8IWB4 1347 aa13.24□□□□□ -0.29
SFXN5-211ENST00000474528 CCDC150Q8NCX0 1101 aa13.24□□□□□ -0.29
SFXN5-211ENST00000474528 AFF2P51816 1311 aa13.24□□□□□ -0.29
SFXN5-211ENST00000474528 FOXN1O15353 648 aa13.24□□□□□ -0.29
SFXN5-211ENST00000474528 WDHD1O75717 1129 aaPredicted RBP13.24□□□□□ -0.29
SFXN5-211ENST00000474528 ZYXQ15942 572 aaKnown RBP13.24□□□□□ -0.29
SFXN5-211ENST00000474528 TMEM266Q2M3C6 531 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms