RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 TEX11Q8IYF3 940 aa10.76□□□□□ -0.69
TNFRSF9-202ENST00000474475 SH3TC2Q8TF17 1288 aa10.76□□□□□ -0.69
TNFRSF9-202ENST00000474475 TRIM47Q96LD4 638 aa10.76□□□□□ -0.69
TNFRSF9-202ENST00000474475 PARK7Q99497 189 aaKnown RBP10.76□□□□□ -0.69
TNFRSF9-202ENST00000474475 CCDC8Q9H0W5 538 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF9-202ENST00000474475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.76□□□□□ -0.69
TNFRSF9-202ENST00000474475 PIH1D3Q9NQM4 214 aaKnown RBP10.76□□□□□ -0.69
TNFRSF9-202ENST00000474475 AATFQ9NY61 560 aaKnown RBP eCLIP10.76□□□□□ -0.69
TNFRSF9-202ENST00000474475 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.76□□□□□ -0.69
TNFRSF9-202ENST00000474475 ATAD5Q96QE3 1844 aa10.76□□□□□ -0.69
TNFRSF9-202ENST00000474475 FOCADQ5VW36 1801 aa10.75□□□□□ -0.69
TNFRSF9-202ENST00000474475 TRIM75PA6NK02 468 aa10.75□□□□□ -0.69
TNFRSF9-202ENST00000474475 MYCP01106 439 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF9-202ENST00000474475 OSBPP22059 807 aa10.75□□□□□ -0.69
TNFRSF9-202ENST00000474475 PSMC4P43686 418 aa10.75□□□□□ -0.69
TNFRSF9-202ENST00000474475 PRMT2P55345 433 aa10.75□□□□□ -0.69
TNFRSF9-202ENST00000474475 PPP4CP60510 307 aa10.75□□□□□ -0.69
TNFRSF9-202ENST00000474475 NBPF11Q86T75 865 aa10.75□□□□□ -0.69
TNFRSF9-202ENST00000474475 NOL10Q9BSC4 688 aaKnown RBP10.75□□□□□ -0.69
TNFRSF9-202ENST00000474475 SRRDQ9UH36 339 aa10.75□□□□□ -0.69
TNFRSF9-202ENST00000474475 FMNL1O95466 1100 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF9-202ENST00000474475 BAG3O95817 575 aa10.74□□□□□ -0.69
TNFRSF9-202ENST00000474475 CAP2P40123 477 aa10.74□□□□□ -0.69
TNFRSF9-202ENST00000474475 MFSD10Q14728 455 aa10.74□□□□□ -0.69
TNFRSF9-202ENST00000474475 MAMSTRQ6ZN01 415 aa10.74□□□□□ -0.69
TNFRSF9-202ENST00000474475 MAPKAPK5Q8IW41 473 aa10.74□□□□□ -0.69
TNFRSF9-202ENST00000474475 PLSCR2Q9NRY7 297 aa10.74□□□□□ -0.69
TNFRSF9-202ENST00000474475 EXOC6BQ9Y2D4 811 aa10.74□□□□□ -0.69
TNFRSF9-202ENST00000474475 SLC45A1Q9Y2W3 748 aa10.74□□□□□ -0.69
TNFRSF9-202ENST00000474475 LOC285556D6RIA3 1793 aa10.74□□□□□ -0.69
TNFRSF9-202ENST00000474475 MGAMO43451 1857 aa10.74□□□□□ -0.69
TNFRSF9-202ENST00000474475 DYNLL1P63167 89 aaKnown RBP10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 SPP2Q13103 211 aa10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 E2F4Q16254 413 aa10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 TREML2Q5T2D2 321 aa10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 LHX8Q68G74 356 aa10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 TGFBRAP1Q8WUH2 860 aa10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 DHX36Q9H2U1 1008 aaKnown RBP10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 DNAJC18Q9H819 358 aa10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 PI4KBQ9UBF8 816 aa10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 HERC5Q9UII4 1024 aaKnown RBP10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 AGTPBP1Q9UPW5 1226 aa10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 NDUFB9Q9Y6M9 179 aa10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 FLT1P17948 1338 aa10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 MYPNQ86TC9 1320 aa10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 HTTP42858 3142 aa10.73□□□□□ -0.69
TNFRSF9-202ENST00000474475 IGSF3O75054 1194 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 CYP7A1P22680 504 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 HOXD10P28358 340 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 FCGRTP55899 365 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 JAG1P78504 1218 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 PRKCZQ05513 592 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 MTFR1Q15390 333 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 SLC4A8Q2Y0W8 1093 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 PPP1R15BQ5SWA1 713 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 AACSQ86V21 672 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 PROCA1Q8NCQ7 364 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 ZNF280CQ8ND82 737 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 RAET1EQ8TD07 263 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 ANTXR1Q9H6X2 564 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 PALD1Q9ULE6 856 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 GABRQQ9UN88 632 aa10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 KIAA0100Q14667 2235 aaKnown RBP10.72□□□□□ -0.69
TNFRSF9-202ENST00000474475 C2orf72A6NCS6 295 aa10.71□□□□□ -0.69
TNFRSF9-202ENST00000474475 USP17L5A8MUK1 530 aa10.71□□□□□ -0.69
TNFRSF9-202ENST00000474475 IDH1O75874 414 aaKnown RBP10.71□□□□□ -0.69
TNFRSF9-202ENST00000474475 GRK4P32298 578 aa10.71□□□□□ -0.69
TNFRSF9-202ENST00000474475 HMGCS2P54868 508 aa10.71□□□□□ -0.69
TNFRSF9-202ENST00000474475 SHROOM1Q2M3G4 852 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF9-202ENST00000474475 METTL16Q86W50 562 aaKnown RBP10.71□□□□□ -0.69
TNFRSF9-202ENST00000474475 ERC1Q8IUD2 1116 aa10.71□□□□□ -0.69
TNFRSF9-202ENST00000474475 MIGA1Q8NAN2 632 aa10.71□□□□□ -0.69
TNFRSF9-202ENST00000474475 SMCR8Q8TEV9 937 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF9-202ENST00000474475 IL1RAPL2Q9NP60 686 aa10.71□□□□□ -0.69
TNFRSF9-202ENST00000474475 SAP30BPQ9UHR5 308 aaKnown RBP10.71□□□□□ -0.69
TNFRSF9-202ENST00000474475 COG6Q9Y2V7 657 aa10.71□□□□□ -0.69
TNFRSF9-202ENST00000474475 MS4A1P11836 297 aa10.7□□□□□ -0.7
TNFRSF9-202ENST00000474475 SH3D19Q5HYK7 790 aa10.7□□□□□ -0.7
TNFRSF9-202ENST00000474475 FOXP4Q8IVH2 680 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF9-202ENST00000474475 SIRT2Q8IXJ6 389 aa10.7□□□□□ -0.7
TNFRSF9-202ENST00000474475 ANKRD13CQ8N6S4 541 aa10.7□□□□□ -0.7
TNFRSF9-202ENST00000474475 MAGEB6Q8N7X4 407 aa10.7□□□□□ -0.7
TNFRSF9-202ENST00000474475 RHPN1Q8TCX5 695 aa10.7□□□□□ -0.7
TNFRSF9-202ENST00000474475 WDR18Q9BV38 432 aa10.7□□□□□ -0.7
TNFRSF9-202ENST00000474475 TBC1D2Q9BYX2 928 aa10.7□□□□□ -0.7
TNFRSF9-202ENST00000474475 AS3MTQ9HBK9 375 aa10.7□□□□□ -0.7
TNFRSF9-202ENST00000474475 SCUBE2Q9NQ36 999 aa10.7□□□□□ -0.7
TNFRSF9-202ENST00000474475 ZBTB40Q9NUA8 1239 aa10.7□□□□□ -0.7
TNFRSF9-202ENST00000474475 PNMA3Q9UL41 463 aa10.7□□□□□ -0.7
TNFRSF9-202ENST00000474475 MYH1P12882 1939 aa10.69□□□□□ -0.7
TNFRSF9-202ENST00000474475 APBB1O00213 710 aa10.69□□□□□ -0.7
TNFRSF9-202ENST00000474475 TNPO2O14787 897 aaKnown RBP10.69□□□□□ -0.7
TNFRSF9-202ENST00000474475 GDF11O95390 407 aa10.69□□□□□ -0.7
TNFRSF9-202ENST00000474475 ASNSP08243 561 aa10.69□□□□□ -0.7
TNFRSF9-202ENST00000474475 FLT3LGP49771 235 aa10.69□□□□□ -0.7
TNFRSF9-202ENST00000474475 FOXK1P85037 733 aa10.69□□□□□ -0.7
TNFRSF9-202ENST00000474475 MTMR2Q13614 643 aa10.69□□□□□ -0.7
TNFRSF9-202ENST00000474475 HSP90AB4PQ58FF6 505 aa10.69□□□□□ -0.7
TNFRSF9-202ENST00000474475 RPAP2Q8IXW5 612 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF9-202ENST00000474475 CRACR2BQ8N4Y2 399 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms