RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 SHC4Q6S5L8 630 aa16.51■□□□□ 0.23
SAMM50-203ENST00000474323 ENOX1Q8TC92 643 aaKnown RBP16.51■□□□□ 0.23
SAMM50-203ENST00000474323 CXorf56Q9H5V9 222 aa16.51■□□□□ 0.23
SAMM50-203ENST00000474323 HELLSQ9NRZ9 838 aa16.51■□□□□ 0.23
SAMM50-203ENST00000474323 USP21Q9UK80 565 aa16.51■□□□□ 0.23
SAMM50-203ENST00000474323 PCDHA5Q9Y5H7 936 aa16.51■□□□□ 0.23
SAMM50-203ENST00000474323 SOWAHDA6NJG2 315 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 ERLIN2O94905 339 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 PRPF6O94906 941 aaKnown RBP16.5■□□□□ 0.23
SAMM50-203ENST00000474323 CCDC172P0C7W6 258 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 USP8P40818 1118 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 NR1I3Q14994 352 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 RASGRP2Q7LDG7 609 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 METTL16Q86W50 562 aaKnown RBP16.5■□□□□ 0.23
SAMM50-203ENST00000474323 FOXP4Q8IVH2 680 aaPredicted RBP16.5■□□□□ 0.23
SAMM50-203ENST00000474323 FNBP4Q8N3X1 1017 aaPredicted RBP16.5■□□□□ 0.23
SAMM50-203ENST00000474323 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.5■□□□□ 0.23
SAMM50-203ENST00000474323 SYF2O95926 243 aaKnown RBP16.5■□□□□ 0.23
SAMM50-203ENST00000474323 CHGBP05060 677 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 CYP19A1P11511 503 aaPredicted RBP16.5■□□□□ 0.23
SAMM50-203ENST00000474323 PDE4BQ07343 736 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 TNNI3KQ59H18 835 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 RESP18Q5W5W9 173 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 KBTBD3Q8NAB2 608 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 DACH1Q9UI36 760 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 NFE2L3Q9Y4A8 694 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 FPGT-TNNI3KV9GXZ4 949 aa16.5■□□□□ 0.23
SAMM50-203ENST00000474323 KIF28PB7ZC32 967 aa16.49■□□□□ 0.23
SAMM50-203ENST00000474323 MCM3P25205 808 aa16.49■□□□□ 0.23
SAMM50-203ENST00000474323 HOOK1Q9UJC3 728 aaKnown RBP16.49■□□□□ 0.23
SAMM50-203ENST00000474323 CEP83Q9Y592 693 aa16.49■□□□□ 0.23
SAMM50-203ENST00000474323 KCNQ2O43526 872 aa16.49■□□□□ 0.23
SAMM50-203ENST00000474323 SHOX2O60902 331 aaPredicted RBP16.49■□□□□ 0.23
SAMM50-203ENST00000474323 BMP6P22004 513 aa16.49■□□□□ 0.23
SAMM50-203ENST00000474323 CDC27P30260 824 aa16.49■□□□□ 0.23
SAMM50-203ENST00000474323 MEX3CQ5U5Q3 659 aaKnown RBP16.49■□□□□ 0.23
SAMM50-203ENST00000474323 RAD9BQ6WBX8 426 aa16.49■□□□□ 0.23
SAMM50-203ENST00000474323 RPAINQ86UA6 219 aa16.49■□□□□ 0.23
SAMM50-203ENST00000474323 MLKLQ8NB16 471 aa16.49■□□□□ 0.23
SAMM50-203ENST00000474323 KLHDC4Q8TBB5 520 aa16.49■□□□□ 0.23
SAMM50-203ENST00000474323 NAPGQ99747 312 aaPredicted RBP16.49■□□□□ 0.23
SAMM50-203ENST00000474323 PLEKHA4Q9H4M7 779 aa16.49■□□□□ 0.23
SAMM50-203ENST00000474323 TTF2Q9UNY4 1162 aaKnown RBP16.49■□□□□ 0.23
SAMM50-203ENST00000474323 MAP9Q49MG5 647 aa16.48■□□□□ 0.23
SAMM50-203ENST00000474323 ANKRD20A12PQ8NF67 263 aa16.48■□□□□ 0.23
SAMM50-203ENST00000474323 ZNF526Q8TF50 670 aaPredicted RBP16.48■□□□□ 0.23
SAMM50-203ENST00000474323 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
SAMM50-203ENST00000474323 CWC25Q9NXE8 425 aaPredicted RBP16.48■□□□□ 0.23
SAMM50-203ENST00000474323 MYO1AQ9UBC5 1043 aa16.48■□□□□ 0.23
SAMM50-203ENST00000474323 ZBTB1Q9Y2K1 713 aa16.48■□□□□ 0.23
SAMM50-203ENST00000474323 CCDC196A0A1B0GTZ2 297 aa16.48■□□□□ 0.23
SAMM50-203ENST00000474323 MAP2K2P36507 400 aa16.48■□□□□ 0.23
SAMM50-203ENST00000474323 LONRF3Q496Y0 759 aa16.48■□□□□ 0.23
SAMM50-203ENST00000474323 CHST3Q7LGC8 479 aa16.48■□□□□ 0.23
SAMM50-203ENST00000474323 NDUFB9Q9Y6M9 179 aa16.48■□□□□ 0.23
SAMM50-203ENST00000474323 A0A1B0GTH6 734 aa16.47■□□□□ 0.23
SAMM50-203ENST00000474323 ATP6V1AP38606 617 aa16.47■□□□□ 0.23
SAMM50-203ENST00000474323 PTPAQ15257 358 aa16.47■□□□□ 0.23
SAMM50-203ENST00000474323 HSP90AA4PQ58FG1 418 aa16.47■□□□□ 0.23
SAMM50-203ENST00000474323 KIF6Q6ZMV9 814 aa16.47■□□□□ 0.23
SAMM50-203ENST00000474323 SLC35F6Q8N357 371 aa16.47■□□□□ 0.23
SAMM50-203ENST00000474323 CCDC148Q8NFR7 591 aa16.47■□□□□ 0.23
SAMM50-203ENST00000474323 SMARCC1Q92922 1105 aaPredicted RBP16.47■□□□□ 0.23
SAMM50-203ENST00000474323 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.47■□□□□ 0.23
SAMM50-203ENST00000474323 DONSONQ9NYP3 566 aa16.47■□□□□ 0.23
SAMM50-203ENST00000474323 PALLDQ8WX93 1383 aa16.47■□□□□ 0.23
SAMM50-203ENST00000474323 TJP1Q07157 1748 aa16.47■□□□□ 0.23
SAMM50-203ENST00000474323 APPP05067 770 aa16.46■□□□□ 0.23
SAMM50-203ENST00000474323 HSPD1P10809 573 aaKnown RBP16.46■□□□□ 0.23
SAMM50-203ENST00000474323 MDM2Q00987 491 aaPredicted RBP16.46■□□□□ 0.23
SAMM50-203ENST00000474323 DDX46Q7L014 1031 aaKnown RBP16.46■□□□□ 0.23
SAMM50-203ENST00000474323 PPFIBP1Q86W92 1011 aa16.46■□□□□ 0.23
SAMM50-203ENST00000474323 KCNH3Q9ULD8 1083 aa16.46■□□□□ 0.23
SAMM50-203ENST00000474323 EBAG9O00559 213 aa16.46■□□□□ 0.23
SAMM50-203ENST00000474323 KIF1CO43896 1103 aaKnown RBP16.46■□□□□ 0.23
SAMM50-203ENST00000474323 CASP7P55210 303 aa16.46■□□□□ 0.23
SAMM50-203ENST00000474323 CT47A1Q5JQC4 288 aaPredicted RBP16.46■□□□□ 0.23
SAMM50-203ENST00000474323 CDHR2Q9BYE9 1310 aa16.46■□□□□ 0.23
SAMM50-203ENST00000474323 H7C1W4 665 aa16.45■□□□□ 0.22
SAMM50-203ENST00000474323 CPLX1O14810 134 aa16.45■□□□□ 0.22
SAMM50-203ENST00000474323 HNRNPH1P31943 449 aaKnown RBP16.45■□□□□ 0.22
SAMM50-203ENST00000474323 MNAT1P51948 309 aa16.45■□□□□ 0.22
SAMM50-203ENST00000474323 FMR1Q06787 632 aaKnown RBP eCLIP16.45■□□□□ 0.22
SAMM50-203ENST00000474323 NT5DC1Q5TFE4 455 aa16.45■□□□□ 0.22
SAMM50-203ENST00000474323 IGSF22Q8N9C0 903 aa16.45■□□□□ 0.22
SAMM50-203ENST00000474323 NOA1Q8NC60 698 aaKnown RBP16.45■□□□□ 0.22
SAMM50-203ENST00000474323 KAT2BQ92831 832 aa16.45■□□□□ 0.22
SAMM50-203ENST00000474323 PLCD4Q9BRC7 762 aa16.45■□□□□ 0.22
SAMM50-203ENST00000474323 MAN1B1Q9UKM7 699 aa16.45■□□□□ 0.22
SAMM50-203ENST00000474323 HPCAL4Q9UM19 191 aa16.45■□□□□ 0.22
SAMM50-203ENST00000474323 TFCP2Q12800 502 aa16.45■□□□□ 0.22
SAMM50-203ENST00000474323 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
SAMM50-203ENST00000474323 MAP3K15Q6ZN16 1313 aa16.45■□□□□ 0.22
SAMM50-203ENST00000474323 A0A0U1RQJ8 604 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 RBL2Q08999 1139 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 TCIRG1Q13488 830 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 ZMYM1Q5SVZ6 1142 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 TRIML1Q8N9V2 468 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 ATRIPQ8WXE1 791 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 CCDC51Q96ER9 411 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms