RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 DENND2AQ9ULE3 1009 aa21.09■□□□□ 0.97
ECHDC1-214ENST00000474289 GGCXP38435 758 aa21.08■□□□□ 0.97
ECHDC1-214ENST00000474289 PSEN1P49768 467 aa21.08■□□□□ 0.97
ECHDC1-214ENST00000474289 SECISBP2LQ93073 1101 aaKnown RBP21.08■□□□□ 0.97
ECHDC1-214ENST00000474289 GDAP1L1Q96MZ0 367 aa21.08■□□□□ 0.97
ECHDC1-214ENST00000474289 UBE2Q2LH0YL09 131 aa21.08■□□□□ 0.96
ECHDC1-214ENST00000474289 STX17P56962 302 aa21.08■□□□□ 0.96
ECHDC1-214ENST00000474289 STIM1Q13586 685 aa21.08■□□□□ 0.96
ECHDC1-214ENST00000474289 MAP9Q49MG5 647 aa21.08■□□□□ 0.96
ECHDC1-214ENST00000474289 SPATA1Q5VX52 437 aa21.08■□□□□ 0.96
ECHDC1-214ENST00000474289 KLHL10Q6JEL2 608 aa21.08■□□□□ 0.96
ECHDC1-214ENST00000474289 SPATA20Q8TB22 786 aa21.08■□□□□ 0.96
ECHDC1-214ENST00000474289 CCDC51Q96ER9 411 aa21.08■□□□□ 0.96
ECHDC1-214ENST00000474289 KAT14Q9H8E8 782 aa21.08■□□□□ 0.96
ECHDC1-214ENST00000474289 FBXO2Q9UK22 296 aaPredicted RBP21.08■□□□□ 0.96
ECHDC1-214ENST00000474289 ANGEL1Q9UNK9 670 aaKnown RBP21.08■□□□□ 0.96
ECHDC1-214ENST00000474289 WDR19Q8NEZ3 1342 aa21.08■□□□□ 0.96
ECHDC1-214ENST00000474289 KIF13AQ9H1H9 1805 aa21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 LMOD2Q6P5Q4 547 aa21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 TMTC1Q8IUR5 882 aa21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 NKX2-3Q8TAU0 364 aa21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 FAM169AQ9Y6X4 670 aa21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 PHRF1Q9P1Y6 1649 aaKnown RBP21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 ACTN4O43707 911 aaKnown RBP21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 PTPREP23469 700 aa21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 CASP7P55210 303 aa21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 FKBP4Q02790 459 aaKnown RBP eCLIP21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 TRIM29Q14134 588 aa21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 HSP90AB3PQ58FF7 597 aa21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 CDKAL1Q5VV42 579 aa21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 ZNF496Q96IT1 587 aaPredicted RBP21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 GPR108Q9NPR9 543 aa21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 SYNRGQ9UMZ2 1314 aa21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 SPEF2Q9C093 1822 aa21.07■□□□□ 0.96
ECHDC1-214ENST00000474289 ZNF213O14771 459 aa21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 CD44P16070 742 aaKnown RBP21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 TOB1P50616 345 aaPredicted RBP21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 TRAPPC11Q7Z392 1133 aa21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 LRP10Q7Z4F1 713 aa21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 MICU3Q86XE3 530 aa21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 AGPSO00116 658 aa21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 RANBP6O60518 1105 aaKnown RBP21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 KCNV1Q6PIU1 500 aa21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 APOA5Q6Q788 366 aa21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 NOSTRINQ8IVI9 506 aa21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 FAM76AQ8TAV0 307 aa21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 CTAGE1Q96RT6 745 aa21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 SLF1Q9BQI6 1058 aa21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 ABHD10Q9NUJ1 306 aa21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 UBN2Q6ZU65 1347 aa21.06■□□□□ 0.96
ECHDC1-214ENST00000474289 EBAG9O00559 213 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 MCM3P25205 808 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 HNRNPH1P31943 449 aaKnown RBP21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 IRAK1P51617 712 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 NTRK3Q16288 839 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 FBXW10Q5XX13 1052 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 CPLX2Q6PUV4 134 aaKnown RBP21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 SENP2Q9HC62 589 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 HDAC6Q9UBN7 1215 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 ITIH6Q6UXX5 1313 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 CUL4BQ13620 913 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 FILIP1LQ4L180 1135 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 MMS19Q96T76 1030 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 CRACR2AQ9BSW2 395 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 NBPF3Q9H094 633 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 PUS7LQ9H0K6 701 aaKnown RBP21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 CXorf56Q9H5V9 222 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 TRIM10Q9UDY6 481 aa21.05■□□□□ 0.96
ECHDC1-214ENST00000474289 RNF225M0QZC1 329 aaPredicted RBP21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 ENC1O14682 589 aa21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 CDC25AP30304 524 aa21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 IARSP41252 1262 aaKnown RBP21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 USP49Q70CQ1 688 aa21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 GSPT2Q8IYD1 628 aaKnown RBP21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 EHD4Q9H223 541 aa21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 SLC52A2Q9HAB3 445 aa21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 KDM6AO15550 1401 aaPredicted RBP21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 ZMYND10O75800 440 aa21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 MNAT1P51948 309 aa21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 FOXO4P98177 505 aa21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 CYP26C1Q6V0L0 522 aa21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 CYB5R4Q7L1T6 521 aa21.04■□□□□ 0.96
ECHDC1-214ENST00000474289 GOLGA6CA6NDK9 693 aa21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 BTBD18B2RXH4 712 aa21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 SH2B2O14492 632 aaPredicted RBP21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 GOLGA6DP0CG33 693 aa21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 MYBL2P10244 700 aa21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 IL15P40933 162 aaPredicted RBP21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 LRRC24Q50LG9 513 aa21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 KANK3Q6NY19 840 aa21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 GOLGA6AQ9NYA3 693 aa21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 GUCA1BQ9UMX6 200 aa21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 MYO5AQ9Y4I1 1855 aaKnown RBP21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 TARSL2A2RTX5 802 aaKnown RBP21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 CCT6AP40227 531 aaKnown RBP21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 CT47A1Q5JQC4 288 aaPredicted RBP21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 SELENOOQ9BVL4 669 aa21.03■□□□□ 0.96
ECHDC1-214ENST00000474289 SMYD4Q8IYR2 804 aaPredicted RBP21.02■□□□□ 0.96
ECHDC1-214ENST00000474289 ANKRD20A12PQ8NF67 263 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms