RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 APOBRQ0VD83 1088 aa12.04□□□□□ -0.48
PRPF38A-202ENST00000474048 STK3Q13188 491 aa12.04□□□□□ -0.48
PRPF38A-202ENST00000474048 DCAF15Q66K64 600 aa12.04□□□□□ -0.48
PRPF38A-202ENST00000474048 CATIPQ7Z7H3 387 aa12.04□□□□□ -0.48
PRPF38A-202ENST00000474048 CCDC17Q96LX7 622 aa12.04□□□□□ -0.48
PRPF38A-202ENST00000474048 ZKSCAN3Q9BRR0 538 aa12.04□□□□□ -0.48
PRPF38A-202ENST00000474048 KAT14Q9H8E8 782 aa12.04□□□□□ -0.48
PRPF38A-202ENST00000474048 GGA3Q9NZ52 723 aa12.04□□□□□ -0.48
PRPF38A-202ENST00000474048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.04□□□□□ -0.48
PRPF38A-202ENST00000474048 PPP2R3BQ9Y5P8 575 aa12.04□□□□□ -0.48
PRPF38A-202ENST00000474048 SCN4AP35499 1836 aa12.04□□□□□ -0.48
PRPF38A-202ENST00000474048 SH2B2O14492 632 aaPredicted RBP12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 CDKL5O76039 1030 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 CD2BP2O95400 341 aaKnown RBP12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 CALM1P0DP23 149 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 CALM2P0DP24 149 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 CALM3P0DP25 149 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 NF2P35240 595 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 EPS15P42566 896 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 LIFRP42702 1097 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 TOB2Q14106 344 aaPredicted RBP12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 RASA3Q14644 834 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 CERKLQ49MI3 558 aaPredicted RBP12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 EAPPQ56P03 285 aaPredicted RBP12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 FAM47AQ5JRC9 791 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 ANGEL2Q5VTE6 544 aaKnown RBP12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 USP50Q70EL3 339 aaPredicted RBP12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 CYB5R4Q7L1T6 521 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 PNMA8AQ86V59 439 aaPredicted RBP12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 CCDC83Q8IWF9 413 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 SULF1Q8IWU6 871 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 ZBED3Q96IU2 234 aaPredicted RBP12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 INCENPQ9NQS7 918 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 STX8Q9UNK0 236 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 SMC3Q9UQE7 1217 aa12.03□□□□□ -0.48
PRPF38A-202ENST00000474048 CCDC196A0A1B0GTZ2 297 aa12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 DDTLA6NHG4 134 aaPredicted RBP12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 GOLGA8AA7E2F4 631 aa12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 ZBTB43O43298 467 aa12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 FGRP09769 529 aa12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 RASA1P20936 1047 aa12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 EPHX2P34913 555 aa12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 METAP2P50579 478 aaKnown RBP eCLIP12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 ANTXR2P58335 489 aa12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 MICU3Q86XE3 530 aa12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 FBXL16Q8N461 479 aa12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 SLC44A5Q8NCS7 719 aa12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 TRPM4Q8TD43 1214 aa12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 ZNF274Q96GC6 653 aaPredicted RBP12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 TMEM39BQ9GZU3 492 aa12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 CWC22Q9HCG8 908 aaKnown RBP12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 PITPNM2Q9BZ72 1349 aa12.02□□□□□ -0.49
PRPF38A-202ENST00000474048 ATP2B2Q01814 1243 aa12.01□□□□□ -0.49
PRPF38A-202ENST00000474048 ABCB5Q2M3G0 1257 aa12.01□□□□□ -0.49
PRPF38A-202ENST00000474048 SUPT20HL1Q3ZLR7 823 aa12.01□□□□□ -0.49
PRPF38A-202ENST00000474048 ZFPM1Q8IX07 1006 aa12.01□□□□□ -0.49
PRPF38A-202ENST00000474048 FAM184AQ8NB25 1140 aa12.01□□□□□ -0.49
PRPF38A-202ENST00000474048 CTCFLQ8NI51 663 aaPredicted RBP12.01□□□□□ -0.49
PRPF38A-202ENST00000474048 NUP133Q8WUM0 1156 aa12.01□□□□□ -0.49
PRPF38A-202ENST00000474048 INTS4Q96HW7 963 aaKnown RBP12.01□□□□□ -0.49
PRPF38A-202ENST00000474048 DEFB129Q9H1M3 183 aa12.01□□□□□ -0.49
PRPF38A-202ENST00000474048 TPCN1Q9ULQ1 816 aa12.01□□□□□ -0.49
PRPF38A-202ENST00000474048 ISY1Q9ULR0 285 aaKnown RBP12.01□□□□□ -0.49
PRPF38A-202ENST00000474048 CLEC11AQ9Y240 323 aa12.01□□□□□ -0.49
PRPF38A-202ENST00000474048 CNTNAP1P78357 1384 aa12.01□□□□□ -0.49
PRPF38A-202ENST00000474048 DDAH1O94760 285 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 EGFRP00533 1210 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 KIF5BP33176 963 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 AKAP17AQ02040 695 aaKnown RBP12□□□□□ -0.49
PRPF38A-202ENST00000474048 GABPAQ06546 454 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 PPP2R5BQ15173 497 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 APOA5Q6Q788 366 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 TMEM179Q6ZVK1 233 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 SGMS1Q86VZ5 419 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 DGKHQ86XP1 1220 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 ENAHQ8N8S7 591 aaPredicted RBP12□□□□□ -0.49
PRPF38A-202ENST00000474048 NEDD1Q8NHV4 660 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 AGXT2Q9BYV1 514 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 SH2D4AQ9H788 454 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 LY9Q9HBG7 655 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 TCP11L1Q9NUJ3 509 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 WDR90Q96KV7 1748 aa12□□□□□ -0.49
PRPF38A-202ENST00000474048 FAM196BA6NMK8 535 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 RAD21O60216 631 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 PFKFB2O60825 505 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 TTLL1O95922 423 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 PDCP20941 246 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 RCAN1P53805 252 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 CCT2P78371 535 aaKnown RBP11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 HMGN5P82970 282 aaKnown RBP11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 EVX2Q03828 476 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 RAB3GAP1Q15042 981 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 ME3Q16798 604 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 RTN1Q16799 776 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 USP48Q86UV5 1035 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 TRIM22Q8IYM9 498 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 IGDCC4Q8TDY8 1250 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms