RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PCDHA4Q9UN74 947 aa6.13□□□□□ -1.43
BRCA1-212ENST00000473961 CCDC85CA6NKD9 419 aa6.12□□□□□ -1.43
BRCA1-212ENST00000473961 ENPP3O14638 875 aa6.12□□□□□ -1.43
BRCA1-212ENST00000473961 IBSPP21815 317 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-212ENST00000473961 CASP7P55210 303 aa6.12□□□□□ -1.43
BRCA1-212ENST00000473961 CLCQ05315 142 aa6.12□□□□□ -1.43
BRCA1-212ENST00000473961 PDE3AQ14432 1141 aa6.12□□□□□ -1.43
BRCA1-212ENST00000473961 RASA3Q14644 834 aa6.12□□□□□ -1.43
BRCA1-212ENST00000473961 PPP2R5EQ16537 467 aa6.12□□□□□ -1.43
BRCA1-212ENST00000473961 RASIP1Q5U651 963 aa6.12□□□□□ -1.43
BRCA1-212ENST00000473961 EGFLAMQ63HQ2 1017 aa6.12□□□□□ -1.43
BRCA1-212ENST00000473961 LARP1BQ659C4 914 aaKnown RBP6.12□□□□□ -1.43
BRCA1-212ENST00000473961 JAZF1Q86VZ6 243 aa6.12□□□□□ -1.43
BRCA1-212ENST00000473961 LSRQ86X29 649 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-212ENST00000473961 ZCRB1Q8TBF4 217 aaKnown RBP6.12□□□□□ -1.43
BRCA1-212ENST00000473961 ASIC4Q96FT7 647 aa6.12□□□□□ -1.43
BRCA1-212ENST00000473961 STOML1Q9UBI4 398 aa6.12□□□□□ -1.43
BRCA1-212ENST00000473961 MAPK8IP1Q9UQF2 711 aa6.12□□□□□ -1.43
BRCA1-212ENST00000473961 MRPL42Q9Y6G3 142 aaKnown RBP6.12□□□□□ -1.43
BRCA1-212ENST00000473961 FSCN2O14926 492 aa6.11□□□□□ -1.43
BRCA1-212ENST00000473961 PDPK1O15530 556 aa6.11□□□□□ -1.43
BRCA1-212ENST00000473961 SLFN14P0C7P3 912 aa6.11□□□□□ -1.43
BRCA1-212ENST00000473961 CDC25BP30305 580 aa6.11□□□□□ -1.43
BRCA1-212ENST00000473961 NFIAQ12857 509 aa6.11□□□□□ -1.43
BRCA1-212ENST00000473961 RASGRF1Q13972 1273 aa6.11□□□□□ -1.43
BRCA1-212ENST00000473961 WIPI1Q5MNZ9 446 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-212ENST00000473961 ADAMTSL4Q6UY14 1074 aa6.11□□□□□ -1.43
BRCA1-212ENST00000473961 CBLL1Q75N03 491 aa6.11□□□□□ -1.43
BRCA1-212ENST00000473961 STK35Q8TDR2 534 aa6.11□□□□□ -1.43
BRCA1-212ENST00000473961 GPBAR1Q8TDU6 330 aa6.11□□□□□ -1.43
BRCA1-212ENST00000473961 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
BRCA1-212ENST00000473961 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.11□□□□□ -1.43
BRCA1-212ENST00000473961 MSRB2Q9Y3D2 182 aa6.11□□□□□ -1.43
BRCA1-212ENST00000473961 PRR36Q9H6K5 1346 aa6.1□□□□□ -1.43
BRCA1-212ENST00000473961 MEIS3P2A8K0S8 358 aa6.1□□□□□ -1.43
BRCA1-212ENST00000473961 LINC01387J3KSC0 135 aa6.1□□□□□ -1.43
BRCA1-212ENST00000473961 GRIN3BO60391 1043 aa6.1□□□□□ -1.43
BRCA1-212ENST00000473961 GUCY2CP25092 1073 aa6.1□□□□□ -1.43
BRCA1-212ENST00000473961 NLGN1Q8N2Q7 840 aa6.1□□□□□ -1.43
BRCA1-212ENST00000473961 TAB3Q8N5C8 712 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-212ENST00000473961 TMEM40Q8WWA1 233 aa6.1□□□□□ -1.43
BRCA1-212ENST00000473961 PICK1Q9NRD5 415 aa6.1□□□□□ -1.43
BRCA1-212ENST00000473961 CACNA2D2Q9NY47 1150 aa6.1□□□□□ -1.43
BRCA1-212ENST00000473961 GMIPQ9P107 970 aa6.1□□□□□ -1.43
BRCA1-212ENST00000473961 SBNO2Q9Y2G9 1366 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 CDC45O75419 566 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 DDAH1O94760 285 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 HTR3BO95264 441 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 ITGB5P18084 799 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 MAOBP27338 520 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 MTERF2Q49AM1 385 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 HOMER1Q86YM7 354 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 ARMC10Q8N2F6 343 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 FAM169BQ8N8A8 192 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 APPBP2Q92624 585 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 ZNF669Q96BR6 464 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-212ENST00000473961 KRTAP9-3Q9BYQ3 159 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 ZC3H12CQ9C0D7 883 aaKnown RBP6.09□□□□□ -1.43
BRCA1-212ENST00000473961 ADAM30Q9UKF2 790 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 PRKAB1Q9Y478 270 aa6.09□□□□□ -1.43
BRCA1-212ENST00000473961 PPP1R12AO14974 1030 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-212ENST00000473961 GLB1P16278 677 aa6.08□□□□□ -1.44
BRCA1-212ENST00000473961 PLCG1P19174 1290 aa6.08□□□□□ -1.44
BRCA1-212ENST00000473961 NCAPHQ15003 741 aa6.08□□□□□ -1.44
BRCA1-212ENST00000473961 TCEAL1Q15170 157 aa6.08□□□□□ -1.44
BRCA1-212ENST00000473961 INTS3Q68E01 1043 aaKnown RBP6.08□□□□□ -1.44
BRCA1-212ENST00000473961 TXNDC11Q6PKC3 985 aa6.08□□□□□ -1.44
BRCA1-212ENST00000473961 AGGF1Q8N302 714 aaeCLIP6.08□□□□□ -1.44
BRCA1-212ENST00000473961 ST13P5Q8NFI4 369 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-212ENST00000473961 PLPPR2Q96GM1 343 aa6.08□□□□□ -1.44
BRCA1-212ENST00000473961 UBL7Q96S82 380 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-212ENST00000473961 USP26Q9BXU7 913 aa6.08□□□□□ -1.44
BRCA1-212ENST00000473961 PHAXQ9H814 394 aaKnown RBP6.08□□□□□ -1.44
BRCA1-212ENST00000473961 ST7Q9NRC1 585 aa6.08□□□□□ -1.44
BRCA1-212ENST00000473961 RAD18Q9NS91 495 aa6.08□□□□□ -1.44
BRCA1-212ENST00000473961 POLR3KQ9Y2Y1 108 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-212ENST00000473961 SYNGAP1Q96PV0 1343 aa6.07□□□□□ -1.44
BRCA1-212ENST00000473961 DBX1A6NMT0 343 aa6.07□□□□□ -1.44
BRCA1-212ENST00000473961 GFRA2O00451 464 aa6.07□□□□□ -1.44
BRCA1-212ENST00000473961 YARSP54577 528 aaKnown RBP6.07□□□□□ -1.44
BRCA1-212ENST00000473961 PTPN11Q06124 597 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-212ENST00000473961 KIF4BQ2VIQ3 1234 aa6.07□□□□□ -1.44
BRCA1-212ENST00000473961 ARSHQ5FYA8 562 aa6.07□□□□□ -1.44
BRCA1-212ENST00000473961 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-212ENST00000473961 EEPD1Q7L9B9 569 aa6.07□□□□□ -1.44
BRCA1-212ENST00000473961 TTC6Q86TZ1 520 aa6.07□□□□□ -1.44
BRCA1-212ENST00000473961 CELF2-AS1Q8N7Q2 184 aa6.07□□□□□ -1.44
BRCA1-212ENST00000473961 SH3TC2Q8TF17 1288 aa6.07□□□□□ -1.44
BRCA1-212ENST00000473961 RNPC3Q96LT9 517 aaKnown RBP6.07□□□□□ -1.44
BRCA1-212ENST00000473961 DBNDD2Q9BQY9 259 aa6.07□□□□□ -1.44
BRCA1-212ENST00000473961 CCDC86Q9H6F5 360 aaKnown RBP6.07□□□□□ -1.44
BRCA1-212ENST00000473961 C7orf69Q9H7B7 122 aa6.07□□□□□ -1.44
BRCA1-212ENST00000473961 REV1Q9UBZ9 1251 aa6.07□□□□□ -1.44
BRCA1-212ENST00000473961 PRAMEF27A3QJZ7 478 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 DHX15O43143 795 aaKnown RBP6.06□□□□□ -1.44
BRCA1-212ENST00000473961 NAT2P11245 290 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 CD68P34810 354 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-212ENST00000473961 ETF1P62495 437 aaKnown RBP6.06□□□□□ -1.44
BRCA1-212ENST00000473961 ZNF124Q15973 351 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 BBS9Q3SYG4 887 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms