RNA–Protein interactions for RNA: ENST00000473949.5

ARF1-206, Transcript of ADP ribosylation factor 1, humanhuman

TSL 5

Gene ARF1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-206ENST00000473949 WDR18Q9BV38 432 aa25.28■■□□□ 1.64
ARF1-206ENST00000473949 BACE1P56817 501 aa25.27■■□□□ 1.64
ARF1-206ENST00000473949 MAP3K12Q12852 859 aa25.27■■□□□ 1.64
ARF1-206ENST00000473949 HSP90AB4PQ58FF6 505 aa25.27■■□□□ 1.64
ARF1-206ENST00000473949 U2AF1L4Q8WU68 220 aaKnown RBP25.27■■□□□ 1.64
ARF1-206ENST00000473949 DPF3Q92784 378 aa25.27■■□□□ 1.64
ARF1-206ENST00000473949 MS4A1P11836 297 aa25.26■■□□□ 1.63
ARF1-206ENST00000473949 JAG1P78504 1218 aa25.26■■□□□ 1.63
ARF1-206ENST00000473949 SHROOM1Q2M3G4 852 aaPredicted RBP25.26■■□□□ 1.63
ARF1-206ENST00000473949 METTL16Q86W50 562 aaKnown RBP25.26■■□□□ 1.63
ARF1-206ENST00000473949 CERS3Q8IU89 383 aa25.26■■□□□ 1.63
ARF1-206ENST00000473949 ANTXR1Q9H6X2 564 aa25.26■■□□□ 1.63
ARF1-206ENST00000473949 IL1RAPL2Q9NP60 686 aa25.26■■□□□ 1.63
ARF1-206ENST00000473949 USP17L10C9JJH3 530 aa25.25■■□□□ 1.63
ARF1-206ENST00000473949 BCL11AQ9H165 835 aa25.25■■□□□ 1.63
ARF1-206ENST00000473949 GINM1Q9NU53 330 aa25.25■■□□□ 1.63
ARF1-206ENST00000473949 ZBTB21Q9ULJ3 1066 aa25.25■■□□□ 1.63
ARF1-206ENST00000473949 C19orf81C9J6K1 198 aa25.24■■□□□ 1.63
ARF1-206ENST00000473949 H0YGN5 161 aa25.24■■□□□ 1.63
ARF1-206ENST00000473949 APBB1O00213 710 aa25.24■■□□□ 1.63
ARF1-206ENST00000473949 HTATIP2Q9BUP3 242 aa25.24■■□□□ 1.63
ARF1-206ENST00000473949 FARP2O94887 1054 aaPredicted RBP25.23■■□□□ 1.63
ARF1-206ENST00000473949 SGPL1O95470 568 aa25.23■■□□□ 1.63
ARF1-206ENST00000473949 RHPN1Q8TCX5 695 aa25.23■■□□□ 1.63
ARF1-206ENST00000473949 MYH1P12882 1939 aa25.22■■□□□ 1.63
ARF1-206ENST00000473949 TFRCP02786 760 aaKnown RBP25.22■■□□□ 1.63
ARF1-206ENST00000473949 COLQQ9Y215 455 aaPredicted RBP25.22■■□□□ 1.63
ARF1-206ENST00000473949 DOCK3Q8IZD9 2030 aa25.22■■□□□ 1.63
ARF1-206ENST00000473949 GH2P01242 217 aa25.21■■□□□ 1.63
ARF1-206ENST00000473949 HOXA7P31268 230 aaPredicted RBP25.21■■□□□ 1.63
ARF1-206ENST00000473949 CLASRPQ8N2M8 674 aaKnown RBP25.21■■□□□ 1.63
ARF1-206ENST00000473949 DEFB118Q96PH6 123 aa25.21■■□□□ 1.63
ARF1-206ENST00000473949 P2RX7Q99572 595 aaKnown RBP25.21■■□□□ 1.63
ARF1-206ENST00000473949 HMMRO75330 724 aa25.2■■□□□ 1.62
ARF1-206ENST00000473949 TTF1Q15361 905 aaPredicted RBP25.2■■□□□ 1.62
ARF1-206ENST00000473949 TMED8Q6PL24 325 aaPredicted RBP25.2■■□□□ 1.62
ARF1-206ENST00000473949 UBE2Q1Q7Z7E8 422 aa25.2■■□□□ 1.62
ARF1-206ENST00000473949 TTC6Q86TZ1 520 aa25.2■■□□□ 1.62
ARF1-206ENST00000473949 MORF4L1Q9UBU8 362 aa25.2■■□□□ 1.62
ARF1-206ENST00000473949 SERPINB13Q9UIV8 391 aa25.2■■□□□ 1.62
ARF1-206ENST00000473949 COG6Q9Y2V7 657 aa25.2■■□□□ 1.62
ARF1-206ENST00000473949 HERVK_113P62684 666 aa25.19■■□□□ 1.62
ARF1-206ENST00000473949 USP17L2Q6R6M4 530 aa25.19■■□□□ 1.62
ARF1-206ENST00000473949 RPAP2Q8IXW5 612 aaPredicted RBP25.19■■□□□ 1.62
ARF1-206ENST00000473949 KIF1BPQ96EK5 621 aa25.19■■□□□ 1.62
ARF1-206ENST00000473949 FEZ1Q99689 392 aa25.19■■□□□ 1.62
ARF1-206ENST00000473949 DDX19BQ9UMR2 479 aa25.19■■□□□ 1.62
ARF1-206ENST00000473949 MAGEB6P1A0A0J9YX57 407 aa25.18■■□□□ 1.62
ARF1-206ENST00000473949 HMGCRP04035 888 aa25.18■■□□□ 1.62
ARF1-206ENST00000473949 IFIT2P09913 472 aaKnown RBP25.18■■□□□ 1.62
ARF1-206ENST00000473949 ZYXQ15942 572 aaKnown RBP25.18■■□□□ 1.62
ARF1-206ENST00000473949 CCAR1Q8IX12 1150 aaKnown RBP25.18■■□□□ 1.62
ARF1-206ENST00000473949 GPRC5AQ8NFJ5 357 aa25.18■■□□□ 1.62
ARF1-206ENST00000473949 DNAJC2Q99543 621 aaKnown RBP25.18■■□□□ 1.62
ARF1-206ENST00000473949 PEX10O60683 326 aa25.17■■□□□ 1.62
ARF1-206ENST00000473949 RAB3GAP1Q15042 981 aa25.17■■□□□ 1.62
ARF1-206ENST00000473949 CERKLQ49MI3 558 aaPredicted RBP25.17■■□□□ 1.62
ARF1-206ENST00000473949 SLC9C2Q5TAH2 1124 aa25.17■■□□□ 1.62
ARF1-206ENST00000473949 PAGR1Q9BTK6 254 aa25.17■■□□□ 1.62
ARF1-206ENST00000473949 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.17■■□□□ 1.621e-9■□□□□ 9.5
ARF1-206ENST00000473949 EHD4Q9H223 541 aa25.17■■□□□ 1.62
ARF1-206ENST00000473949 PAK6Q9NQU5 681 aaPredicted RBP25.17■■□□□ 1.62
ARF1-206ENST00000473949 GJD2Q9UKL4 321 aa25.17■■□□□ 1.62
ARF1-206ENST00000473949 POLR3DP05423 398 aaPredicted RBP25.16■■□□□ 1.62
ARF1-206ENST00000473949 TATDN1Q6P1N9 297 aa25.16■■□□□ 1.62
ARF1-206ENST00000473949 CHRDL2Q6WN34 429 aa25.16■■□□□ 1.62
ARF1-206ENST00000473949 TXNRD2Q9NNW7 524 aa25.16■■□□□ 1.62
ARF1-206ENST00000473949 CABP5Q9NP86 173 aa25.16■■□□□ 1.62
ARF1-206ENST00000473949 EMILIN3Q9NT22 766 aa25.16■■□□□ 1.62
ARF1-206ENST00000473949 GOLIM4O00461 696 aa25.15■■□□□ 1.62
ARF1-206ENST00000473949 PDE6AP16499 860 aa25.15■■□□□ 1.62
ARF1-206ENST00000473949 CAPN2P17655 700 aa25.15■■□□□ 1.62
ARF1-206ENST00000473949 CYP2B6P20813 491 aa25.15■■□□□ 1.62
ARF1-206ENST00000473949 ABCB5Q2M3G0 1257 aa25.15■■□□□ 1.62
ARF1-206ENST00000473949 GTF3C2Q8WUA4 911 aaPredicted RBP25.15■■□□□ 1.62
ARF1-206ENST00000473949 RIOK1Q9BRS2 568 aaKnown RBP25.15■■□□□ 1.62
ARF1-206ENST00000473949 CRNKL1Q9BZJ0 848 aaKnown RBP25.15■■□□□ 1.62
ARF1-206ENST00000473949 NR2E3Q9Y5X4 410 aa25.15■■□□□ 1.62
ARF1-206ENST00000473949 PLCD1P51178 756 aa25.14■■□□□ 1.62
ARF1-206ENST00000473949 PDE3AQ14432 1141 aa25.14■■□□□ 1.62
ARF1-206ENST00000473949 NUDT12Q9BQG2 462 aa25.14■■□□□ 1.62
ARF1-206ENST00000473949 CHMP4BQ9H444 224 aaKnown RBP25.14■■□□□ 1.62
ARF1-206ENST00000473949 CWC22Q9HCG8 908 aaKnown RBP25.14■■□□□ 1.62
ARF1-206ENST00000473949 ZBTB40Q9NUA8 1239 aa25.14■■□□□ 1.62
ARF1-206ENST00000473949 RBPJLQ9UBG7 517 aa25.14■■□□□ 1.62
ARF1-206ENST00000473949 RAB11FIP3O75154 756 aa25.13■■□□□ 1.61
ARF1-206ENST00000473949 MAPK4P31152 587 aa25.13■■□□□ 1.61
ARF1-206ENST00000473949 FXR1P51114 621 aaKnown RBP eCLIP25.13■■□□□ 1.61
ARF1-206ENST00000473949 USP14P54578 494 aa25.13■■□□□ 1.61
ARF1-206ENST00000473949 ERVK-9P63128 1117 aa25.13■■□□□ 1.61
ARF1-206ENST00000473949 ERVK-24P63145 666 aa25.13■■□□□ 1.61
ARF1-206ENST00000473949 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.13■■□□□ 1.61
ARF1-206ENST00000473949 SOCS4Q8WXH5 440 aa25.13■■□□□ 1.61
ARF1-206ENST00000473949 HMX1Q9NP08 348 aaPredicted RBP25.13■■□□□ 1.61
ARF1-206ENST00000473949 RPTORQ8N122 1335 aa25.12■■□□□ 1.61
ARF1-206ENST00000473949 ZNF532Q9HCE3 1301 aa25.12■■□□□ 1.61
ARF1-206ENST00000473949 TRIM32Q13049 653 aa25.12■■□□□ 1.61
ARF1-206ENST00000473949 SIRT2Q8IXJ6 389 aa25.12■■□□□ 1.61
ARF1-206ENST00000473949 CRISPLD2Q9H0B8 497 aa25.12■■□□□ 1.61
ARF1-206ENST00000473949 MCM9Q9NXL9 1143 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms