RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SUGT1Q9Y2Z0 365 aa20.96■□□□□ 0.95
VARS2-206ENST00000473916 KIF13BQ9NQT8 1826 aa20.96■□□□□ 0.95
VARS2-206ENST00000473916 ELP1O95163 1332 aa20.96■□□□□ 0.95
VARS2-206ENST00000473916 USP17L3A6NCW0 530 aa20.95■□□□□ 0.94
VARS2-206ENST00000473916 USP17L4A6NCW7 530 aa20.95■□□□□ 0.94
VARS2-206ENST00000473916 TROAPQ12815 778 aa20.95■□□□□ 0.94
VARS2-206ENST00000473916 USP17L1Q7RTZ2 530 aa20.95■□□□□ 0.94
VARS2-206ENST00000473916 KIAA0825Q8IV33 1275 aa20.95■□□□□ 0.94
VARS2-206ENST00000473916 PANK2Q9BZ23 570 aa20.95■□□□□ 0.94
VARS2-206ENST00000473916 PLEKHA8P1O95397 391 aa20.95■□□□□ 0.94
VARS2-206ENST00000473916 KIF23Q02241 960 aaPredicted RBP20.95■□□□□ 0.94
VARS2-206ENST00000473916 DACT2Q5SW24 774 aa20.95■□□□□ 0.94
VARS2-206ENST00000473916 KRT40Q6A162 431 aa20.95■□□□□ 0.94
VARS2-206ENST00000473916 PGBD1Q96JS3 809 aa20.95■□□□□ 0.94
VARS2-206ENST00000473916 MKNK2Q9HBH9 465 aa20.95■□□□□ 0.94
VARS2-206ENST00000473916 STK36Q9NRP7 1315 aa20.94■□□□□ 0.94
VARS2-206ENST00000473916 RASA1P20936 1047 aa20.94■□□□□ 0.94
VARS2-206ENST00000473916 CATIPQ7Z7H3 387 aa20.94■□□□□ 0.94
VARS2-206ENST00000473916 CERS3Q8IU89 383 aa20.94■□□□□ 0.94
VARS2-206ENST00000473916 AMOTL1Q8IY63 956 aa20.94■□□□□ 0.94
VARS2-206ENST00000473916 CRACR2BQ8N4Y2 399 aaPredicted RBP20.94■□□□□ 0.94
VARS2-206ENST00000473916 GRPEL1Q9HAV7 217 aa20.94■□□□□ 0.94
VARS2-206ENST00000473916 hCG_1642624A0A1W2PR95 340 aa20.94■□□□□ 0.94
VARS2-206ENST00000473916 WDHD1O75717 1129 aaPredicted RBP20.94■□□□□ 0.94
VARS2-206ENST00000473916 RCAN1P53805 252 aa20.94■□□□□ 0.94
VARS2-206ENST00000473916 MYH8P13535 1937 aa20.93■□□□□ 0.94
VARS2-206ENST00000473916 COL4A5P29400 1685 aa20.93■□□□□ 0.94
VARS2-206ENST00000473916 YDJCA8MPS7 323 aa20.93■□□□□ 0.94
VARS2-206ENST00000473916 LIG1P18858 919 aa20.93■□□□□ 0.94
VARS2-206ENST00000473916 KIAA2012Q0VF49 1180 aa20.93■□□□□ 0.94
VARS2-206ENST00000473916 APOBEC3HQ6NTF7 200 aaKnown RBP20.93■□□□□ 0.94
VARS2-206ENST00000473916 CDC42EP5Q6NZY7 148 aa20.93■□□□□ 0.94
VARS2-206ENST00000473916 TTLL6Q8N841 843 aa20.93■□□□□ 0.94
VARS2-206ENST00000473916 USP40Q9NVE5 1235 aa20.93■□□□□ 0.94
VARS2-206ENST00000473916 ATF5Q9Y2D1 282 aaPredicted RBP20.93■□□□□ 0.94
VARS2-206ENST00000473916 CDK8P49336 464 aa20.92■□□□□ 0.94
VARS2-206ENST00000473916 L1TD1Q5T7N2 865 aaKnown RBP20.92■□□□□ 0.94
VARS2-206ENST00000473916 C16orf86Q6ZW13 317 aa20.92■□□□□ 0.94
VARS2-206ENST00000473916 TEKT1Q969V4 418 aa20.92■□□□□ 0.94
VARS2-206ENST00000473916 PPIP5K2O43314 1243 aa20.92■□□□□ 0.94
VARS2-206ENST00000473916 CRKP46108 304 aa20.92■□□□□ 0.94
VARS2-206ENST00000473916 FUT2Q10981 343 aa20.92■□□□□ 0.94
VARS2-206ENST00000473916 STRIP1Q5VSL9 837 aa20.92■□□□□ 0.94
VARS2-206ENST00000473916 SLC16A10Q8TF71 515 aa20.92■□□□□ 0.94
VARS2-206ENST00000473916 SHISA4Q96DD7 197 aa20.92■□□□□ 0.94
VARS2-206ENST00000473916 CCDC196A0A1B0GTZ2 297 aa20.91■□□□□ 0.94
VARS2-206ENST00000473916 TSPY3P0CV98 308 aa20.91■□□□□ 0.94
VARS2-206ENST00000473916 TSPY8P0CW00 308 aa20.91■□□□□ 0.94
VARS2-206ENST00000473916 NFIAQ12857 509 aa20.91■□□□□ 0.94
VARS2-206ENST00000473916 CFAP45Q9UL16 551 aa20.91■□□□□ 0.94
VARS2-206ENST00000473916 KCNJ14Q9UNX9 436 aa20.91■□□□□ 0.94
VARS2-206ENST00000473916 DDAH1O94760 285 aa20.9■□□□□ 0.94
VARS2-206ENST00000473916 SLURP2P0DP57 97 aa20.9■□□□□ 0.94
VARS2-206ENST00000473916 CACNB3P54284 484 aa20.9■□□□□ 0.94
VARS2-206ENST00000473916 HHIPL2Q6UWX4 724 aa20.9■□□□□ 0.94
VARS2-206ENST00000473916 TRIM22Q8IYM9 498 aa20.9■□□□□ 0.94
VARS2-206ENST00000473916 CLIC4Q9Y696 253 aa20.9■□□□□ 0.94
VARS2-206ENST00000473916 PSME4Q14997 1843 aa20.9■□□□□ 0.94
VARS2-206ENST00000473916 CCDC183Q5T5S1 534 aa20.9■□□□□ 0.94
VARS2-206ENST00000473916 ZNF444Q8N0Y2 327 aaPredicted RBP20.9■□□□□ 0.94
VARS2-206ENST00000473916 MRE11P49959 708 aa20.89■□□□□ 0.93
VARS2-206ENST00000473916 MYSM1Q5VVJ2 828 aa20.89■□□□□ 0.93
VARS2-206ENST00000473916 LRSAM1Q6UWE0 723 aa20.89■□□□□ 0.93
VARS2-206ENST00000473916 RASGRP2Q7LDG7 609 aa20.89■□□□□ 0.93
VARS2-206ENST00000473916 SYAP1Q96A49 352 aaPredicted RBP20.89■□□□□ 0.93
VARS2-206ENST00000473916 RCOR1Q9UKL0 485 aa20.89■□□□□ 0.93
VARS2-206ENST00000473916 PKN1Q16512 942 aa20.88■□□□□ 0.93
VARS2-206ENST00000473916 CC2D2BQ6DHV5 1058 aa20.88■□□□□ 0.93
VARS2-206ENST00000473916 TMTC3Q6ZXV5 915 aa20.88■□□□□ 0.93
VARS2-206ENST00000473916 ZFPM1Q8IX07 1006 aa20.88■□□□□ 0.93
VARS2-206ENST00000473916 SRBD1Q8N5C6 995 aaKnown RBP20.88■□□□□ 0.93
VARS2-206ENST00000473916 ZNF396Q96N95 335 aaPredicted RBP20.88■□□□□ 0.93
VARS2-206ENST00000473916 RBSNQ9H1K0 784 aa20.88■□□□□ 0.93
VARS2-206ENST00000473916 ZNF277Q9NRM2 450 aaPredicted RBP20.88■□□□□ 0.93
VARS2-206ENST00000473916 SIPA1L1O43166 1804 aa20.88■□□□□ 0.93
VARS2-206ENST00000473916 UTRNP46939 3433 aa20.88■□□□□ 0.93
VARS2-206ENST00000473916 DEXIO95424 95 aa20.88■□□□□ 0.93
VARS2-206ENST00000473916 CCDC93Q567U6 631 aa20.88■□□□□ 0.93
VARS2-206ENST00000473916 BRAPQ7Z569 592 aa20.88■□□□□ 0.93
VARS2-206ENST00000473916 MTMR7Q9Y216 660 aa20.88■□□□□ 0.93
VARS2-206ENST00000473916 CNTNAP5Q8WYK1 1306 aa20.88■□□□□ 0.93
VARS2-206ENST00000473916 CALM1P0DP23 149 aa20.87■□□□□ 0.93
VARS2-206ENST00000473916 CALM2P0DP24 149 aa20.87■□□□□ 0.93
VARS2-206ENST00000473916 CALM3P0DP25 149 aa20.87■□□□□ 0.93
VARS2-206ENST00000473916 RBM5P52756 815 aaKnown RBP eCLIP20.87■□□□□ 0.93
VARS2-206ENST00000473916 TRIM29Q14134 588 aa20.87■□□□□ 0.93
VARS2-206ENST00000473916 PNMA1Q8ND90 353 aa20.87■□□□□ 0.93
VARS2-206ENST00000473916 ZDHHC15Q96MV8 337 aa20.87■□□□□ 0.93
VARS2-206ENST00000473916 KAT14Q9H8E8 782 aa20.87■□□□□ 0.93
VARS2-206ENST00000473916 ISY1Q9ULR0 285 aaKnown RBP20.87■□□□□ 0.93
VARS2-206ENST00000473916 V9GY48 417 aaPredicted RBP20.87■□□□□ 0.93
VARS2-206ENST00000473916 GOLGA6L4A6NEF3 574 aa20.87■□□□□ 0.93
VARS2-206ENST00000473916 DGKHQ86XP1 1220 aa20.87■□□□□ 0.93
VARS2-206ENST00000473916 BICD2Q8TD16 824 aa20.87■□□□□ 0.93
VARS2-206ENST00000473916 PIBF1Q8WXW3 757 aa20.87■□□□□ 0.93
VARS2-206ENST00000473916 RNF26Q9BY78 433 aaPredicted RBP20.87■□□□□ 0.93
VARS2-206ENST00000473916 RBM28Q9NW13 759 aaKnown RBP20.87■□□□□ 0.93
VARS2-206ENST00000473916 RTEL1Q9NZ71 1219 aa20.87■□□□□ 0.93
VARS2-206ENST00000473916 STX8Q9UNK0 236 aa20.87■□□□□ 0.93
VARS2-206ENST00000473916 BTBD18B2RXH4 712 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms