RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SDSP20132 328 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 SHMT1P34896 483 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 NMIQ13287 307 aaPredicted RBP15.76■□□□□ 0.11
TPM3-216ENST00000473036 MOGSQ13724 837 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 ARHGEF6Q15052 776 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 HABP4Q5JVS0 413 aaKnown RBP15.76■□□□□ 0.11
TPM3-216ENST00000473036 CTR9Q6PD62 1173 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 ZNF589Q86UQ0 364 aaPredicted RBP15.76■□□□□ 0.11
TPM3-216ENST00000473036 FOXP4Q8IVH2 680 aaPredicted RBP15.76■□□□□ 0.11
TPM3-216ENST00000473036 SCYL3Q8IZE3 742 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 SLC44A5Q8NCS7 719 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 ARMC5Q96C12 935 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 DYNLL2Q96FJ2 89 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 OTUD5Q96G74 571 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 EHD4Q9H223 541 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 IL25Q9H293 177 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 ATP8A2Q9NTI2 1148 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 HERC5Q9UII4 1024 aaKnown RBP15.76■□□□□ 0.11
TPM3-216ENST00000473036 TRIM17Q9Y577 477 aa15.76■□□□□ 0.11
TPM3-216ENST00000473036 USP17L12C9JPN9 530 aa15.75■□□□□ 0.11
TPM3-216ENST00000473036 USP17L21D6R901 530 aa15.75■□□□□ 0.11
TPM3-216ENST00000473036 IGF2BP3O00425 579 aaKnown RBP eCLIP15.75■□□□□ 0.11
TPM3-216ENST00000473036 PTPRAP18433 802 aa15.75■□□□□ 0.11
TPM3-216ENST00000473036 CAP2P40123 477 aa15.75■□□□□ 0.11
TPM3-216ENST00000473036 C12orf60Q5U649 245 aa15.75■□□□□ 0.11
TPM3-216ENST00000473036 TATDN1Q6P1N9 297 aa15.75■□□□□ 0.11
TPM3-216ENST00000473036 ERO1BQ86YB8 467 aa15.75■□□□□ 0.11
TPM3-216ENST00000473036 CCDC136Q96JN2 1154 aa15.75■□□□□ 0.11
TPM3-216ENST00000473036 GTF3C3Q9Y5Q9 886 aa15.75■□□□□ 0.11
TPM3-216ENST00000473036 TESPA1A2RU30 521 aaPredicted RBP15.74■□□□□ 0.11
TPM3-216ENST00000473036 CTNND1O60716 968 aaKnown RBP15.74■□□□□ 0.11
TPM3-216ENST00000473036 GDF11O95390 407 aa15.74■□□□□ 0.11
TPM3-216ENST00000473036 POLR3DP05423 398 aaPredicted RBP15.74■□□□□ 0.11
TPM3-216ENST00000473036 PPIL2Q13356 520 aa15.74■□□□□ 0.11
TPM3-216ENST00000473036 BRI3BPQ8WY22 251 aa15.74■□□□□ 0.11
TPM3-216ENST00000473036 R3HDMLQ9H3Y0 253 aa15.74■□□□□ 0.11
TPM3-216ENST00000473036 SERPINB13Q9UIV8 391 aa15.74■□□□□ 0.11
TPM3-216ENST00000473036 PTPN22Q9Y2R2 807 aa15.74■□□□□ 0.11
TPM3-216ENST00000473036 MYH8P13535 1937 aa15.73■□□□□ 0.11
TPM3-216ENST00000473036 PATL2C9JE40 543 aaKnown RBP15.73■□□□□ 0.11
TPM3-216ENST00000473036 HLA-DOAP06340 250 aa15.73■□□□□ 0.11
TPM3-216ENST00000473036 PPATQ06203 517 aa15.73■□□□□ 0.11
TPM3-216ENST00000473036 TTC6Q86TZ1 520 aa15.73■□□□□ 0.11
TPM3-216ENST00000473036 IFNL3Q8IZI9 196 aa15.73■□□□□ 0.11
TPM3-216ENST00000473036 HELLSQ9NRZ9 838 aa15.73■□□□□ 0.11
TPM3-216ENST00000473036 KCNH4Q9UQ05 1017 aa15.73■□□□□ 0.11
TPM3-216ENST00000473036 AFG3L2Q9Y4W6 797 aa15.73■□□□□ 0.11
TPM3-216ENST00000473036 TACC3Q9Y6A5 838 aa15.73■□□□□ 0.11
TPM3-216ENST00000473036 ZHX2Q9Y6X8 837 aa15.73■□□□□ 0.11
TPM3-216ENST00000473036 BRCA2P51587 3418 aa15.72■□□□□ 0.11
TPM3-216ENST00000473036 GUCY1A2P33402 732 aa15.72■□□□□ 0.11
TPM3-216ENST00000473036 LRRFIP1Q32MZ4 808 aaKnown RBP15.72■□□□□ 0.11
TPM3-216ENST00000473036 MCMDC2Q4G0Z9 681 aa15.72■□□□□ 0.11
TPM3-216ENST00000473036 SBK1Q52WX2 424 aa15.72■□□□□ 0.11
TPM3-216ENST00000473036 TICAM2Q86XR7 235 aa15.72■□□□□ 0.11
TPM3-216ENST00000473036 CRACR2BQ8N4Y2 399 aaPredicted RBP15.72■□□□□ 0.11
TPM3-216ENST00000473036 SP3Q02447 781 aa15.71■□□□□ 0.11
TPM3-216ENST00000473036 GIMAP6Q6P9H5 292 aa15.71■□□□□ 0.11
TPM3-216ENST00000473036 EFCC1Q9HA90 598 aa15.71■□□□□ 0.11
TPM3-216ENST00000473036 ZBTB21Q9ULJ3 1066 aa15.71■□□□□ 0.11
TPM3-216ENST00000473036 CCL15-CCL14A0A0B4J2E2 113 aa15.7■□□□□ 0.1
TPM3-216ENST00000473036 POTEFA5A3E0 1075 aa15.7■□□□□ 0.1
TPM3-216ENST00000473036 CDK8P49336 464 aa15.7■□□□□ 0.1
TPM3-216ENST00000473036 CCL15Q16663 113 aa15.7■□□□□ 0.1
TPM3-216ENST00000473036 CWC27Q6UX04 472 aaKnown RBP15.7■□□□□ 0.1
TPM3-216ENST00000473036 C16orf86Q6ZW13 317 aa15.7■□□□□ 0.1
TPM3-216ENST00000473036 NBPF11Q86T75 865 aa15.7■□□□□ 0.1
TPM3-216ENST00000473036 STK11IPQ8N1F8 1099 aa15.7■□□□□ 0.1
TPM3-216ENST00000473036 FAM43AQ8N2R8 423 aa15.7■□□□□ 0.1
TPM3-216ENST00000473036 PICK1Q9NRD5 415 aa15.7■□□□□ 0.1
TPM3-216ENST00000473036 GREB1LQ9C091 1923 aaPredicted RBP15.7■□□□□ 0.1
TPM3-216ENST00000473036 A0A0G2JLL6 359 aaPredicted RBP15.69■□□□□ 0.1
TPM3-216ENST00000473036 MINDY4BA8MYZ0 360 aa15.69■□□□□ 0.1
TPM3-216ENST00000473036 BTBD19C9JJ37 291 aa15.69■□□□□ 0.1
TPM3-216ENST00000473036 GH2P01242 217 aa15.69■□□□□ 0.1
TPM3-216ENST00000473036 HSPD1P10809 573 aaKnown RBP15.69■□□□□ 0.1
TPM3-216ENST00000473036 GNAT2P19087 354 aa15.69■□□□□ 0.1
TPM3-216ENST00000473036 GTF2A2P52657 109 aa15.69■□□□□ 0.1
TPM3-216ENST00000473036 CRHR2Q13324 411 aa15.69■□□□□ 0.1
TPM3-216ENST00000473036 CERKLQ49MI3 558 aaPredicted RBP15.69■□□□□ 0.1
TPM3-216ENST00000473036 GPAT2Q6NUI2 795 aa15.69■□□□□ 0.1
TPM3-216ENST00000473036 PRRT2Q7Z6L0 340 aaPredicted RBP15.69■□□□□ 0.1
TPM3-216ENST00000473036 TMEM106CQ9BVX2 250 aa15.69■□□□□ 0.1
TPM3-216ENST00000473036 INCENPQ9NQS7 918 aa15.69■□□□□ 0.1
TPM3-216ENST00000473036 ARPP21Q9UBL0 812 aaPredicted RBP15.69■□□□□ 0.1
TPM3-216ENST00000473036 ROBO3Q96MS0 1386 aa15.69■□□□□ 0.1
TPM3-216ENST00000473036 CCDC171Q6TFL3 1326 aa15.68■□□□□ 0.1
TPM3-216ENST00000473036 LOC285556D6RIA3 1793 aa15.68■□□□□ 0.1
TPM3-216ENST00000473036 APPP05067 770 aa15.68■□□□□ 0.1
TPM3-216ENST00000473036 AKR1B1P15121 316 aa15.68■□□□□ 0.1
TPM3-216ENST00000473036 CHMLP26374 656 aa15.68■□□□□ 0.1
TPM3-216ENST00000473036 SPP2Q13103 211 aa15.68■□□□□ 0.1
TPM3-216ENST00000473036 SNAPC2Q13487 334 aa15.68■□□□□ 0.1
TPM3-216ENST00000473036 CLEC10AQ8IUN9 316 aa15.68■□□□□ 0.1
TPM3-216ENST00000473036 SIAH1Q8IUQ4 282 aa15.68■□□□□ 0.1
TPM3-216ENST00000473036 NKX2-3Q8TAU0 364 aa15.68■□□□□ 0.1
TPM3-216ENST00000473036 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.68■□□□□ 0.1
TPM3-216ENST00000473036 KIAA0100Q14667 2235 aaKnown RBP15.67■□□□□ 0.1
TPM3-216ENST00000473036 TRIM75PA6NK02 468 aa15.67■□□□□ 0.1
TPM3-216ENST00000473036 USP17L5A8MUK1 530 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms