RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 ARID4AP29374 1257 aaPredicted RBP12.41□□□□□ -0.42
SCAMP3-205ENST00000472397 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
SCAMP3-205ENST00000472397 GCLCP48506 637 aaPredicted RBP12.41□□□□□ -0.42
SCAMP3-205ENST00000472397 PABPC4Q13310 644 aaKnown RBP eCLIP12.41□□□□□ -0.429e-8■■■■□ 25.3
SCAMP3-205ENST00000472397 WDR78Q5VTH9 848 aa12.41□□□□□ -0.42
SCAMP3-205ENST00000472397 POTEEQ6S8J3 1075 aa12.41□□□□□ -0.42
SCAMP3-205ENST00000472397 C11orf49Q9H6J7 331 aa12.41□□□□□ -0.42
SCAMP3-205ENST00000472397 AS3MTQ9HBK9 375 aa12.41□□□□□ -0.42
SCAMP3-205ENST00000472397 PI4KBQ9UBF8 816 aa12.41□□□□□ -0.42
SCAMP3-205ENST00000472397 RBPJLQ9UBG7 517 aa12.41□□□□□ -0.42
SCAMP3-205ENST00000472397 FLT1P17948 1338 aa12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 RPTORQ8N122 1335 aa12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 RANBP2P49792 3224 aaKnown RBP12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 UQCRFS1P1P0C7P4 283 aa12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 CYP7A1P22680 504 aa12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 MAGEA10P43363 369 aaPredicted RBP12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 BACE1P56817 501 aa12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 HERVK_113P62684 666 aa12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 MDM2Q00987 491 aaPredicted RBP12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 CACNB2Q08289 660 aaPredicted RBP12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 TNNI3KQ59H18 835 aa12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 CCAR1Q8IX12 1150 aaKnown RBP12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 GPRC5AQ8NFJ5 357 aa12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 NBPF3Q9H094 633 aa12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 CWC22Q9HCG8 908 aaKnown RBP12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 FPGT-TNNI3KV9GXZ4 949 aa12.4□□□□□ -0.42
SCAMP3-205ENST00000472397 PLXNB2O15031 1838 aa12.39□□□□□ -0.43
SCAMP3-205ENST00000472397 SIPA1L1O43166 1804 aa12.39□□□□□ -0.43
SCAMP3-205ENST00000472397 SURF6O75683 361 aaKnown RBP12.39□□□□□ -0.43
SCAMP3-205ENST00000472397 GH2P01242 217 aa12.39□□□□□ -0.43
SCAMP3-205ENST00000472397 EVX2Q03828 476 aa12.39□□□□□ -0.43
SCAMP3-205ENST00000472397 MTX1Q13505 466 aa12.39□□□□□ -0.43
SCAMP3-205ENST00000472397 SH3D19Q5HYK7 790 aa12.39□□□□□ -0.43
SCAMP3-205ENST00000472397 EMILIN3Q9NT22 766 aa12.39□□□□□ -0.43
SCAMP3-205ENST00000472397 MORF4L1Q9UBU8 362 aa12.39□□□□□ -0.43
SCAMP3-205ENST00000472397 ZBTB21Q9ULJ3 1066 aa12.39□□□□□ -0.43
SCAMP3-205ENST00000472397 DDX60LQ5H9U9 1706 aaKnown RBP12.39□□□□□ -0.43
SCAMP3-205ENST00000472397 PFASO15067 1338 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 LOC285556D6RIA3 1793 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 USP17L10C9JJH3 530 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 IDH1O75874 414 aaKnown RBP12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 BAG3O95817 575 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 ZKSCAN1P17029 563 aaPredicted RBP12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 USP5P45974 858 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 ATN1P54259 1190 aaPredicted RBP12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 RAB3GAP1Q15042 981 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 LRRC26Q2I0M4 334 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 CCDC158Q5M9N0 1113 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 ATF7IPQ6VMQ6 1270 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 DEFB123Q8N688 67 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 ACER1Q8TDN7 264 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 FAM161BQ96MY7 647 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 GDF15Q99988 308 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 NUDT12Q9BQG2 462 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 WDR18Q9BV38 432 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 UBE2OQ9C0C9 1292 aaKnown RBP12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 ANTXR1Q9H6X2 564 aa12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 HERC5Q9UII4 1024 aaKnown RBP12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 MYO5AQ9Y4I1 1855 aaKnown RBP12.38□□□□□ -0.43
SCAMP3-205ENST00000472397 MYCNP04198 464 aaPredicted RBP12.37□□□□□ -0.43
SCAMP3-205ENST00000472397 ASNSP08243 561 aa12.37□□□□□ -0.43
SCAMP3-205ENST00000472397 CNGA1P29973 690 aa12.37□□□□□ -0.43
SCAMP3-205ENST00000472397 ERVK-9P63128 1117 aa12.37□□□□□ -0.43
SCAMP3-205ENST00000472397 ERVK-24P63145 666 aa12.37□□□□□ -0.43
SCAMP3-205ENST00000472397 PDE3AQ14432 1141 aa12.37□□□□□ -0.43
SCAMP3-205ENST00000472397 ANO1Q5XXA6 986 aa12.37□□□□□ -0.43
SCAMP3-205ENST00000472397 GPR142Q7Z601 462 aa12.37□□□□□ -0.43
SCAMP3-205ENST00000472397 PLEKHH3Q7Z736 793 aa12.37□□□□□ -0.43
SCAMP3-205ENST00000472397 MAGEB6Q8N7X4 407 aa12.37□□□□□ -0.43
SCAMP3-205ENST00000472397 FEZ1Q99689 392 aa12.37□□□□□ -0.43
SCAMP3-205ENST00000472397 FLRT1Q9NZU1 646 aa12.37□□□□□ -0.43
SCAMP3-205ENST00000472397 APBB1O00213 710 aa12.36□□□□□ -0.43
SCAMP3-205ENST00000472397 IPO8O15397 1037 aaKnown RBP12.36□□□□□ -0.43
SCAMP3-205ENST00000472397 CNMDO75829 334 aa12.36□□□□□ -0.43
SCAMP3-205ENST00000472397 CT47B1P0C2W7 299 aaPredicted RBP12.36□□□□□ -0.43
SCAMP3-205ENST00000472397 PPP4CP60510 307 aa12.36□□□□□ -0.43
SCAMP3-205ENST00000472397 ATP8B2P98198 1209 aa12.36□□□□□ -0.43
SCAMP3-205ENST00000472397 USP17L2Q6R6M4 530 aa12.36□□□□□ -0.43
SCAMP3-205ENST00000472397 FOXP4Q8IVH2 680 aaPredicted RBP12.36□□□□□ -0.43
SCAMP3-205ENST00000472397 ARHGAP45Q92619 1136 aa12.36□□□□□ -0.43
SCAMP3-205ENST00000472397 DBNLQ9UJU6 430 aaKnown RBP12.36□□□□□ -0.43
SCAMP3-205ENST00000472397 OGDHLQ9ULD0 1010 aa12.36□□□□□ -0.43
SCAMP3-205ENST00000472397 HLA-DOAP06340 250 aa12.35□□□□□ -0.43
SCAMP3-205ENST00000472397 HOXA7P31268 230 aaPredicted RBP12.35□□□□□ -0.43
SCAMP3-205ENST00000472397 MAP3K21Q5TCX8 1036 aa12.35□□□□□ -0.43
SCAMP3-205ENST00000472397 LHX8Q68G74 356 aa12.35□□□□□ -0.43
SCAMP3-205ENST00000472397 ANKLE1Q8NAG6 615 aa12.35□□□□□ -0.43
SCAMP3-205ENST00000472397 NPLOC4Q8TAT6 608 aa12.35□□□□□ -0.43
SCAMP3-205ENST00000472397 EAF2Q96CJ1 260 aaPredicted RBP12.35□□□□□ -0.43
SCAMP3-205ENST00000472397 SENP6Q9GZR1 1112 aaPredicted RBP12.35□□□□□ -0.43
SCAMP3-205ENST00000472397 DHX36Q9H2U1 1008 aaKnown RBP12.35□□□□□ -0.43
SCAMP3-205ENST00000472397 BTBD7Q9P203 1132 aa12.35□□□□□ -0.43
SCAMP3-205ENST00000472397 COL2A1P02458 1487 aaPredicted RBP12.34□□□□□ -0.43
SCAMP3-205ENST00000472397 C19orf81C9J6K1 198 aa12.34□□□□□ -0.43
SCAMP3-205ENST00000472397 MAP4K4O95819 1239 aaPredicted RBP12.34□□□□□ -0.43
SCAMP3-205ENST00000472397 CYP2D6P10635 497 aa12.34□□□□□ -0.43
SCAMP3-205ENST00000472397 RLBP1P12271 317 aa12.34□□□□□ -0.43
SCAMP3-205ENST00000472397 PLCG2P16885 1265 aa12.34□□□□□ -0.43
SCAMP3-205ENST00000472397 CYP2C19P33261 490 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms