RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 U3KQE9 123 aa11.37□□□□□ -0.59
SGCE-210ENST00000472326 UPK3BL1B0FP48 263 aa11.36□□□□□ -0.59
SGCE-210ENST00000472326 UPK3BL2E5RIL1 263 aa11.36□□□□□ -0.59
SGCE-210ENST00000472326 RBAK-RBAKDNI3L0D1 243 aa11.36□□□□□ -0.59
SGCE-210ENST00000472326 SLITRK5O94991 958 aa11.36□□□□□ -0.59
SGCE-210ENST00000472326 HTR3BO95264 441 aa11.36□□□□□ -0.59
SGCE-210ENST00000472326 CST3P01034 146 aaPredicted RBP11.36□□□□□ -0.59
SGCE-210ENST00000472326 GRIK1P39086 918 aa11.36□□□□□ -0.59
SGCE-210ENST00000472326 CD97P48960 835 aa11.36□□□□□ -0.59
SGCE-210ENST00000472326 CPSF6Q16630 551 aaKnown RBP eCLIP11.36□□□□□ -0.59
SGCE-210ENST00000472326 MRPL41Q8IXM3 137 aaKnown RBP11.36□□□□□ -0.59
SGCE-210ENST00000472326 CAP2P40123 477 aa11.35□□□□□ -0.59
SGCE-210ENST00000472326 RIN3Q8TB24 985 aa11.35□□□□□ -0.59
SGCE-210ENST00000472326 NT5C1AQ9BXI3 368 aa11.35□□□□□ -0.59
SGCE-210ENST00000472326 ADAM30Q9UKF2 790 aa11.35□□□□□ -0.59
SGCE-210ENST00000472326 PCDHB14Q9Y5E9 798 aa11.35□□□□□ -0.59
SGCE-210ENST00000472326 ROBO2Q9HCK4 1378 aa11.35□□□□□ -0.59
SGCE-210ENST00000472326 EOMESO95936 686 aa11.34□□□□□ -0.59
SGCE-210ENST00000472326 MCM4P33991 863 aa11.34□□□□□ -0.59
SGCE-210ENST00000472326 LRP8Q14114 963 aa11.34□□□□□ -0.59
SGCE-210ENST00000472326 MCATQ8IVS2 390 aaKnown RBP11.34□□□□□ -0.59
SGCE-210ENST00000472326 ZNF654Q8IZM8 581 aa11.34□□□□□ -0.59
SGCE-210ENST00000472326 KLHL3Q9UH77 587 aa11.34□□□□□ -0.59
SGCE-210ENST00000472326 PRR36Q9H6K5 1346 aa11.34□□□□□ -0.59
SGCE-210ENST00000472326 HYAL3O43820 417 aaPredicted RBP11.33□□□□□ -0.6
SGCE-210ENST00000472326 DNAJA2O60884 412 aa11.33□□□□□ -0.6
SGCE-210ENST00000472326 SLC6A19Q695T7 634 aa11.33□□□□□ -0.6
SGCE-210ENST00000472326 INTS5Q6P9B9 1019 aaKnown RBP11.33□□□□□ -0.6
SGCE-210ENST00000472326 GK5Q6ZS86 529 aa11.33□□□□□ -0.6
SGCE-210ENST00000472326 MFSD2AQ8NA29 543 aa11.33□□□□□ -0.6
SGCE-210ENST00000472326 FAM13CQ8NE31 585 aa11.33□□□□□ -0.6
SGCE-210ENST00000472326 NKD1Q969G9 470 aa11.33□□□□□ -0.6
SGCE-210ENST00000472326 HEXIM2Q96MH2 286 aaKnown RBP11.33□□□□□ -0.6
SGCE-210ENST00000472326 ZC3H7BQ9UGR2 993 aaKnown RBP11.33□□□□□ -0.6
SGCE-210ENST00000472326 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.33□□□□□ -0.6
SGCE-210ENST00000472326 TMEM201Q5SNT2 666 aa11.32□□□□□ -0.6
SGCE-210ENST00000472326 LETMD1Q6P1Q0 360 aa11.32□□□□□ -0.6
SGCE-210ENST00000472326 FAM214BQ7L5A3 538 aa11.32□□□□□ -0.6
SGCE-210ENST00000472326 PCMTD2Q9NV79 361 aa11.32□□□□□ -0.6
SGCE-210ENST00000472326 CNTNAP4Q9C0A0 1308 aa11.32□□□□□ -0.6
SGCE-210ENST00000472326 CHURC1-FNTBB4DL54 471 aa11.31□□□□□ -0.6
SGCE-210ENST00000472326 CLCQ05315 142 aa11.31□□□□□ -0.6
SGCE-210ENST00000472326 RAD51AP2Q09MP3 1159 aa11.31□□□□□ -0.6
SGCE-210ENST00000472326 MSMPQ1L6U9 139 aa11.31□□□□□ -0.6
SGCE-210ENST00000472326 ARTNQ5T4W7 220 aa11.31□□□□□ -0.6
SGCE-210ENST00000472326 Q8N3U1 123 aa11.31□□□□□ -0.6
SGCE-210ENST00000472326 TPX2Q9ULW0 747 aaKnown RBP11.31□□□□□ -0.6
SGCE-210ENST00000472326 TCF3P15923 654 aa11.3□□□□□ -0.6
SGCE-210ENST00000472326 PAK2Q13177 524 aa11.3□□□□□ -0.6
SGCE-210ENST00000472326 CDH24Q86UP0 819 aa11.3□□□□□ -0.6
SGCE-210ENST00000472326 SLITRK4Q8IW52 837 aa11.3□□□□□ -0.6
SGCE-210ENST00000472326 KIAA1324LA8MWY0 1029 aaPredicted RBP11.29□□□□□ -0.6
SGCE-210ENST00000472326 ITIH2P19823 946 aa11.29□□□□□ -0.6
SGCE-210ENST00000472326 OXCT1P55809 520 aa11.29□□□□□ -0.6
SGCE-210ENST00000472326 ARHGAP27Q6ZUM4 889 aa11.29□□□□□ -0.6
SGCE-210ENST00000472326 PLD6Q8N2A8 252 aaKnown RBP11.29□□□□□ -0.6
SGCE-210ENST00000472326 ZFP64Q9NPA5 681 aa11.29□□□□□ -0.6
SGCE-210ENST00000472326 SPINK2P20155 84 aa11.28□□□□□ -0.6
SGCE-210ENST00000472326 ACBD3Q9H3P7 528 aa11.28□□□□□ -0.6
SGCE-210ENST00000472326 PRDM5Q9NQX1 630 aaPredicted RBP11.28□□□□□ -0.6
SGCE-210ENST00000472326 GTF2IRD1Q9UHL9 959 aa11.28□□□□□ -0.6
SGCE-210ENST00000472326 ZNF165P49910 485 aa11.27□□□□□ -0.61
SGCE-210ENST00000472326 YARSP54577 528 aaKnown RBP11.27□□□□□ -0.61
SGCE-210ENST00000472326 DTX1Q86Y01 620 aa11.27□□□□□ -0.61
SGCE-210ENST00000472326 EHMT1Q9H9B1 1298 aa11.27□□□□□ -0.61
SGCE-210ENST00000472326 E9PSI1 815 aa11.26□□□□□ -0.61
SGCE-210ENST00000472326 ADAMTS4O75173 837 aa11.26□□□□□ -0.61
SGCE-210ENST00000472326 ATE1O95260 518 aa11.26□□□□□ -0.61
SGCE-210ENST00000472326 CYB5D2Q8WUJ1 264 aa11.26□□□□□ -0.61
SGCE-210ENST00000472326 ANTXR1Q9H6X2 564 aa11.26□□□□□ -0.61
SGCE-210ENST00000472326 SLC22A31A6NKX4 558 aa11.25□□□□□ -0.61
SGCE-210ENST00000472326 PRR33A8MZF0 331 aa11.25□□□□□ -0.61
SGCE-210ENST00000472326 CEACAM5P06731 702 aa11.25□□□□□ -0.61
SGCE-210ENST00000472326 ERCC5P28715 1186 aaPredicted RBP11.25□□□□□ -0.61
SGCE-210ENST00000472326 TNNI2P48788 182 aa11.25□□□□□ -0.61
SGCE-210ENST00000472326 ARSHQ5FYA8 562 aa11.25□□□□□ -0.61
SGCE-210ENST00000472326 SLFN12Q8IYM2 578 aa11.25□□□□□ -0.61
SGCE-210ENST00000472326 REXO1Q8N1G1 1221 aaKnown RBP11.25□□□□□ -0.61
SGCE-210ENST00000472326 TGIF2Q9GZN2 237 aa11.25□□□□□ -0.61
SGCE-210ENST00000472326 CCSER2Q9H7U1 834 aa11.25□□□□□ -0.61
SGCE-210ENST00000472326 PLAGL2Q9UPG8 496 aa11.25□□□□□ -0.61
SGCE-210ENST00000472326 OVOS1Q6IE37 1185 aa11.24□□□□□ -0.61
SGCE-210ENST00000472326 PHACTR4Q8IZ21 702 aa11.24□□□□□ -0.61
SGCE-210ENST00000472326 DNAJB8Q8NHS0 232 aa11.24□□□□□ -0.61
SGCE-210ENST00000472326 NETO1Q8TDF5 533 aa11.24□□□□□ -0.61
SGCE-210ENST00000472326 PPP1R13LQ8WUF5 828 aa11.24□□□□□ -0.61
SGCE-210ENST00000472326 MAPK8IP1Q9UQF2 711 aa11.24□□□□□ -0.61
SGCE-210ENST00000472326 IGF2BP3O00425 579 aaKnown RBP eCLIP11.23□□□□□ -0.61
SGCE-210ENST00000472326 MLECQ14165 292 aa11.23□□□□□ -0.61
SGCE-210ENST00000472326 SFRP5Q5T4F7 317 aa11.23□□□□□ -0.61
SGCE-210ENST00000472326 BAHD1Q8TBE0 780 aaPredicted RBP11.23□□□□□ -0.61
SGCE-210ENST00000472326 GPRASP2Q96D09 838 aa11.23□□□□□ -0.61
SGCE-210ENST00000472326 KIF2CQ99661 725 aa11.23□□□□□ -0.61
SGCE-210ENST00000472326 GINM1Q9NU53 330 aa11.23□□□□□ -0.61
SGCE-210ENST00000472326 GMIPQ9P107 970 aa11.23□□□□□ -0.61
SGCE-210ENST00000472326 PPT2Q9UMR5 302 aa11.23□□□□□ -0.61
SGCE-210ENST00000472326 GNAT3A8MTJ3 354 aa11.22□□□□□ -0.61
SGCE-210ENST00000472326 CBX7O95931 251 aa11.22□□□□□ -0.61
SGCE-210ENST00000472326 MKNK2Q9HBH9 465 aa11.22□□□□□ -0.61
SGCE-210ENST00000472326 BSDC1Q9NW68 430 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms