RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 AKNAD1Q5T1N1 836 aa17.4■□□□□ 0.38
SMARCD3-207ENST00000472103 SAPCD2Q86UD0 394 aa17.4■□□□□ 0.38
SMARCD3-207ENST00000472103 STAG1Q8WVM7 1258 aa17.4■□□□□ 0.38
SMARCD3-207ENST00000472103 CNKSR2Q8WXI2 1034 aa17.4■□□□□ 0.38
SMARCD3-207ENST00000472103 SWAP70Q9UH65 585 aa17.4■□□□□ 0.38
SMARCD3-207ENST00000472103 GREB1LQ9C091 1923 aaPredicted RBP17.4■□□□□ 0.38
SMARCD3-207ENST00000472103 HSPA4P34932 840 aa17.39■□□□□ 0.37
SMARCD3-207ENST00000472103 CERKLQ49MI3 558 aaPredicted RBP17.39■□□□□ 0.37
SMARCD3-207ENST00000472103 NOL9Q5SY16 702 aaKnown RBP17.39■□□□□ 0.37
SMARCD3-207ENST00000472103 ANKRD13AQ8IZ07 590 aa17.39■□□□□ 0.37
SMARCD3-207ENST00000472103 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.39■□□□□ 0.37
SMARCD3-207ENST00000472103 ELP3Q9H9T3 547 aa17.39■□□□□ 0.37
SMARCD3-207ENST00000472103 PHIPQ8WWQ0 1821 aa17.39■□□□□ 0.37
SMARCD3-207ENST00000472103 CTNND1O60716 968 aaKnown RBP17.38■□□□□ 0.37
SMARCD3-207ENST00000472103 GH2P01242 217 aa17.38■□□□□ 0.37
SMARCD3-207ENST00000472103 GJA5P36382 358 aa17.38■□□□□ 0.37
SMARCD3-207ENST00000472103 FAM47AQ5JRC9 791 aa17.38■□□□□ 0.37
SMARCD3-207ENST00000472103 RRP12Q5JTH9 1297 aaKnown RBP17.38■□□□□ 0.37
SMARCD3-207ENST00000472103 CLEC10AQ8IUN9 316 aa17.38■□□□□ 0.37
SMARCD3-207ENST00000472103 SCYL3Q8IZE3 742 aa17.38■□□□□ 0.37
SMARCD3-207ENST00000472103 KCNB2Q92953 911 aa17.38■□□□□ 0.37
SMARCD3-207ENST00000472103 MKNK2Q9HBH9 465 aa17.38■□□□□ 0.37
SMARCD3-207ENST00000472103 CREBZFQ9NS37 354 aa17.38■□□□□ 0.37
SMARCD3-207ENST00000472103 ABT1Q9ULW3 272 aaKnown RBP17.38■□□□□ 0.37
SMARCD3-207ENST00000472103 B4E1Z4 1266 aa17.37■□□□□ 0.37
SMARCD3-207ENST00000472103 E7EWF7 191 aa17.37■□□□□ 0.37
SMARCD3-207ENST00000472103 ORC4O43929 436 aa17.37■□□□□ 0.37
SMARCD3-207ENST00000472103 SLC3A2P08195 630 aaKnown RBP17.37■□□□□ 0.37
SMARCD3-207ENST00000472103 PDE4BQ07343 736 aa17.37■□□□□ 0.37
SMARCD3-207ENST00000472103 ABCB5Q2M3G0 1257 aa17.37■□□□□ 0.37
SMARCD3-207ENST00000472103 ADCK5Q3MIX3 580 aa17.37■□□□□ 0.37
SMARCD3-207ENST00000472103 MFSD6Q6ZSS7 791 aa17.37■□□□□ 0.37
SMARCD3-207ENST00000472103 BACH2Q9BYV9 841 aa17.37■□□□□ 0.37
SMARCD3-207ENST00000472103 TOMM22Q9NS69 142 aa17.37■□□□□ 0.37
SMARCD3-207ENST00000472103 ZBTB21Q9ULJ3 1066 aa17.37■□□□□ 0.37
SMARCD3-207ENST00000472103 PTPRAP18433 802 aa17.36■□□□□ 0.37
SMARCD3-207ENST00000472103 SEPT2Q15019 361 aa17.36■□□□□ 0.37
SMARCD3-207ENST00000472103 SNX14Q9Y5W7 946 aa17.36■□□□□ 0.37
SMARCD3-207ENST00000472103 CSADQ9Y600 493 aa17.36■□□□□ 0.37
SMARCD3-207ENST00000472103 IGKV6D-41A0A0C4DH26 115 aa17.35■□□□□ 0.37
SMARCD3-207ENST00000472103 MPHOSPH10O00566 681 aaKnown RBP17.35■□□□□ 0.37
SMARCD3-207ENST00000472103 EPB41L2O43491 1005 aaKnown RBP17.35■□□□□ 0.37
SMARCD3-207ENST00000472103 RANBP6O60518 1105 aaKnown RBP17.35■□□□□ 0.37
SMARCD3-207ENST00000472103 TFAP4Q01664 338 aa17.35■□□□□ 0.37
SMARCD3-207ENST00000472103 RGMBQ6NW40 437 aa17.35■□□□□ 0.37
SMARCD3-207ENST00000472103 CYB5R4Q7L1T6 521 aa17.35■□□□□ 0.37
SMARCD3-207ENST00000472103 RASAL3Q86YV0 1011 aa17.35■□□□□ 0.37
SMARCD3-207ENST00000472103 ZNF444Q8N0Y2 327 aaPredicted RBP17.35■□□□□ 0.37
SMARCD3-207ENST00000472103 CCDC17Q96LX7 622 aa17.35■□□□□ 0.37
SMARCD3-207ENST00000472103 TAOK2Q9UL54 1235 aa17.35■□□□□ 0.37
SMARCD3-207ENST00000472103 SPDYE5A6NIY4 337 aa17.34■□□□□ 0.37
SMARCD3-207ENST00000472103 NMT2O60551 498 aa17.34■□□□□ 0.37
SMARCD3-207ENST00000472103 KDM4AO75164 1064 aa17.34■□□□□ 0.37
SMARCD3-207ENST00000472103 HSPA6P17066 643 aa17.34■□□□□ 0.37
SMARCD3-207ENST00000472103 MKRN3Q13064 507 aaKnown RBP17.34■□□□□ 0.37
SMARCD3-207ENST00000472103 TSGA10IPQ3SY00 556 aa17.34■□□□□ 0.37
SMARCD3-207ENST00000472103 CYP4F22Q6NT55 531 aa17.34■□□□□ 0.37
SMARCD3-207ENST00000472103 SIAH1Q8IUQ4 282 aa17.34■□□□□ 0.37
SMARCD3-207ENST00000472103 NEDD1Q8NHV4 660 aa17.34■□□□□ 0.37
SMARCD3-207ENST00000472103 SLC10A4Q96EP9 437 aa17.34■□□□□ 0.37
SMARCD3-207ENST00000472103 WNK4Q96J92 1243 aa17.34■□□□□ 0.37
SMARCD3-207ENST00000472103 RNF41Q9H4P4 317 aaPredicted RBP17.34■□□□□ 0.37
SMARCD3-207ENST00000472103 IL17RBQ9NRM6 502 aa17.34■□□□□ 0.37
SMARCD3-207ENST00000472103 PLIN4Q96Q06 1357 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 RASSF10A6NK89 507 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 TSPY2A6NKD2 308 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 FAM155AB1AL88 458 aaPredicted RBP17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 ASNSP08243 561 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 ZNF157P51786 506 aaPredicted RBP17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 ANTXR2P58335 489 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 RAB3GAP1Q15042 981 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 TMEM179Q6ZVK1 233 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 MB21D2Q8IYB1 491 aaPredicted RBP17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 ACER1Q8TDN7 264 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 OPTNQ96CV9 577 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 OTUD5Q96G74 571 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 ZIC5Q96T25 663 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 ZKSCAN3Q9BRR0 538 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 CABP5Q9NP86 173 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 ZSWIM5Q9P217 1185 aa17.33■□□□□ 0.36
SMARCD3-207ENST00000472103 PTPRFP10586 1907 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 A0A1W2PRG0 241 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 UNCXA6NJT0 531 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 USP17L5A8MUK1 530 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 SLC10A3P09131 477 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 TSPY3P0CV98 308 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 TSPY8P0CW00 308 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 PCP11498 1178 aaKnown RBP17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 CPA1P15085 419 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 DGKZQ13574 1117 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 DEFB115Q30KQ5 88 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 RNF20Q5VTR2 975 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 CHST3Q7LGC8 479 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 ERO1BQ86YB8 467 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 NCOA7Q8NI08 942 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 HHIPL1Q96JK4 782 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 KRT23Q9C075 422 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 ZNF287Q9HBT7 754 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 PICK1Q9NRD5 415 aa17.32■□□□□ 0.36
SMARCD3-207ENST00000472103 ZHX2Q9Y6X8 837 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms