RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 ERO1BQ86YB8 467 aa11.5□□□□□ -0.57
GGPS1-204ENST00000471812 EXOC6Q8TAG9 804 aa11.5□□□□□ -0.57
GGPS1-204ENST00000471812 RIOK1Q9BRS2 568 aaKnown RBP11.5□□□□□ -0.57
GGPS1-204ENST00000471812 LARP6Q9BRS8 491 aaKnown RBP11.5□□□□□ -0.57
GGPS1-204ENST00000471812 LRRCC1Q9C099 1032 aa11.5□□□□□ -0.57
GGPS1-204ENST00000471812 LOC285556D6RIA3 1793 aa11.49□□□□□ -0.57
GGPS1-204ENST00000471812 UNCXA6NJT0 531 aa11.49□□□□□ -0.57
GGPS1-204ENST00000471812 PRKAB2O43741 272 aa11.49□□□□□ -0.57
GGPS1-204ENST00000471812 CYP2D6P10635 497 aa11.49□□□□□ -0.57
GGPS1-204ENST00000471812 PTPRAP18433 802 aa11.49□□□□□ -0.57
GGPS1-204ENST00000471812 CTGFP29279 349 aa11.49□□□□□ -0.57
GGPS1-204ENST00000471812 GPAT2Q6NUI2 795 aa11.49□□□□□ -0.57
GGPS1-204ENST00000471812 SLF2Q8IX21 1173 aa11.49□□□□□ -0.57
GGPS1-204ENST00000471812 LCORLQ8N3X6 602 aa11.49□□□□□ -0.57
GGPS1-204ENST00000471812 CD99L2Q8TCZ2 262 aa11.49□□□□□ -0.57
GGPS1-204ENST00000471812 ARHGAP39Q9C0H5 1083 aa11.49□□□□□ -0.57
GGPS1-204ENST00000471812 ZNF532Q9HCE3 1301 aa11.49□□□□□ -0.57
GGPS1-204ENST00000471812 COL2A1P02458 1487 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-204ENST00000471812 GDF11O95390 407 aa11.48□□□□□ -0.57
GGPS1-204ENST00000471812 ATP5JP18859 108 aa11.48□□□□□ -0.57
GGPS1-204ENST00000471812 PDE4AP27815 886 aa11.48□□□□□ -0.57
GGPS1-204ENST00000471812 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.48□□□□□ -0.57
GGPS1-204ENST00000471812 SCYL3Q8IZE3 742 aa11.48□□□□□ -0.57
GGPS1-204ENST00000471812 SDR42E1Q8WUS8 393 aa11.48□□□□□ -0.57
GGPS1-204ENST00000471812 HAUS7Q99871 368 aa11.48□□□□□ -0.57
GGPS1-204ENST00000471812 CFHR5Q9BXR6 569 aa11.48□□□□□ -0.57
GGPS1-204ENST00000471812 ARMT1Q9H993 441 aa11.48□□□□□ -0.57
GGPS1-204ENST00000471812 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.48□□□□□ -0.57
GGPS1-204ENST00000471812 KCNH4Q9UQ05 1017 aa11.48□□□□□ -0.57
GGPS1-204ENST00000471812 ZHX2Q9Y6X8 837 aa11.48□□□□□ -0.57
GGPS1-204ENST00000471812 MGAMO43451 1857 aa11.48□□□□□ -0.57
GGPS1-204ENST00000471812 CENPFP49454 3210 aa11.47□□□□□ -0.57
GGPS1-204ENST00000471812 MYH8P13535 1937 aa11.47□□□□□ -0.57
GGPS1-204ENST00000471812 ADGRA2Q96PE1 1338 aa11.47□□□□□ -0.57
GGPS1-204ENST00000471812 SALL3Q9BXA9 1300 aa11.47□□□□□ -0.57
GGPS1-204ENST00000471812 CYP2D7A0A087X1C5 515 aa11.47□□□□□ -0.57
GGPS1-204ENST00000471812 PEX10O60683 326 aa11.47□□□□□ -0.57
GGPS1-204ENST00000471812 FKTNO75072 461 aa11.47□□□□□ -0.57
GGPS1-204ENST00000471812 GTF2A2P52657 109 aa11.47□□□□□ -0.57
GGPS1-204ENST00000471812 PPATQ06203 517 aa11.47□□□□□ -0.57
GGPS1-204ENST00000471812 LCE2DQ5TA82 110 aaPredicted RBP11.47□□□□□ -0.57
GGPS1-204ENST00000471812 SLC9C2Q5TAH2 1124 aa11.47□□□□□ -0.57
GGPS1-204ENST00000471812 CTU1Q7Z7A3 348 aaKnown RBP11.47□□□□□ -0.57
GGPS1-204ENST00000471812 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.47□□□□□ -0.57
GGPS1-204ENST00000471812 PAG1Q9NWQ8 432 aa11.47□□□□□ -0.57
GGPS1-204ENST00000471812 AFG3L2Q9Y4W6 797 aa11.47□□□□□ -0.57
GGPS1-204ENST00000471812 KIAA0100Q14667 2235 aaKnown RBP11.46□□□□□ -0.57
GGPS1-204ENST00000471812 TRIM75PA6NK02 468 aa11.46□□□□□ -0.57
GGPS1-204ENST00000471812 CCDC85CA6NKD9 419 aa11.46□□□□□ -0.57
GGPS1-204ENST00000471812 IGHDP01880 384 aa11.46□□□□□ -0.57
GGPS1-204ENST00000471812 CYP2C8P10632 490 aa11.46□□□□□ -0.57
GGPS1-204ENST00000471812 ADD2P35612 726 aa11.46□□□□□ -0.57
GGPS1-204ENST00000471812 PLCD1P51178 756 aa11.46□□□□□ -0.57
GGPS1-204ENST00000471812 MAP3K12Q12852 859 aa11.46□□□□□ -0.57
GGPS1-204ENST00000471812 SNAPC2Q13487 334 aa11.46□□□□□ -0.57
GGPS1-204ENST00000471812 TAF1CQ15572 869 aaPredicted RBP11.46□□□□□ -0.57
GGPS1-204ENST00000471812 TREML2Q5T2D2 321 aa11.46□□□□□ -0.57
GGPS1-204ENST00000471812 SLC44A5Q8NCS7 719 aa11.46□□□□□ -0.57
GGPS1-204ENST00000471812 PI4K2BQ8TCG2 481 aa11.46□□□□□ -0.57
GGPS1-204ENST00000471812 CPA4Q9UI42 421 aa11.46□□□□□ -0.57
GGPS1-204ENST00000471812 SUPT16HQ9Y5B9 1047 aaKnown RBP11.46□□□□□ -0.57
GGPS1-204ENST00000471812 MAGEB6P1A0A0J9YX57 407 aa11.45□□□□□ -0.58
GGPS1-204ENST00000471812 TBC1D12O60347 775 aa11.45□□□□□ -0.58
GGPS1-204ENST00000471812 MBD4O95243 580 aa11.45□□□□□ -0.58
GGPS1-204ENST00000471812 BAG3O95817 575 aa11.45□□□□□ -0.58
GGPS1-204ENST00000471812 CETPP11597 493 aa11.45□□□□□ -0.58
GGPS1-204ENST00000471812 INHBEP58166 350 aa11.45□□□□□ -0.58
GGPS1-204ENST00000471812 OTOP1Q7RTM1 612 aa11.45□□□□□ -0.58
GGPS1-204ENST00000471812 METTL16Q86W50 562 aaKnown RBP11.45□□□□□ -0.58
GGPS1-204ENST00000471812 HOOK2Q96ED9 719 aa11.45□□□□□ -0.58
GGPS1-204ENST00000471812 NOL10Q9BSC4 688 aaKnown RBP11.45□□□□□ -0.58
GGPS1-204ENST00000471812 PUS7LQ9H0K6 701 aaKnown RBP11.45□□□□□ -0.58
GGPS1-204ENST00000471812 CHMP4BQ9H444 224 aaKnown RBP11.45□□□□□ -0.58
GGPS1-204ENST00000471812 TNRC18O15417 2968 aaPredicted RBP11.44□□□□□ -0.58
GGPS1-204ENST00000471812 A0A0G2JLL6 359 aaPredicted RBP11.44□□□□□ -0.58
GGPS1-204ENST00000471812 PDHXO00330 501 aa11.44□□□□□ -0.58
GGPS1-204ENST00000471812 CTNND1O60716 968 aaKnown RBP11.44□□□□□ -0.58
GGPS1-204ENST00000471812 CAP2P40123 477 aa11.44□□□□□ -0.58
GGPS1-204ENST00000471812 USP5P45974 858 aa11.44□□□□□ -0.58
GGPS1-204ENST00000471812 SOX10P56693 466 aa11.44□□□□□ -0.58
GGPS1-204ENST00000471812 GADL1Q6ZQY3 521 aa11.44□□□□□ -0.58
GGPS1-204ENST00000471812 PRRT2Q7Z6L0 340 aaPredicted RBP11.44□□□□□ -0.58
GGPS1-204ENST00000471812 CLEC10AQ8IUN9 316 aa11.44□□□□□ -0.58
GGPS1-204ENST00000471812 DYNLL2Q96FJ2 89 aa11.44□□□□□ -0.58
GGPS1-204ENST00000471812 SEC62Q99442 399 aaKnown RBP11.44□□□□□ -0.58
GGPS1-204ENST00000471812 ECHDC1Q9NTX5 307 aa11.44□□□□□ -0.58
GGPS1-204ENST00000471812 HPS5Q9UPZ3 1129 aa11.44□□□□□ -0.58
GGPS1-204ENST00000471812 M0R2C6 588 aa11.43□□□□□ -0.58
GGPS1-204ENST00000471812 ALDH1A1P00352 501 aa11.43□□□□□ -0.58
GGPS1-204ENST00000471812 PLCG2P16885 1265 aa11.43□□□□□ -0.58
GGPS1-204ENST00000471812 SHMT1P34896 483 aa11.43□□□□□ -0.58
GGPS1-204ENST00000471812 SPP2Q13103 211 aa11.43□□□□□ -0.58
GGPS1-204ENST00000471812 NOM1Q5C9Z4 860 aaKnown RBP11.43□□□□□ -0.58
GGPS1-204ENST00000471812 POTEEQ6S8J3 1075 aa11.43□□□□□ -0.58
GGPS1-204ENST00000471812 OSBP2Q969R2 916 aa11.43□□□□□ -0.58
GGPS1-204ENST00000471812 DCP1AQ9NPI6 582 aaPredicted RBP11.43□□□□□ -0.58
GGPS1-204ENST00000471812 PICK1Q9NRD5 415 aa11.43□□□□□ -0.58
GGPS1-204ENST00000471812 PI4KBQ9UBF8 816 aa11.43□□□□□ -0.58
GGPS1-204ENST00000471812 TRIM17Q9Y577 477 aa11.43□□□□□ -0.58
GGPS1-204ENST00000471812 BRCA2P51587 3418 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms