RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 FZD1Q9UP38 647 aa16.67■□□□□ 0.26
SSR4-207ENST00000471724 PHF20L1A8MW92 1017 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 UBE2Q2LH0YL09 131 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 ASNSP08243 561 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 INPP5BP32019 993 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 CAP2P40123 477 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 HAND2P61296 217 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 EVX2Q03828 476 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 CERKLQ49MI3 558 aaPredicted RBP16.66■□□□□ 0.26
SSR4-207ENST00000471724 MOB2Q70IA6 237 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 SLC44A5Q8NCS7 719 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 STAG1Q8WVM7 1258 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 DYNLL2Q96FJ2 89 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 BEGAINQ9BUH8 593 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 MKNK2Q9HBH9 465 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 PICK1Q9NRD5 415 aa16.66■□□□□ 0.26
SSR4-207ENST00000471724 ORC4O43929 436 aa16.65■□□□□ 0.26
SSR4-207ENST00000471724 ZNF157P51786 506 aaPredicted RBP16.65■□□□□ 0.26
SSR4-207ENST00000471724 CTDSPL2Q05D32 466 aa16.65■□□□□ 0.26
SSR4-207ENST00000471724 C8orf34Q49A92 452 aa16.65■□□□□ 0.26
SSR4-207ENST00000471724 AKNAD1Q5T1N1 836 aa16.65■□□□□ 0.26
SSR4-207ENST00000471724 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.65■□□□□ 0.26
SSR4-207ENST00000471724 TBC1D2Q9BYX2 928 aa16.65■□□□□ 0.26
SSR4-207ENST00000471724 CABP5Q9NP86 173 aa16.65■□□□□ 0.26
SSR4-207ENST00000471724 ZBTB21Q9ULJ3 1066 aa16.65■□□□□ 0.26
SSR4-207ENST00000471724 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
SSR4-207ENST00000471724 SNCAIPQ9Y6H5 919 aa16.65■□□□□ 0.26
SSR4-207ENST00000471724 PLIN4Q96Q06 1357 aa16.64■□□□□ 0.26
SSR4-207ENST00000471724 SLURP2P0DP57 97 aa16.64■□□□□ 0.25
SSR4-207ENST00000471724 MCCP23508 829 aa16.64■□□□□ 0.25
SSR4-207ENST00000471724 ABCB5Q2M3G0 1257 aa16.64■□□□□ 0.25
SSR4-207ENST00000471724 MFSD6Q6ZSS7 791 aa16.64■□□□□ 0.25
SSR4-207ENST00000471724 TBC1D10CQ8IV04 446 aa16.64■□□□□ 0.25
SSR4-207ENST00000471724 ZKSCAN4Q969J2 545 aaPredicted RBP16.64■□□□□ 0.25
SSR4-207ENST00000471724 NBPF3Q9H094 633 aa16.64■□□□□ 0.25
SSR4-207ENST00000471724 CNNM2Q9H8M5 875 aa16.64■□□□□ 0.25
SSR4-207ENST00000471724 WBP1LQ9NX94 342 aa16.64■□□□□ 0.25
SSR4-207ENST00000471724 LOC285556D6RIA3 1793 aa16.64■□□□□ 0.25
SSR4-207ENST00000471724 SPDYE5A6NIY4 337 aa16.63■□□□□ 0.25
SSR4-207ENST00000471724 SMIM22K7EJ46 135 aa16.63■□□□□ 0.25
SSR4-207ENST00000471724 GDF11O95390 407 aa16.63■□□□□ 0.25
SSR4-207ENST00000471724 CYP21A2P08686 494 aa16.63■□□□□ 0.25
SSR4-207ENST00000471724 FGRP09769 529 aa16.63■□□□□ 0.25
SSR4-207ENST00000471724 ZKSCAN1P17029 563 aaPredicted RBP16.63■□□□□ 0.25
SSR4-207ENST00000471724 RASA1P20936 1047 aa16.63■□□□□ 0.25
SSR4-207ENST00000471724 TRDNQ13061 729 aa16.63■□□□□ 0.25
SSR4-207ENST00000471724 TMEM179Q6ZVK1 233 aa16.63■□□□□ 0.25
SSR4-207ENST00000471724 ERO1BQ86YB8 467 aa16.63■□□□□ 0.25
SSR4-207ENST00000471724 ZNF444Q8N0Y2 327 aaPredicted RBP16.63■□□□□ 0.25
SSR4-207ENST00000471724 STK11IPQ8N1F8 1099 aa16.63■□□□□ 0.25
SSR4-207ENST00000471724 SLC10A4Q96EP9 437 aa16.63■□□□□ 0.25
SSR4-207ENST00000471724 CLMNQ96JQ2 1002 aa16.63■□□□□ 0.25
SSR4-207ENST00000471724 TOMM22Q9NS69 142 aa16.63■□□□□ 0.25
SSR4-207ENST00000471724 MPHOSPH10O00566 681 aaKnown RBP16.62■□□□□ 0.25
SSR4-207ENST00000471724 SLC27A2O14975 620 aa16.62■□□□□ 0.25
SSR4-207ENST00000471724 CA12O43570 354 aa16.62■□□□□ 0.25
SSR4-207ENST00000471724 GH2P01242 217 aa16.62■□□□□ 0.25
SSR4-207ENST00000471724 SLC10A3P09131 477 aa16.62■□□□□ 0.25
SSR4-207ENST00000471724 CTCFP49711 727 aaPredicted RBP16.62■□□□□ 0.25
SSR4-207ENST00000471724 NECTIN1Q15223 517 aa16.62■□□□□ 0.25
SSR4-207ENST00000471724 CREB3L3Q68CJ9 461 aa16.62■□□□□ 0.25
SSR4-207ENST00000471724 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
SSR4-207ENST00000471724 ESR2Q92731 530 aa16.62■□□□□ 0.25
SSR4-207ENST00000471724 KRT23Q9C075 422 aa16.62■□□□□ 0.25
SSR4-207ENST00000471724 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
SSR4-207ENST00000471724 AS3MTQ9HBK9 375 aa16.62■□□□□ 0.25
SSR4-207ENST00000471724 TSPY2A6NKD2 308 aa16.61■□□□□ 0.25
SSR4-207ENST00000471724 AOC2O75106 756 aa16.61■□□□□ 0.25
SSR4-207ENST00000471724 PRDM1O75626 825 aa16.61■□□□□ 0.25
SSR4-207ENST00000471724 TSPY3P0CV98 308 aa16.61■□□□□ 0.25
SSR4-207ENST00000471724 TSPY8P0CW00 308 aa16.61■□□□□ 0.25
SSR4-207ENST00000471724 ZBTB48P10074 688 aaPredicted RBP16.61■□□□□ 0.25
SSR4-207ENST00000471724 AKR1B1P15121 316 aa16.61■□□□□ 0.25
SSR4-207ENST00000471724 HSPA4P34932 840 aa16.61■□□□□ 0.25
SSR4-207ENST00000471724 PPATQ06203 517 aa16.61■□□□□ 0.25
SSR4-207ENST00000471724 KRT32Q14532 448 aa16.61■□□□□ 0.25
SSR4-207ENST00000471724 PPP4R3BQ5MIZ7 849 aa16.61■□□□□ 0.25
SSR4-207ENST00000471724 RALYLQ86SE5 291 aaKnown RBP16.61■□□□□ 0.25
SSR4-207ENST00000471724 RASAL3Q86YV0 1011 aa16.61■□□□□ 0.25
SSR4-207ENST00000471724 NEDD4P46934 1319 aa16.61■□□□□ 0.25
SSR4-207ENST00000471724 USP17L5A8MUK1 530 aa16.6■□□□□ 0.25
SSR4-207ENST00000471724 FAM155AB1AL88 458 aaPredicted RBP16.6■□□□□ 0.25
SSR4-207ENST00000471724 RANBP6O60518 1105 aaKnown RBP16.6■□□□□ 0.25
SSR4-207ENST00000471724 PTPRAP18433 802 aa16.6■□□□□ 0.25
SSR4-207ENST00000471724 PPIL2Q13356 520 aa16.6■□□□□ 0.25
SSR4-207ENST00000471724 RRP1BQ14684 758 aaKnown RBP16.6■□□□□ 0.25
SSR4-207ENST00000471724 RRP12Q5JTH9 1297 aaKnown RBP16.6■□□□□ 0.25
SSR4-207ENST00000471724 OPTNQ96CV9 577 aa16.6■□□□□ 0.25
SSR4-207ENST00000471724 OTUD5Q96G74 571 aa16.6■□□□□ 0.25
SSR4-207ENST00000471724 WNK4Q96J92 1243 aa16.6■□□□□ 0.25
SSR4-207ENST00000471724 E7EWF7 191 aa16.59■□□□□ 0.25
SSR4-207ENST00000471724 FOXN1O15353 648 aa16.59■□□□□ 0.25
SSR4-207ENST00000471724 RAB3GAP1Q15042 981 aa16.59■□□□□ 0.25
SSR4-207ENST00000471724 NEDD1Q8NHV4 660 aa16.59■□□□□ 0.25
SSR4-207ENST00000471724 NCOA7Q8NI08 942 aa16.59■□□□□ 0.25
SSR4-207ENST00000471724 USP26Q9BXU7 913 aa16.59■□□□□ 0.25
SSR4-207ENST00000471724 KANSL2Q9H9L4 492 aa16.59■□□□□ 0.25
SSR4-207ENST00000471724 UPF2Q9HAU5 1272 aaKnown RBP16.59■□□□□ 0.25
SSR4-207ENST00000471724 ICA1Q05084 483 aa16.58■□□□□ 0.24
SSR4-207ENST00000471724 SEPT2Q15019 361 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms