RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 POU3F3P20264 500 aaPredicted RBP9.2□□□□□ -0.94
SMC5-202ENST00000471372 L1CAMP32004 1257 aa9.2□□□□□ -0.94
SMC5-202ENST00000471372 CDKN1CP49918 316 aaPredicted RBP9.2□□□□□ -0.94
SMC5-202ENST00000471372 AFF1P51825 1210 aaKnown RBP9.2□□□□□ -0.94
SMC5-202ENST00000471372 ZC3H12AQ5D1E8 599 aaKnown RBP9.2□□□□□ -0.94
SMC5-202ENST00000471372 C20orf204Q6ZNR8 217 aa9.2□□□□□ -0.94
SMC5-202ENST00000471372 THNSL2Q86YJ6 484 aa9.2□□□□□ -0.94
SMC5-202ENST00000471372 MFSD3Q96ES6 412 aa9.2□□□□□ -0.94
SMC5-202ENST00000471372 EPN3Q9H201 632 aa9.2□□□□□ -0.94
SMC5-202ENST00000471372 TYW1Q9NV66 732 aaKnown RBP9.2□□□□□ -0.94
SMC5-202ENST00000471372 TM4SF5O14894 197 aa9.19□□□□□ -0.94
SMC5-202ENST00000471372 ALBP02768 609 aa9.19□□□□□ -0.94
SMC5-202ENST00000471372 RAG1P15918 1043 aa9.19□□□□□ -0.94
SMC5-202ENST00000471372 ALAS2P22557 587 aa9.19□□□□□ -0.94
SMC5-202ENST00000471372 PABPC4Q13310 644 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMC5-202ENST00000471372 FERMT3Q86UX7 667 aa9.19□□□□□ -0.94
SMC5-202ENST00000471372 EXOC2Q96KP1 924 aa9.19□□□□□ -0.94
SMC5-202ENST00000471372 USP26Q9BXU7 913 aa9.19□□□□□ -0.94
SMC5-202ENST00000471372 FAM86C1Q9NVL1 165 aa9.19□□□□□ -0.94
SMC5-202ENST00000471372 ADAM30Q9UKF2 790 aa9.19□□□□□ -0.94
SMC5-202ENST00000471372 HIF3AQ9Y2N7 669 aa9.19□□□□□ -0.94
SMC5-202ENST00000471372 SUGT1Q9Y2Z0 365 aa9.19□□□□□ -0.94
SMC5-202ENST00000471372 PCDHGC5Q9Y5F6 944 aa9.19□□□□□ -0.94
SMC5-202ENST00000471372 A0A087X0B3 334 aa9.18□□□□□ -0.94
SMC5-202ENST00000471372 IQCA1LA6NCM1 817 aa9.18□□□□□ -0.94
SMC5-202ENST00000471372 EIF4EBP3O60516 100 aaPredicted RBP9.18□□□□□ -0.94
SMC5-202ENST00000471372 STAT3P40763 770 aa9.18□□□□□ -0.94
SMC5-202ENST00000471372 MAP2K3P46734 347 aa9.18□□□□□ -0.94
SMC5-202ENST00000471372 NLRP12P59046 1061 aa9.18□□□□□ -0.94
SMC5-202ENST00000471372 ETF1P62495 437 aaKnown RBP9.18□□□□□ -0.94
SMC5-202ENST00000471372 PPM1JQ5JR12 505 aa9.18□□□□□ -0.94
SMC5-202ENST00000471372 CCDC181Q5TID7 509 aa9.18□□□□□ -0.94
SMC5-202ENST00000471372 WDR18Q9BV38 432 aa9.18□□□□□ -0.94
SMC5-202ENST00000471372 WNT10AQ9GZT5 417 aa9.18□□□□□ -0.94
SMC5-202ENST00000471372 HOMER2Q9NSB8 354 aa9.18□□□□□ -0.94
SMC5-202ENST00000471372 ATP8A1Q9Y2Q0 1164 aa9.18□□□□□ -0.94
SMC5-202ENST00000471372 KCNQ2O43526 872 aa9.17□□□□□ -0.94
SMC5-202ENST00000471372 DLGAP3O95886 979 aa9.17□□□□□ -0.94
SMC5-202ENST00000471372 RING1Q06587 406 aa9.17□□□□□ -0.94
SMC5-202ENST00000471372 C8orf86Q6ZUL3 223 aa9.17□□□□□ -0.94
SMC5-202ENST00000471372 PPFIBP1Q86W92 1011 aa9.17□□□□□ -0.94
SMC5-202ENST00000471372 FAM13CQ8NE31 585 aa9.17□□□□□ -0.94
SMC5-202ENST00000471372 JDP2Q8WYK2 163 aa9.17□□□□□ -0.94
SMC5-202ENST00000471372 SGSM3Q96HU1 749 aa9.17□□□□□ -0.94
SMC5-202ENST00000471372 LOC100289279A0A1B0GTE1 492 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 A0A1W2PQU0 124 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 DDX3YO15523 660 aaKnown RBP9.16□□□□□ -0.94
SMC5-202ENST00000471372 RAPGEF3O95398 923 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 SV2CQ496J9 727 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 ZC3H12BQ5HYM0 836 aaKnown RBP9.16□□□□□ -0.94
SMC5-202ENST00000471372 FAM209AQ5JX71 171 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 ODR4Q5SWX8 454 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 YOD1Q5VVQ6 348 aaPredicted RBP9.16□□□□□ -0.94
SMC5-202ENST00000471372 TDRD10Q5VZ19 366 aaKnown RBP9.16□□□□□ -0.94
SMC5-202ENST00000471372 TMEM192Q8IY95 271 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 UBR7Q8N806 425 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 GALNT11Q8NCW6 608 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 CHAC2Q8WUX2 184 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 KISS1RQ969F8 398 aaPredicted RBP9.16□□□□□ -0.94
SMC5-202ENST00000471372 NCOA5Q9HCD5 579 aaKnown RBP9.16□□□□□ -0.94
SMC5-202ENST00000471372 ARHGEF4Q9NR80 690 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 MBIPQ9NS73 344 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 SLC52A1Q9NWF4 448 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 TJP2Q9UDY2 1190 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 FAN1Q9Y2M0 1017 aa9.16□□□□□ -0.94
SMC5-202ENST00000471372 ARID4BQ4LE39 1312 aaPredicted RBP9.15□□□□□ -0.94
SMC5-202ENST00000471372 PDE8AO60658 829 aa9.15□□□□□ -0.94
SMC5-202ENST00000471372 ADAM11O75078 769 aa9.15□□□□□ -0.94
SMC5-202ENST00000471372 AOC2O75106 756 aa9.15□□□□□ -0.94
SMC5-202ENST00000471372 RFPL3O75679 317 aa9.15□□□□□ -0.94
SMC5-202ENST00000471372 SUZ12Q15022 739 aaKnown RBP9.15□□□□□ -0.94
SMC5-202ENST00000471372 SETDB1Q15047 1291 aa9.15□□□□□ -0.94
SMC5-202ENST00000471372 DDX42Q86XP3 938 aaKnown RBP eCLIP9.15□□□□□ -0.94
SMC5-202ENST00000471372 WFDC8Q8IUA0 241 aa9.15□□□□□ -0.94
SMC5-202ENST00000471372 SLC6A18Q96N87 628 aa9.15□□□□□ -0.94
SMC5-202ENST00000471372 CLUHP3Q96NS8 147 aa9.15□□□□□ -0.94
SMC5-202ENST00000471372 SUSD2Q9UGT4 822 aa9.15□□□□□ -0.94
SMC5-202ENST00000471372 NSFL1CQ9UNZ2 370 aaKnown RBP9.15□□□□□ -0.94
SMC5-202ENST00000471372 CCDC163A0A0D9SF12 145 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 LILRB5O75023 590 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 TP53P04637 393 aaPredicted RBP9.14□□□□□ -0.95
SMC5-202ENST00000471372 HNRNPUQ00839 825 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMC5-202ENST00000471372 HSP90AB2PQ58FF8 381 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 ZBTB37Q5TC79 503 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 MSL1Q68DK7 614 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 SLCO4C1Q6ZQN7 724 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 MCATQ8IVS2 390 aaKnown RBP9.14□□□□□ -0.95
SMC5-202ENST00000471372 SLFN12Q8IYM2 578 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 PHACTR4Q8IZ21 702 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 GPR161Q8N6U8 529 aaKnown RBP9.14□□□□□ -0.95
SMC5-202ENST00000471372 KLHL23Q8NBE8 558 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 TMEM87BQ96K49 555 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 KIF2CQ99661 725 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 CDC6Q99741 560 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 DHRS4Q9BTZ2 278 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 CAAP1Q9H8G2 361 aa9.14□□□□□ -0.95
SMC5-202ENST00000471372 MRPS23Q9Y3D9 190 aaKnown RBP9.14□□□□□ -0.95
SMC5-202ENST00000471372 C9IYK1 514 aa9.13□□□□□ -0.95
SMC5-202ENST00000471372 M0R082 166 aa9.13□□□□□ -0.95
SMC5-202ENST00000471372 AGRPO00253 132 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms