RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 MIPEPQ99797 713 aa9.75□□□□□ -0.85
CCDC39-202ENST00000471307 FAM221AA4D161 298 aa9.74□□□□□ -0.85
CCDC39-202ENST00000471307 GBP2P32456 591 aaPredicted RBP9.74□□□□□ -0.85
CCDC39-202ENST00000471307 CLCN7P51798 805 aa9.74□□□□□ -0.85
CCDC39-202ENST00000471307 AOC3Q16853 763 aa9.74□□□□□ -0.85
CCDC39-202ENST00000471307 PRAMEF13Q5VWM6 474 aa9.74□□□□□ -0.85
CCDC39-202ENST00000471307 LETMD1Q6P1Q0 360 aa9.74□□□□□ -0.85
CCDC39-202ENST00000471307 ERMP1Q7Z2K6 904 aa9.74□□□□□ -0.85
CCDC39-202ENST00000471307 ASB11Q8WXH4 323 aa9.74□□□□□ -0.85
CCDC39-202ENST00000471307 ITIH2P19823 946 aa9.73□□□□□ -0.85
CCDC39-202ENST00000471307 BNC2Q6ZN30 1099 aaPredicted RBP9.73□□□□□ -0.85
CCDC39-202ENST00000471307 SPRED2Q7Z698 418 aa9.73□□□□□ -0.85
CCDC39-202ENST00000471307 MCATQ8IVS2 390 aaKnown RBP9.73□□□□□ -0.85
CCDC39-202ENST00000471307 SPACA3Q8IXA5 215 aa9.73□□□□□ -0.85
CCDC39-202ENST00000471307 TMEM87BQ96K49 555 aa9.73□□□□□ -0.85
CCDC39-202ENST00000471307 KRTAP4-8Q9BYQ9 185 aa9.73□□□□□ -0.85
CCDC39-202ENST00000471307 TPX2Q9ULW0 747 aaKnown RBP9.73□□□□□ -0.85
CCDC39-202ENST00000471307 PAX4O43316 350 aa9.72□□□□□ -0.85
CCDC39-202ENST00000471307 ZNF865P0CJ78 1059 aaPredicted RBP9.72□□□□□ -0.85
CCDC39-202ENST00000471307 FUT4P22083 530 aa9.72□□□□□ -0.85
CCDC39-202ENST00000471307 CYP7A1P22680 504 aa9.72□□□□□ -0.85
CCDC39-202ENST00000471307 PLCL1Q15111 1095 aa9.72□□□□□ -0.85
CCDC39-202ENST00000471307 SFRP5Q5T4F7 317 aa9.72□□□□□ -0.85
CCDC39-202ENST00000471307 ZNF574Q6ZN55 896 aaPredicted RBP9.72□□□□□ -0.85
CCDC39-202ENST00000471307 TJP2Q9UDY2 1190 aa9.72□□□□□ -0.85
CCDC39-202ENST00000471307 F13A1P00488 732 aa9.71□□□□□ -0.86
CCDC39-202ENST00000471307 CD8BP10966 210 aa9.71□□□□□ -0.86
CCDC39-202ENST00000471307 BNIP3Q12983 259 aa9.71□□□□□ -0.86
CCDC39-202ENST00000471307 MPP2Q14168 576 aa9.71□□□□□ -0.86
CCDC39-202ENST00000471307 NKPD1Q17RQ9 610 aa9.71□□□□□ -0.86
CCDC39-202ENST00000471307 TMEM201Q5SNT2 666 aa9.71□□□□□ -0.86
CCDC39-202ENST00000471307 KCNQ5Q9NR82 932 aa9.71□□□□□ -0.86
CCDC39-202ENST00000471307 PRR36Q9H6K5 1346 aa9.71□□□□□ -0.86
CCDC39-202ENST00000471307 ZNF16P17020 682 aaPredicted RBP9.7□□□□□ -0.86
CCDC39-202ENST00000471307 MFAP1P55081 439 aaKnown RBP9.7□□□□□ -0.86
CCDC39-202ENST00000471307 SNAP47Q5SQN1 464 aa9.7□□□□□ -0.86
CCDC39-202ENST00000471307 ANGEL2Q5VTE6 544 aaKnown RBP9.7□□□□□ -0.86
CCDC39-202ENST00000471307 HS2ST1Q7LGA3 356 aa9.7□□□□□ -0.86
CCDC39-202ENST00000471307 ACSF2Q96CM8 615 aaPredicted RBP9.7□□□□□ -0.86
CCDC39-202ENST00000471307 ROBO2Q9HCK4 1378 aa9.7□□□□□ -0.86
CCDC39-202ENST00000471307 F6X3S4 739 aa9.69□□□□□ -0.86
CCDC39-202ENST00000471307 KIR3DL1P43629 444 aa9.69□□□□□ -0.86
CCDC39-202ENST00000471307 MFSD4AQ8N468 514 aa9.69□□□□□ -0.86
CCDC39-202ENST00000471307 GOLM1Q8NBJ4 401 aa9.69□□□□□ -0.86
CCDC39-202ENST00000471307 KBTBD4Q9NVX7 518 aa9.69□□□□□ -0.86
CCDC39-202ENST00000471307 PLCG1P19174 1290 aa9.68□□□□□ -0.86
CCDC39-202ENST00000471307 GARTP22102 1010 aa9.68□□□□□ -0.86
CCDC39-202ENST00000471307 ETV3P41162 512 aa9.68□□□□□ -0.86
CCDC39-202ENST00000471307 YARSP54577 528 aaKnown RBP9.68□□□□□ -0.86
CCDC39-202ENST00000471307 FAM196AQ6ZSG2 479 aa9.68□□□□□ -0.86
CCDC39-202ENST00000471307 PITPNM2Q9BZ72 1349 aa9.67□□□□□ -0.86
CCDC39-202ENST00000471307 MINDY4BA8MYZ0 360 aa9.67□□□□□ -0.86
CCDC39-202ENST00000471307 JUNBP17275 347 aaPredicted RBP9.67□□□□□ -0.86
CCDC39-202ENST00000471307 ITGB5P18084 799 aa9.67□□□□□ -0.86
CCDC39-202ENST00000471307 FAM160A1Q05DH4 1040 aa9.67□□□□□ -0.86
CCDC39-202ENST00000471307 ZNF792Q3KQV3 632 aa9.67□□□□□ -0.86
CCDC39-202ENST00000471307 RIN3Q8TB24 985 aa9.67□□□□□ -0.86
CCDC39-202ENST00000471307 XAGE3Q8WTP9 111 aa9.67□□□□□ -0.86
CCDC39-202ENST00000471307 LRRC3Q9BY71 257 aa9.67□□□□□ -0.86
CCDC39-202ENST00000471307 FAM155AB1AL88 458 aaPredicted RBP9.66□□□□□ -0.86
CCDC39-202ENST00000471307 EIF4A3P38919 411 aaKnown RBP9.66□□□□□ -0.86
CCDC39-202ENST00000471307 REC114Q7Z4M0 266 aa9.66□□□□□ -0.86
CCDC39-202ENST00000471307 SLFN12Q8IYM2 578 aa9.66□□□□□ -0.86
CCDC39-202ENST00000471307 DPH2Q9BQC3 489 aaPredicted RBP9.66□□□□□ -0.86
CCDC39-202ENST00000471307 SUPT16HQ9Y5B9 1047 aaKnown RBP9.66□□□□□ -0.86
CCDC39-202ENST00000471307 CORINQ9Y5Q5 1042 aa9.66□□□□□ -0.86
CCDC39-202ENST00000471307 CAPN6Q9Y6Q1 641 aa9.66□□□□□ -0.86
CCDC39-202ENST00000471307 CWF19L2Q2TBE0 894 aaKnown RBP9.65□□□□□ -0.86
CCDC39-202ENST00000471307 SLC23A3Q6PIS1 610 aa9.65□□□□□ -0.86
CCDC39-202ENST00000471307 THAP5Q7Z6K1 395 aa9.65□□□□□ -0.86
CCDC39-202ENST00000471307 FAM13CQ8NE31 585 aa9.65□□□□□ -0.86
CCDC39-202ENST00000471307 PI4K2BQ8TCG2 481 aa9.65□□□□□ -0.86
CCDC39-202ENST00000471307 CYB5D2Q8WUJ1 264 aa9.65□□□□□ -0.86
CCDC39-202ENST00000471307 FMNL2Q96PY5 1086 aa9.65□□□□□ -0.86
CCDC39-202ENST00000471307 COPRSQ9NQ92 184 aa9.65□□□□□ -0.86
CCDC39-202ENST00000471307 LMCD1Q9NZU5 365 aa9.65□□□□□ -0.86
CCDC39-202ENST00000471307 GGT7Q9UJ14 662 aa9.65□□□□□ -0.86
CCDC39-202ENST00000471307 CEP131Q9UPN4 1083 aa9.65□□□□□ -0.86
CCDC39-202ENST00000471307 CNTNAP4Q9C0A0 1308 aa9.64□□□□□ -0.87
CCDC39-202ENST00000471307 RBM47A0AV96 593 aaKnown RBP9.64□□□□□ -0.87
CCDC39-202ENST00000471307 PRR33A8MZF0 331 aa9.64□□□□□ -0.87
CCDC39-202ENST00000471307 BIN1O00499 593 aa9.64□□□□□ -0.87
CCDC39-202ENST00000471307 GREM1O60565 184 aa9.64□□□□□ -0.87
CCDC39-202ENST00000471307 CD96P40200 585 aa9.64□□□□□ -0.87
CCDC39-202ENST00000471307 IKZF1Q13422 519 aa9.64□□□□□ -0.87
CCDC39-202ENST00000471307 FBXL19Q6PCT2 694 aa9.64□□□□□ -0.87
CCDC39-202ENST00000471307 CDH24Q86UP0 819 aa9.64□□□□□ -0.87
CCDC39-202ENST00000471307 DNAJB8Q8NHS0 232 aa9.64□□□□□ -0.87
CCDC39-202ENST00000471307 PIWIL2Q8TC59 973 aaKnown RBP9.64□□□□□ -0.87
CCDC39-202ENST00000471307 HTR3BO95264 441 aa9.63□□□□□ -0.87
CCDC39-202ENST00000471307 ASIC4Q96FT7 647 aa9.63□□□□□ -0.87
CCDC39-202ENST00000471307 SEMA3GQ9NS98 782 aa9.63□□□□□ -0.87
CCDC39-202ENST00000471307 REV1Q9UBZ9 1251 aa9.63□□□□□ -0.87
CCDC39-202ENST00000471307 POLR3KQ9Y2Y1 108 aaPredicted RBP9.63□□□□□ -0.87
CCDC39-202ENST00000471307 ST14Q9Y5Y6 855 aa9.63□□□□□ -0.87
CCDC39-202ENST00000471307 CBX7O95931 251 aa9.62□□□□□ -0.87
CCDC39-202ENST00000471307 MLECQ14165 292 aa9.62□□□□□ -0.87
CCDC39-202ENST00000471307 ATG4DQ86TL0 474 aaPredicted RBP9.62□□□□□ -0.87
CCDC39-202ENST00000471307 TMEM87AQ8NBN3 555 aa9.62□□□□□ -0.87
CCDC39-202ENST00000471307 HSPA12BQ96MM6 686 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms