RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 SOWAHBA6NEL2 793 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 FYB1O15117 783 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 BUB1BO60566 1050 aaPredicted RBP4.77□□□□□ -1.65
VPS50-210ENST00000471188 PFKFB2O60825 505 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 FSBPO95073 299 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 UBTFL1P0CB47 393 aaPredicted RBP4.77□□□□□ -1.65
VPS50-210ENST00000471188 MCM3P25205 808 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 FNTAP49354 379 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 SMTNP53814 917 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 CCT2P78371 535 aaKnown RBP4.77□□□□□ -1.65
VPS50-210ENST00000471188 ATP8B2P98198 1209 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 GRIK3Q13003 919 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 NCAPHQ15003 741 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 LONRF3Q496Y0 759 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 THEMIS2Q5TEJ8 643 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 PPFIBP1Q86W92 1011 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 IL17RAQ96F46 866 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 HOOK1Q9UJC3 728 aaKnown RBP4.77□□□□□ -1.65
VPS50-210ENST00000471188 ADCY9O60503 1353 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 NSD2O96028 1365 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 HSP90AB2PQ58FF8 381 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 SPECC1Q5M775 1068 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 SPECC1LQ69YQ0 1117 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 CAPRIN2Q6IMN6 1127 aaKnown RBP4.77□□□□□ -1.65
VPS50-210ENST00000471188 NFXL1Q6ZNB6 911 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 SND1Q7KZF4 910 aaKnown RBP eCLIP4.77□□□□□ -1.65
VPS50-210ENST00000471188 MCM10Q7L590 875 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 FMR1NBQ8N0W7 255 aaPredicted RBP4.77□□□□□ -1.65
VPS50-210ENST00000471188 ENGASEQ8NFI3 743 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 RHPN1Q8TCX5 695 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 LMBR1Q8WVP7 490 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 BORCS6Q96GS4 357 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 VIPAS39Q9H9C1 493 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 PLCH2O75038 1416 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 NPATQ14207 1427 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 EIF4E1BA6NMX2 242 aaKnown RBP4.77□□□□□ -1.65
VPS50-210ENST00000471188 ENC1O14682 589 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 SLC27A2O14975 620 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 SHOX2O60902 331 aaPredicted RBP4.77□□□□□ -1.65
VPS50-210ENST00000471188 RTN2O75298 545 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 GIGYF1O75420 1035 aaPredicted RBP4.77□□□□□ -1.65
VPS50-210ENST00000471188 A1BGP04217 495 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 RPS6KB1P23443 525 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 SLC8A1P32418 973 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 AARSP49588 968 aaKnown RBP eCLIP4.77□□□□□ -1.65
VPS50-210ENST00000471188 MYO1EQ12965 1108 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 WHAMMP3Q1A5X7 153 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 CCDC70Q6NSX1 233 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 CYB5D1Q6P9G0 228 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 CCDC50Q8IVM0 306 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 KIAA0232Q92628 1395 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 FAM227BQ96M60 508 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 FAM210AQ96ND0 272 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 SELENOOQ9BVL4 669 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 HAUS2Q9NVX0 235 aa4.77□□□□□ -1.65
VPS50-210ENST00000471188 MYO1BO43795 1136 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 GLRX3O76003 335 aaKnown RBP4.76□□□□□ -1.65
VPS50-210ENST00000471188 MYBL1P10243 752 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 PECAM1P16284 738 aaPredicted RBP4.76□□□□□ -1.65
VPS50-210ENST00000471188 RANBP1P43487 201 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 RPS6KA3P51812 740 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 WLSQ5T9L3 541 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 MYSM1Q5VVJ2 828 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 SYNE3Q6ZMZ3 975 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 SPATS2Q86XZ4 545 aaKnown RBP4.76□□□□□ -1.65
VPS50-210ENST00000471188 TMEM139Q8IV31 216 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 SH2D3CQ8N5H7 860 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 TC2NQ8N9U0 490 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 PI4K2BQ8TCG2 481 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 CERKQ8TCT0 537 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 VCPKMTQ9H867 229 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 GUCA1BQ9UMX6 200 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 AKR1B15C9JRZ8 316 aaPredicted RBP4.76□□□□□ -1.65
VPS50-210ENST00000471188 E7EVH7 732 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 PES1O00541 588 aaKnown RBP4.76□□□□□ -1.65
VPS50-210ENST00000471188 IKBKBO14920 756 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 OPA1O60313 960 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 CSB-PGBD3P0DP91 1061 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 MARCKSP29966 332 aaPredicted RBP4.76□□□□□ -1.65
VPS50-210ENST00000471188 SEC24CP53992 1094 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 TUBB2AQ13885 445 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 TOB2Q14106 344 aaPredicted RBP4.76□□□□□ -1.65
VPS50-210ENST00000471188 NECTIN1Q15223 517 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 ADALQ6DHV7 355 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 Q6ZUG5 572 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 PPP1R42Q7Z4L9 355 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 HDGFL2Q7Z4V5 671 aaPredicted RBP4.76□□□□□ -1.65
VPS50-210ENST00000471188 C3orf20Q8ND61 904 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 ACRBPQ8NEB7 543 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 NSMCE1Q8WV22 266 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 SEC62Q99442 399 aaKnown RBP4.76□□□□□ -1.65
VPS50-210ENST00000471188 BPIFA3Q9BQP9 254 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 TUBB2BQ9BVA1 445 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 PPANQ9NQ55 473 aaKnown RBP4.76□□□□□ -1.65
VPS50-210ENST00000471188 TPX2Q9ULW0 747 aaKnown RBP4.76□□□□□ -1.65
VPS50-210ENST00000471188 TAF6LQ9Y6J9 622 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 CLTCQ00610 1675 aaKnown RBP4.76□□□□□ -1.65
VPS50-210ENST00000471188 SPATA31D1Q6ZQQ2 1576 aa4.76□□□□□ -1.65
VPS50-210ENST00000471188 A0A1W2PP64 1363 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 ANKRD18BA2A2Z9 1011 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms