RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 FAM26DQ5JW98 314 aa8.28□□□□□ -1.08
GPNMB-208ENST00000470994 POU5F2Q8N7G0 328 aa8.28□□□□□ -1.08
GPNMB-208ENST00000470994 C12orf50Q8NA57 414 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-208ENST00000470994 AGBL5Q8NDL9 886 aa8.28□□□□□ -1.08
GPNMB-208ENST00000470994 YIPF2Q9BWQ6 316 aa8.28□□□□□ -1.08
GPNMB-208ENST00000470994 CXXC1Q9P0U4 656 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-208ENST00000470994 KANSL3Q9P2N6 904 aa8.28□□□□□ -1.08
GPNMB-208ENST00000470994 DLC1Q96QB1 1528 aa8.28□□□□□ -1.08
GPNMB-208ENST00000470994 SPATA31A1Q5TZJ5 1347 aa8.28□□□□□ -1.08
GPNMB-208ENST00000470994 GLI3P10071 1580 aa8.27□□□□□ -1.09
GPNMB-208ENST00000470994 FMN2Q9NZ56 1722 aa8.27□□□□□ -1.09
GPNMB-208ENST00000470994 FAM95CA0A1B0GW59 222 aa8.27□□□□□ -1.09
GPNMB-208ENST00000470994 EIF4EBP3O60516 100 aaPredicted RBP8.27□□□□□ -1.09
GPNMB-208ENST00000470994 PCSK2P16519 638 aa8.27□□□□□ -1.09
GPNMB-208ENST00000470994 CES1P23141 567 aa8.27□□□□□ -1.09
GPNMB-208ENST00000470994 USP11P51784 963 aa8.27□□□□□ -1.09
GPNMB-208ENST00000470994 CBLL1Q75N03 491 aa8.27□□□□□ -1.09
GPNMB-208ENST00000470994 TCP11L2Q8N4U5 519 aa8.27□□□□□ -1.09
GPNMB-208ENST00000470994 SMG8Q8ND04 991 aaKnown RBP8.27□□□□□ -1.09
GPNMB-208ENST00000470994 TTC16Q8NEE8 873 aa8.27□□□□□ -1.09
GPNMB-208ENST00000470994 SUGCTQ9HAC7 445 aa8.27□□□□□ -1.09
GPNMB-208ENST00000470994 BSDC1Q9NW68 430 aaPredicted RBP8.27□□□□□ -1.09
GPNMB-208ENST00000470994 KIF1AQ12756 1690 aa8.27□□□□□ -1.09
GPNMB-208ENST00000470994 CENPJQ9HC77 1338 aaPredicted RBP8.27□□□□□ -1.09
GPNMB-208ENST00000470994 USP32Q8NFA0 1604 aa8.26□□□□□ -1.09
GPNMB-208ENST00000470994 GCP02774 474 aa8.26□□□□□ -1.09
GPNMB-208ENST00000470994 PMEPA1Q969W9 287 aa8.26□□□□□ -1.09
GPNMB-208ENST00000470994 TMEM63CQ9P1W3 806 aa8.26□□□□□ -1.09
GPNMB-208ENST00000470994 SALL4Q9UJQ4 1053 aa8.26□□□□□ -1.09
GPNMB-208ENST00000470994 ADGRB1O14514 1584 aa8.26□□□□□ -1.09
GPNMB-208ENST00000470994 TULP4Q9NRJ4 1543 aa8.25□□□□□ -1.09
GPNMB-208ENST00000470994 CYP26A1O43174 497 aa8.25□□□□□ -1.09
GPNMB-208ENST00000470994 C8AP07357 584 aa8.25□□□□□ -1.09
GPNMB-208ENST00000470994 IKBKEQ14164 716 aa8.25□□□□□ -1.09
GPNMB-208ENST00000470994 NFKBIBQ15653 356 aa8.25□□□□□ -1.09
GPNMB-208ENST00000470994 SIN3AQ96ST3 1273 aa8.25□□□□□ -1.09
GPNMB-208ENST00000470994 USP26Q9BXU7 913 aa8.25□□□□□ -1.09
GPNMB-208ENST00000470994 TMPRSS13Q9BYE2 586 aa8.25□□□□□ -1.09
GPNMB-208ENST00000470994 DZANK1Q9NVP4 752 aa8.25□□□□□ -1.09
GPNMB-208ENST00000470994 SOX13Q9UN79 622 aa8.25□□□□□ -1.09
GPNMB-208ENST00000470994 KNDC1Q76NI1 1749 aa8.24□□□□□ -1.09
GPNMB-208ENST00000470994 TIAF1O95411 115 aa8.24□□□□□ -1.09
GPNMB-208ENST00000470994 TOM1L2Q6ZVM7 507 aa8.24□□□□□ -1.09
GPNMB-208ENST00000470994 BSNDQ8WZ55 320 aa8.24□□□□□ -1.09
GPNMB-208ENST00000470994 CAMKK2Q96RR4 588 aa8.24□□□□□ -1.09
GPNMB-208ENST00000470994 ZMIZ1Q9ULJ6 1067 aa8.24□□□□□ -1.09
GPNMB-208ENST00000470994 ITGB5P18084 799 aa8.23□□□□□ -1.09
GPNMB-208ENST00000470994 TMEM102Q8N9M5 508 aaPredicted RBP8.23□□□□□ -1.09
GPNMB-208ENST00000470994 FLCNQ8NFG4 579 aa8.23□□□□□ -1.09
GPNMB-208ENST00000470994 TBC1D32Q96NH3 1257 aa8.23□□□□□ -1.09
GPNMB-208ENST00000470994 EVC2Q86UK5 1308 aa8.23□□□□□ -1.09
GPNMB-208ENST00000470994 POLR3AO14802 1390 aaPredicted RBP8.22□□□□□ -1.09
GPNMB-208ENST00000470994 NFKBIEO00221 500 aa8.22□□□□□ -1.09
GPNMB-208ENST00000470994 XKR5Q6UX68 686 aa8.22□□□□□ -1.09
GPNMB-208ENST00000470994 SOX17Q9H6I2 414 aaPredicted RBP8.22□□□□□ -1.09
GPNMB-208ENST00000470994 CNTN3Q9P232 1028 aa8.22□□□□□ -1.09
GPNMB-208ENST00000470994 THRAP3Q9Y2W1 955 aaKnown RBP8.22□□□□□ -1.09
GPNMB-208ENST00000470994 IFT172Q9UG01 1749 aa8.22□□□□□ -1.09
GPNMB-208ENST00000470994 PPIP5K1Q6PFW1 1433 aa8.21□□□□□ -1.09
GPNMB-208ENST00000470994 SSH2Q76I76 1423 aa8.21□□□□□ -1.09
GPNMB-208ENST00000470994 ATP7BP35670 1465 aa8.21□□□□□ -1.09
GPNMB-208ENST00000470994 LOC100289279A0A1B0GTE1 492 aa8.21□□□□□ -1.1
GPNMB-208ENST00000470994 ZBTB39O15060 712 aa8.21□□□□□ -1.1
GPNMB-208ENST00000470994 DDB1Q16531 1140 aa8.21□□□□□ -1.1
GPNMB-208ENST00000470994 DUSP27Q5VZP5 1158 aa8.21□□□□□ -1.1
GPNMB-208ENST00000470994 CAPN12Q6ZSI9 719 aa8.21□□□□□ -1.1
GPNMB-208ENST00000470994 ZAR1Q86SH2 424 aa8.21□□□□□ -1.1
GPNMB-208ENST00000470994 STK32AQ8WU08 396 aa8.21□□□□□ -1.1
GPNMB-208ENST00000470994 FBLIM1Q8WUP2 373 aa8.21□□□□□ -1.1
GPNMB-208ENST00000470994 PPP1R1BQ9UD71 204 aaPredicted RBP8.21□□□□□ -1.1
GPNMB-208ENST00000470994 ADGRB2O60241 1585 aa8.2□□□□□ -1.1
GPNMB-208ENST00000470994 ACPPP15309 386 aa8.2□□□□□ -1.1
GPNMB-208ENST00000470994 CYP27A1Q02318 531 aa8.2□□□□□ -1.1
GPNMB-208ENST00000470994 EXOSC6Q5RKV6 272 aaKnown RBP8.2□□□□□ -1.1
GPNMB-208ENST00000470994 C1orf127Q8N9H9 656 aa8.2□□□□□ -1.1
GPNMB-208ENST00000470994 TMC1Q8TDI8 760 aa8.2□□□□□ -1.1
GPNMB-208ENST00000470994 USP19O94966 1318 aa8.2□□□□□ -1.1
GPNMB-208ENST00000470994 SOX1O00570 391 aaPredicted RBP8.19□□□□□ -1.1
GPNMB-208ENST00000470994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.19□□□□□ -1.1
GPNMB-208ENST00000470994 TTC21BQ7Z4L5 1316 aa8.19□□□□□ -1.1
GPNMB-208ENST00000470994 RGPD8O14715 1765 aaPredicted RBP8.19□□□□□ -1.1
GPNMB-208ENST00000470994 ROCK2O75116 1388 aaKnown RBP8.19□□□□□ -1.1
GPNMB-208ENST00000470994 CPDO75976 1380 aa8.19□□□□□ -1.1
GPNMB-208ENST00000470994 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.18□□□□□ -1.1
GPNMB-208ENST00000470994 EXOC5O00471 708 aa8.18□□□□□ -1.1
GPNMB-208ENST00000470994 BIN1O00499 593 aa8.18□□□□□ -1.1
GPNMB-208ENST00000470994 EDN3P14138 238 aa8.18□□□□□ -1.1
GPNMB-208ENST00000470994 HP1BP3Q5SSJ5 553 aaPredicted RBP8.18□□□□□ -1.1
GPNMB-208ENST00000470994 KCNH5Q8NCM2 988 aa8.18□□□□□ -1.1
GPNMB-208ENST00000470994 OSMRQ99650 979 aa8.18□□□□□ -1.1
GPNMB-208ENST00000470994 SPON1Q9HCB6 807 aa8.18□□□□□ -1.1
GPNMB-208ENST00000470994 PRKAG2Q9UGJ0 569 aa8.18□□□□□ -1.1
GPNMB-208ENST00000470994 MARF1Q9Y4F3 1742 aaKnown RBP8.17□□□□□ -1.1
GPNMB-208ENST00000470994 COL14A1Q05707 1796 aaKnown RBP8.17□□□□□ -1.1
GPNMB-208ENST00000470994 MAP7Q14244 749 aa8.17□□□□□ -1.1
GPNMB-208ENST00000470994 C8orf34Q49A92 452 aa8.17□□□□□ -1.1
GPNMB-208ENST00000470994 HGSNATQ68CP4 663 aa8.17□□□□□ -1.1
GPNMB-208ENST00000470994 CDPF1Q6NVV7 123 aa8.17□□□□□ -1.1
GPNMB-208ENST00000470994 PTF1AQ7RTS3 328 aa8.17□□□□□ -1.1
GPNMB-208ENST00000470994 VN1R5Q7Z5H4 357 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms