RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 TRIM29Q14134 588 aa12.86□□□□□ -0.35
SRGAP3-204ENST00000470951 MORC3Q14149 939 aa12.86□□□□□ -0.35
SRGAP3-204ENST00000470951 POSTNQ15063 836 aa12.86□□□□□ -0.35
SRGAP3-204ENST00000470951 CCDC51Q96ER9 411 aa12.86□□□□□ -0.35
SRGAP3-204ENST00000470951 MRPL44Q9H9J2 332 aaKnown RBP12.86□□□□□ -0.35
SRGAP3-204ENST00000470951 MYO1AQ9UBC5 1043 aa12.86□□□□□ -0.35
SRGAP3-204ENST00000470951 LCMT1Q9UIC8 334 aa12.86□□□□□ -0.35
SRGAP3-204ENST00000470951 ANGEL1Q9UNK9 670 aaKnown RBP12.86□□□□□ -0.35
SRGAP3-204ENST00000470951 PARP4Q9UKK3 1724 aaKnown RBP12.86□□□□□ -0.35
SRGAP3-204ENST00000470951 EYA2O00167 538 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 ZNF213O14771 459 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 FOXP2O15409 715 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 MAFGO15525 162 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 CDC27P30260 824 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 MAGEA9P43362 315 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 METAP2P50579 478 aaKnown RBP eCLIP12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 TIMM10P62072 90 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 KARSQ15046 597 aaKnown RBP12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 WHAMMP3Q1A5X7 153 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 HSP90B2PQ58FF3 399 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 RASGRP2Q7LDG7 609 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 KRT28Q7Z3Y7 464 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 APPBP2Q92624 585 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 ITFG2Q969R8 447 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 GJB4Q9NTQ9 266 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 TTF2Q9UNY4 1162 aaKnown RBP12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 STK36Q9NRP7 1315 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 CTAGE9A4FU28 777 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 FECHP22830 423 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 MCM6Q14566 821 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 LRCH2Q5VUJ6 765 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 PPFIBP1Q86W92 1011 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 RIPOR2Q9Y4F9 1068 aa12.85□□□□□ -0.35
SRGAP3-204ENST00000470951 WDR17Q8IZU2 1322 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 TRIM66O15016 1216 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 PLCD1P51178 756 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 HAND2P61296 217 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 CLIC6Q96NY7 704 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 CTAGE1Q96RT6 745 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 DESI2Q9BSY9 194 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 VIPAS39Q9H9C1 493 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 TOMM22Q9NS69 142 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 KDM6AO15550 1401 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 SEMA3EO15041 775 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 GCP02774 474 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 SLC39A6Q13433 755 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 WASHC4Q2M389 1173 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 EXOC8Q8IYI6 725 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 SPATA20Q8TB22 786 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 WASF1Q92558 559 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 ZNF496Q96IT1 587 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 DEF6Q9H4E7 631 aa12.84□□□□□ -0.35
SRGAP3-204ENST00000470951 TJP1Q07157 1748 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 CTAGE15A4D2H0 777 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 CTAGE8P0CG41 777 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 MCM3P25205 808 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 HSPA1LP34931 641 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 FMR1Q06787 632 aaKnown RBP eCLIP12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 KIF4BQ2VIQ3 1234 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 WDR93Q6P2C0 686 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 CTAGE6Q86UF2 777 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 CNGA4Q8IV77 575 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 CTAGE4Q8IX94 777 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 TMEM87BQ96K49 555 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 PNKPQ96T60 521 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 ABCB6Q9NP58 842 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 SOWAHDA6NJG2 315 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 PTPREP23469 700 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 CASP8Q14790 479 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 APOA5Q6Q788 366 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 CTCFLQ8NI51 663 aaPredicted RBP12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 DRC1Q96MC2 740 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 LZTFL1Q9NQ48 299 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 AKAP2Q9Y2D5 859 aa12.83□□□□□ -0.36
SRGAP3-204ENST00000470951 NUP188Q5SRE5 1749 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 ITIH6Q6UXX5 1313 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 ATP5J2-PTCD1G3V325 749 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 SH2B2O14492 632 aaPredicted RBP12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 PTCD1O75127 700 aaKnown RBP12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 PBX1P40424 430 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 IARSP41252 1262 aaKnown RBP12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 NOSTRINQ8IVI9 506 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 TTC5Q8N0Z6 440 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 PPM1EQ8WY54 764 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 NAPGQ99747 312 aaPredicted RBP12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 CEP126Q9P2H0 1117 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 PUF60Q9UHX1 559 aaKnown RBP12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 FAN1Q9Y2M0 1017 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 MYH8P13535 1937 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 NHSL1Q5SYE7 1610 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 MFAP3LO75121 409 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 FKBP4Q02790 459 aaKnown RBP eCLIP12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 MTF1Q14872 753 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 PTPN21Q16825 1174 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 FILIP1LQ4L180 1135 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 RILPL1Q5EBL4 403 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms