RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 APOBRQ0VD83 1088 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 STK3Q13188 491 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 CERKLQ49MI3 558 aaPredicted RBP11.44□□□□□ -0.58
CCM2-204ENST00000470837 PNMA8AQ86V59 439 aaPredicted RBP11.44□□□□□ -0.58
CCM2-204ENST00000470837 SULF1Q8IWU6 871 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 SLC44A5Q8NCS7 719 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 TRPM4Q8TD43 1214 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 ZNF274Q96GC6 653 aaPredicted RBP11.44□□□□□ -0.58
CCM2-204ENST00000470837 AGXT2Q9BYV1 514 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 TMEM39BQ9GZU3 492 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 DEFB129Q9H1M3 183 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 KAT14Q9H8E8 782 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 CWC22Q9HCG8 908 aaKnown RBP11.44□□□□□ -0.58
CCM2-204ENST00000470837 GGA3Q9NZ52 723 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 TPCN1Q9ULQ1 816 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 PPP2R3BQ9Y5P8 575 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 TIAM2Q8IVF5 1701 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 CCDC196A0A1B0GTZ2 297 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 SMIM22K7EJ46 135 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 ZBTB43O43298 467 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 EGFRP00533 1210 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 CALM1P0DP23 149 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 CALM2P0DP24 149 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 CALM3P0DP25 149 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 EPHX2P34913 555 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 METAP2P50579 478 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCM2-204ENST00000470837 EVX2Q03828 476 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 GABPAQ06546 454 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 SUPT20HL1Q3ZLR7 823 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 DCAF15Q66K64 600 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 DGKHQ86XP1 1220 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 CCDC83Q8IWF9 413 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 NEDD1Q8NHV4 660 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 IGDCC4Q8TDY8 1250 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 INTS4Q96HW7 963 aaKnown RBP11.43□□□□□ -0.58
CCM2-204ENST00000470837 LY9Q9HBG7 655 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 FOXD4L1Q9NU39 408 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 TCP11L1Q9NUJ3 509 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 STX8Q9UNK0 236 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 SMC3Q9UQE7 1217 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 KIF3AQ9Y496 699 aa11.43□□□□□ -0.58
CCM2-204ENST00000470837 PITPNM2Q9BZ72 1349 aa11.42□□□□□ -0.58
CCM2-204ENST00000470837 TBC1D12O60347 775 aa11.42□□□□□ -0.58
CCM2-204ENST00000470837 CDKL5O76039 1030 aa11.42□□□□□ -0.58
CCM2-204ENST00000470837 ME3Q16798 604 aa11.42□□□□□ -0.58
CCM2-204ENST00000470837 ABCB5Q2M3G0 1257 aa11.42□□□□□ -0.58
CCM2-204ENST00000470837 EAPPQ56P03 285 aaPredicted RBP11.42□□□□□ -0.58
CCM2-204ENST00000470837 SH3BP5LQ7L8J4 393 aa11.42□□□□□ -0.58
CCM2-204ENST00000470837 SGMS1Q86VZ5 419 aa11.42□□□□□ -0.58
CCM2-204ENST00000470837 ENAHQ8N8S7 591 aaPredicted RBP11.42□□□□□ -0.58
CCM2-204ENST00000470837 ZC3H15Q8WU90 426 aaKnown RBP11.42□□□□□ -0.58
CCM2-204ENST00000470837 TACC3Q9Y6A5 838 aa11.42□□□□□ -0.58
CCM2-204ENST00000470837 NAV1Q8NEY1 1877 aa11.42□□□□□ -0.58
CCM2-204ENST00000470837 CNTNAP1P78357 1384 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 GOLGA8AA7E2F4 631 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 PFKFB2O60825 505 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 PDIA3P30101 505 aaKnown RBP11.41□□□□□ -0.58
CCM2-204ENST00000470837 SHMT1P34896 483 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 NF2P35240 595 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 RCAN1P53805 252 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 EVCP57679 992 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 CCT2P78371 535 aaKnown RBP11.41□□□□□ -0.58
CCM2-204ENST00000470837 ATP2B2Q01814 1243 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 CUL4AQ13619 759 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 PPP2R5BQ15173 497 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 APOA5Q6Q788 366 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 TMEM179Q6ZVK1 233 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 METTL16Q86W50 562 aaKnown RBP11.41□□□□□ -0.58
CCM2-204ENST00000470837 MICU3Q86XE3 530 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 NECAB1Q8N987 351 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 CTCFLQ8NI51 663 aaPredicted RBP11.41□□□□□ -0.58
CCM2-204ENST00000470837 NUP133Q8WUM0 1156 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 GTF3C6Q969F1 213 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
CCM2-204ENST00000470837 CLEC11AQ9Y240 323 aa11.41□□□□□ -0.58
CCM2-204ENST00000470837 ASTN2O75129 1339 aaPredicted RBP11.4□□□□□ -0.58
CCM2-204ENST00000470837 LAMA4Q16363 1823 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 FAM196BA6NMK8 535 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 NMT2O60551 498 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 DDAH1O94760 285 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 TTLL1O95922 423 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 TOP1P11387 765 aaKnown RBP11.4□□□□□ -0.58
CCM2-204ENST00000470837 AKR1B1P15121 316 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 KIF5BP33176 963 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 HIRAP54198 1017 aaPredicted RBP11.4□□□□□ -0.58
CCM2-204ENST00000470837 COL9A3Q14050 684 aaPredicted RBP11.4□□□□□ -0.58
CCM2-204ENST00000470837 RAB3GAP1Q15042 981 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 SEC23AQ15436 765 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 RTN1Q16799 776 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 TATDN1Q6P1N9 297 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 MIGA2Q7L4E1 593 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 KRT26Q7Z3Y9 468 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 ZNF654Q8IZM8 581 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 FAM184AQ8NB25 1140 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 LLPHQ9BRT6 129 aaKnown RBP11.4□□□□□ -0.58
CCM2-204ENST00000470837 TAF1DQ9H5J8 278 aaPredicted RBP11.4□□□□□ -0.58
CCM2-204ENST00000470837 KANSL2Q9H9L4 492 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 RBM28Q9NW13 759 aaKnown RBP11.4□□□□□ -0.58
CCM2-204ENST00000470837 BRPF3Q9ULD4 1205 aa11.4□□□□□ -0.58
CCM2-204ENST00000470837 ZNF646O15015 1829 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms