RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 FDX2Q6P4F2 183 aa6.01□□□□□ -1.45
PRPF3-204ENST00000470824 PODNQ7Z5L7 613 aa6.01□□□□□ -1.45
PRPF3-204ENST00000470824 MCATQ8IVS2 390 aaKnown RBP6.01□□□□□ -1.45
PRPF3-204ENST00000470824 BEND7Q8N7W2 519 aaPredicted RBP6.01□□□□□ -1.45
PRPF3-204ENST00000470824 FAM13CQ8NE31 585 aa6.01□□□□□ -1.45
PRPF3-204ENST00000470824 ACSF2Q96CM8 615 aaPredicted RBP6.01□□□□□ -1.45
PRPF3-204ENST00000470824 SCARF2Q96GP6 870 aaPredicted RBP6.01□□□□□ -1.45
PRPF3-204ENST00000470824 PIDD1Q9HB75 910 aa6.01□□□□□ -1.45
PRPF3-204ENST00000470824 FAM221BA6H8Z2 402 aa6□□□□□ -1.45
PRPF3-204ENST00000470824 TNFRSF10CO14798 259 aa6□□□□□ -1.45
PRPF3-204ENST00000470824 PDPK1O15530 556 aa6□□□□□ -1.45
PRPF3-204ENST00000470824 DNAJA2O60884 412 aa6□□□□□ -1.45
PRPF3-204ENST00000470824 DRD2P14416 443 aa6□□□□□ -1.45
PRPF3-204ENST00000470824 ASPAP45381 313 aa6□□□□□ -1.45
PRPF3-204ENST00000470824 IFRD2Q12894 506 aaPredicted RBP6□□□□□ -1.45
PRPF3-204ENST00000470824 TTLL4Q14679 1199 aa6□□□□□ -1.45
PRPF3-204ENST00000470824 UNC5AQ6ZN44 842 aa6□□□□□ -1.45
PRPF3-204ENST00000470824 MRPL41Q8IXM3 137 aaKnown RBP6□□□□□ -1.45
PRPF3-204ENST00000470824 FAM178BQ8IXR5 827 aa6□□□□□ -1.45
PRPF3-204ENST00000470824 TMEM87BQ96K49 555 aa6□□□□□ -1.45
PRPF3-204ENST00000470824 SSU72Q9NP77 194 aaKnown RBP6□□□□□ -1.45
PRPF3-204ENST00000470824 TJP2Q9UDY2 1190 aa6□□□□□ -1.45
PRPF3-204ENST00000470824 MAPK8IP1Q9UQF2 711 aa6□□□□□ -1.45
PRPF3-204ENST00000470824 UPK3BL1B0FP48 263 aa5.99□□□□□ -1.45
PRPF3-204ENST00000470824 UPK3BL2E5RIL1 263 aa5.99□□□□□ -1.45
PRPF3-204ENST00000470824 F8W735 103 aaPredicted RBP5.99□□□□□ -1.45
PRPF3-204ENST00000470824 RNGTTO60942 597 aaKnown RBP5.99□□□□□ -1.45
PRPF3-204ENST00000470824 TIAF1O95411 115 aa5.99□□□□□ -1.45
PRPF3-204ENST00000470824 IGHA1P01876 353 aa5.99□□□□□ -1.45
PRPF3-204ENST00000470824 HCLS1P14317 486 aaPredicted RBP5.99□□□□□ -1.45
PRPF3-204ENST00000470824 NTF4P34130 210 aa5.99□□□□□ -1.45
PRPF3-204ENST00000470824 RASGRF1Q13972 1273 aa5.99□□□□□ -1.45
PRPF3-204ENST00000470824 JAZF1Q86VZ6 243 aa5.99□□□□□ -1.45
PRPF3-204ENST00000470824 SLFN12Q8IYM2 578 aa5.99□□□□□ -1.45
PRPF3-204ENST00000470824 MICAL1Q8TDZ2 1067 aa5.99□□□□□ -1.45
PRPF3-204ENST00000470824 SLC9A7Q96T83 725 aa5.99□□□□□ -1.45
PRPF3-204ENST00000470824 GSX1Q9H4S2 264 aaPredicted RBP5.99□□□□□ -1.45
PRPF3-204ENST00000470824 PHAXQ9H814 394 aaKnown RBP5.99□□□□□ -1.45
PRPF3-204ENST00000470824 SART1O43290 800 aaKnown RBP5.98□□□□□ -1.45
PRPF3-204ENST00000470824 CLSTN1O94985 981 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 GJB6O95452 261 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 NEFMP07197 916 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 SPATA31C1P0DKV0 1188 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 ACRP10323 421 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 CAP2P40123 477 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 CCNFP41002 786 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 NCAPHQ15003 741 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 ZYXQ15942 572 aaKnown RBP5.98□□□□□ -1.45
PRPF3-204ENST00000470824 GRIK4Q16099 956 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 SHISA2Q6UWI4 295 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 C6orf15Q6UXA7 325 aaPredicted RBP5.98□□□□□ -1.45
PRPF3-204ENST00000470824 PHACTR4Q8IZ21 702 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 AGGF1Q8N302 714 aaeCLIP5.98□□□□□ -1.452e-6■■□□□ 12.1
PRPF3-204ENST00000470824 C2CD4AQ8NCU7 369 aaPredicted RBP5.98□□□□□ -1.45
PRPF3-204ENST00000470824 LENG1Q96BZ8 264 aaPredicted RBP5.98□□□□□ -1.45
PRPF3-204ENST00000470824 DHRS1Q96LJ7 313 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 CEP41Q9BYV8 373 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 AKTIPQ9H8T0 292 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 FBRSQ9HAH7 460 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 USP21Q9UK80 565 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 MRPL42Q9Y6G3 142 aaKnown RBP5.98□□□□□ -1.45
PRPF3-204ENST00000470824 LTBP3Q9NS15 1303 aa5.98□□□□□ -1.45
PRPF3-204ENST00000470824 RGS13O14921 159 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 CST3P01034 146 aaPredicted RBP5.97□□□□□ -1.45
PRPF3-204ENST00000470824 GBP1P32455 592 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 USP11P51784 963 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 CHMP4BP1P59074 171 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 NRG1Q02297 640 aaPredicted RBP5.97□□□□□ -1.45
PRPF3-204ENST00000470824 NKG7Q16617 165 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 VHLLQ6RSH7 139 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.97□□□□□ -1.45
PRPF3-204ENST00000470824 SMYD4Q8IYR2 804 aaPredicted RBP5.97□□□□□ -1.45
PRPF3-204ENST00000470824 NLGN1Q8N2Q7 840 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 ISL2Q96A47 359 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 CCDC74BQ96LY2 380 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 NACC1Q96RE7 527 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 DNAJC7Q99615 494 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 PCOLCE2Q9UKZ9 415 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 ACTL7BQ9Y614 415 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 CNTNAP5Q8WYK1 1306 aa5.97□□□□□ -1.45
PRPF3-204ENST00000470824 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.96□□□□□ -1.46
PRPF3-204ENST00000470824 FAM86C2PA6NEL3 165 aa5.96□□□□□ -1.46
PRPF3-204ENST00000470824 B2RBV5 119 aa5.96□□□□□ -1.46
PRPF3-204ENST00000470824 C9orf172C9J069 976 aa5.96□□□□□ -1.46
PRPF3-204ENST00000470824 GAS2O43903 313 aaKnown RBP5.96□□□□□ -1.46
PRPF3-204ENST00000470824 ALX3O95076 343 aa5.96□□□□□ -1.46
PRPF3-204ENST00000470824 APBA3O96018 575 aa5.96□□□□□ -1.46
PRPF3-204ENST00000470824 SLC7A5Q01650 507 aa5.96□□□□□ -1.46
PRPF3-204ENST00000470824 SLBPQ14493 270 aaKnown RBP eCLIP5.96□□□□□ -1.46
PRPF3-204ENST00000470824 BBS9Q3SYG4 887 aa5.96□□□□□ -1.46
PRPF3-204ENST00000470824 MTERF2Q49AM1 385 aa5.96□□□□□ -1.46
PRPF3-204ENST00000470824 ST13P5Q8NFI4 369 aaPredicted RBP5.96□□□□□ -1.46
PRPF3-204ENST00000470824 RNPC3Q96LT9 517 aaKnown RBP5.96□□□□□ -1.46
PRPF3-204ENST00000470824 KIF2CQ99661 725 aa5.96□□□□□ -1.46
PRPF3-204ENST00000470824 FOXQ1Q9C009 403 aa5.96□□□□□ -1.46
PRPF3-204ENST00000470824 FAM105AQ9NUU6 356 aa5.96□□□□□ -1.46
PRPF3-204ENST00000470824 LRIG2O94898 1065 aa5.95□□□□□ -1.46
PRPF3-204ENST00000470824 GLB1P16278 677 aa5.95□□□□□ -1.46
PRPF3-204ENST00000470824 NCLP19338 710 aaKnown RBP5.95□□□□□ -1.46
PRPF3-204ENST00000470824 HSD3B2P26439 372 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms