RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 RANBP2P49792 3224 aaKnown RBP16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 USP17L10C9JJH3 530 aa16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 BCAR3O75815 825 aa16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 CYP2B6P20813 491 aa16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 HOXA7P31268 230 aaPredicted RBP16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 HERVK_113P62684 666 aa16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 C7orf61Q8IZ16 206 aa16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 GPRC5AQ8NFJ5 357 aa16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 DIS3LQ8TF46 1054 aaKnown RBP16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 GTF3C2Q8WUA4 911 aaPredicted RBP16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 SOCS4Q8WXH5 440 aa16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 P2RX7Q99572 595 aaKnown RBP16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 DBNDD2Q9BQY9 259 aa16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 NBPF3Q9H094 633 aa16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 CWC22Q9HCG8 908 aaKnown RBP16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 STAP2Q9UGK3 403 aa16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 TNNQ9UQP3 1299 aa16.97■□□□□ 0.31
SEMA3F-208ENST00000470737 PLXNB2O15031 1838 aa16.96■□□□□ 0.31
SEMA3F-208ENST00000470737 GDF11O95390 407 aa16.96■□□□□ 0.31
SEMA3F-208ENST00000470737 ZKSCAN2Q63HK3 967 aa16.96■□□□□ 0.31
SEMA3F-208ENST00000470737 TRMT44Q8IYL2 757 aaKnown RBP16.96■□□□□ 0.31
SEMA3F-208ENST00000470737 TMEM57Q8N5G2 664 aa16.96■□□□□ 0.31
SEMA3F-208ENST00000470737 PALD1Q9ULE6 856 aa16.96■□□□□ 0.31
SEMA3F-208ENST00000470737 ZBTB21Q9ULJ3 1066 aa16.96■□□□□ 0.31
SEMA3F-208ENST00000470737 MYH1P12882 1939 aa16.96■□□□□ 0.3
SEMA3F-208ENST00000470737 DDX60LQ5H9U9 1706 aaKnown RBP16.96■□□□□ 0.3
SEMA3F-208ENST00000470737 SURF6O75683 361 aaKnown RBP16.95■□□□□ 0.3
SEMA3F-208ENST00000470737 CYP2E1P05181 493 aaPredicted RBP16.95■□□□□ 0.3
SEMA3F-208ENST00000470737 MAPK4P31152 587 aa16.95■□□□□ 0.3
SEMA3F-208ENST00000470737 TRIM32Q13049 653 aa16.95■□□□□ 0.3
SEMA3F-208ENST00000470737 TRIB2Q92519 343 aa16.95■□□□□ 0.3
SEMA3F-208ENST00000470737 ZNF512BQ96KM6 892 aaPredicted RBP16.95■□□□□ 0.3
SEMA3F-208ENST00000470737 C11orf49Q9H6J7 331 aa16.95■□□□□ 0.3
SEMA3F-208ENST00000470737 SAP30BPQ9UHR5 308 aaKnown RBP16.95■□□□□ 0.3
SEMA3F-208ENST00000470737 XRCC5P13010 732 aaKnown RBP16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 PRKAR2AP13861 404 aaKnown RBP16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 ZKSCAN1P17029 563 aaPredicted RBP16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 CYP7A1P22680 504 aa16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 ZAP70P43403 619 aa16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 ATP8B2P98198 1209 aa16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 POLA2Q14181 598 aa16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 USP17L2Q6R6M4 530 aa16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 ADGRA1Q86SQ6 560 aa16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 METTL16Q86W50 562 aaKnown RBP16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 CERS3Q8IU89 383 aa16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 FTSJ3Q8IY81 847 aaKnown RBP16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 SSH3Q8TE77 659 aa16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 PAGR1Q9BTK6 254 aa16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 DNAJC18Q9H819 358 aa16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 ZMYND8Q9ULU4 1186 aaPredicted RBP16.94■□□□□ 0.3
SEMA3F-208ENST00000470737 IDH1O75874 414 aaKnown RBP16.93■□□□□ 0.3
SEMA3F-208ENST00000470737 RGS2P41220 211 aa16.93■□□□□ 0.3
SEMA3F-208ENST00000470737 USP5P45974 858 aa16.93■□□□□ 0.3
SEMA3F-208ENST00000470737 ERVK-9P63128 1117 aa16.93■□□□□ 0.3
SEMA3F-208ENST00000470737 ERVK-24P63145 666 aa16.93■□□□□ 0.3
SEMA3F-208ENST00000470737 FEZ1Q99689 392 aa16.93■□□□□ 0.3
SEMA3F-208ENST00000470737 OGDHLQ9ULD0 1010 aa16.93■□□□□ 0.3
SEMA3F-208ENST00000470737 BMP8BP34820 402 aa16.92■□□□□ 0.3
SEMA3F-208ENST00000470737 DYNLL1P63167 89 aaKnown RBP16.92■□□□□ 0.3
SEMA3F-208ENST00000470737 JAG1P78504 1218 aa16.92■□□□□ 0.3
SEMA3F-208ENST00000470737 PLEKHH3Q7Z736 793 aa16.92■□□□□ 0.3
SEMA3F-208ENST00000470737 TXNRD2Q9NNW7 524 aa16.92■□□□□ 0.3
SEMA3F-208ENST00000470737 PIH1D3Q9NQM4 214 aaKnown RBP16.92■□□□□ 0.3
SEMA3F-208ENST00000470737 GLRX3O76003 335 aaKnown RBP16.91■□□□□ 0.3
SEMA3F-208ENST00000470737 USP14P54578 494 aa16.91■□□□□ 0.3
SEMA3F-208ENST00000470737 CCNA1P78396 465 aa16.91■□□□□ 0.3
SEMA3F-208ENST00000470737 MAP3K21Q5TCX8 1036 aa16.91■□□□□ 0.3
SEMA3F-208ENST00000470737 GPR142Q7Z601 462 aa16.91■□□□□ 0.3
SEMA3F-208ENST00000470737 GDF15Q99988 308 aa16.91■□□□□ 0.3
SEMA3F-208ENST00000470737 CCDC8Q9H0W5 538 aaPredicted RBP16.91■□□□□ 0.3
SEMA3F-208ENST00000470737 C1orf115Q9H7X2 142 aa16.91■□□□□ 0.3
SEMA3F-208ENST00000470737 RBPJLQ9UBG7 517 aa16.91■□□□□ 0.3
SEMA3F-208ENST00000470737 USP17L15C9J2P7 530 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 USP17L13C9JLJ4 530 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 USP17L11C9JVI0 530 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 USP17L18D6R9N7 530 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 USP17L22D6RA61 530 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 USP17L17D6RBQ6 530 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 USP17L19D6RCP7 530 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 USP17L20D6RJB6 530 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 SOX1O00570 391 aaPredicted RBP16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 PEX10O60683 326 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 GH2P01242 217 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 USP17L24Q0WX57 530 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 ZYXQ15942 572 aaKnown RBP16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 SHROOM1Q2M3G4 852 aaPredicted RBP16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 ITPRIPQ8IWB1 547 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 MAGEB6Q8N7X4 407 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 MIGA1Q8NAN2 632 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 SLC17A8Q8NDX2 589 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 LRCH3Q96II8 777 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 APBA2Q99767 749 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 PORCNQ9H237 461 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 EMILIN3Q9NT22 766 aa16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 DBNLQ9UJU6 430 aaKnown RBP16.9■□□□□ 0.3
SEMA3F-208ENST00000470737 SYN1P17600 705 aa16.89■□□□□ 0.29
SEMA3F-208ENST00000470737 CACNB2Q08289 660 aaPredicted RBP16.89■□□□□ 0.29
SEMA3F-208ENST00000470737 MAP3K12Q12852 859 aa16.89■□□□□ 0.29
SEMA3F-208ENST00000470737 RAB3GAP1Q15042 981 aa16.89■□□□□ 0.29
SEMA3F-208ENST00000470737 Q3C1V9 767 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms