RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 TMEM238LA0A1B0GVL6 79 aa4.58□□□□□ -1.68
UBXN4-206ENST00000470687 TCAF2A6NFQ2 919 aa4.58□□□□□ -1.68
UBXN4-206ENST00000470687 GNAT3A8MTJ3 354 aa4.58□□□□□ -1.68
UBXN4-206ENST00000470687 CPNE3O75131 537 aaKnown RBP4.58□□□□□ -1.68
UBXN4-206ENST00000470687 GLDCP23378 1020 aa4.58□□□□□ -1.68
UBXN4-206ENST00000470687 DAB2P98082 770 aa4.58□□□□□ -1.68
UBXN4-206ENST00000470687 NXPE4Q6UWF7 544 aa4.58□□□□□ -1.68
UBXN4-206ENST00000470687 STK35Q8TDR2 534 aa4.58□□□□□ -1.68
UBXN4-206ENST00000470687 KCNB2Q92953 911 aa4.58□□□□□ -1.68
UBXN4-206ENST00000470687 DNAJC25Q9H1X3 360 aa4.58□□□□□ -1.68
UBXN4-206ENST00000470687 EPB41L4BQ9H329 900 aa4.58□□□□□ -1.68
UBXN4-206ENST00000470687 DCP1AQ9NPI6 582 aaPredicted RBP4.58□□□□□ -1.68
UBXN4-206ENST00000470687 PARP2Q9UGN5 583 aa4.58□□□□□ -1.68
UBXN4-206ENST00000470687 SCRIBQ14160 1630 aa4.57□□□□□ -1.68
UBXN4-206ENST00000470687 ETV2O00321 342 aaPredicted RBP4.57□□□□□ -1.68
UBXN4-206ENST00000470687 EOMESO95936 686 aa4.57□□□□□ -1.68
UBXN4-206ENST00000470687 LDHBP07195 334 aaKnown RBP4.57□□□□□ -1.68
UBXN4-206ENST00000470687 NTF4P34130 210 aa4.57□□□□□ -1.68
UBXN4-206ENST00000470687 GIPC2Q8TF65 315 aa4.57□□□□□ -1.68
UBXN4-206ENST00000470687 RELTQ969Z4 430 aa4.57□□□□□ -1.68
UBXN4-206ENST00000470687 ATP13A1Q9HD20 1204 aa4.57□□□□□ -1.68
UBXN4-206ENST00000470687 SEMA3GQ9NS98 782 aa4.57□□□□□ -1.68
UBXN4-206ENST00000470687 SMG5Q9UPR3 1016 aaKnown RBP4.57□□□□□ -1.68
UBXN4-206ENST00000470687 NUAK1O60285 661 aa4.56□□□□□ -1.68
UBXN4-206ENST00000470687 NEFLP07196 543 aa4.56□□□□□ -1.68
UBXN4-206ENST00000470687 LINC00310P59036 64 aa4.56□□□□□ -1.68
UBXN4-206ENST00000470687 PDE3BQ13370 1112 aa4.56□□□□□ -1.68
UBXN4-206ENST00000470687 MEI1Q5TIA1 1274 aa4.56□□□□□ -1.68
UBXN4-206ENST00000470687 MPRIPQ6WCQ1 1025 aa4.56□□□□□ -1.68
UBXN4-206ENST00000470687 TMC4Q7Z404 712 aa4.56□□□□□ -1.68
UBXN4-206ENST00000470687 UBE3DQ7Z6J8 389 aa4.56□□□□□ -1.68
UBXN4-206ENST00000470687 HSPA12BQ96MM6 686 aa4.56□□□□□ -1.68
UBXN4-206ENST00000470687 BCO2Q9BYV7 579 aa4.56□□□□□ -1.68
UBXN4-206ENST00000470687 FOXQ1Q9C009 403 aa4.56□□□□□ -1.68
UBXN4-206ENST00000470687 PRDM5Q9NQX1 630 aaPredicted RBP4.56□□□□□ -1.68
UBXN4-206ENST00000470687 MAPK8IP1Q9UQF2 711 aa4.56□□□□□ -1.68
UBXN4-206ENST00000470687 PRPF40AO75400 957 aaKnown RBP4.55□□□□□ -1.68
UBXN4-206ENST00000470687 PAGE1O75459 146 aa4.55□□□□□ -1.68
UBXN4-206ENST00000470687 PPP2R3AQ06190 1150 aa4.55□□□□□ -1.68
UBXN4-206ENST00000470687 EAPPQ56P03 285 aaPredicted RBP4.55□□□□□ -1.68
UBXN4-206ENST00000470687 PPM1JQ5JR12 505 aa4.55□□□□□ -1.68
UBXN4-206ENST00000470687 SULF2Q8IWU5 870 aa4.55□□□□□ -1.68
UBXN4-206ENST00000470687 ZSCAN29Q8IWY8 852 aaPredicted RBP4.55□□□□□ -1.68
UBXN4-206ENST00000470687 GPBAR1Q8TDU6 330 aa4.55□□□□□ -1.68
UBXN4-206ENST00000470687 TMEM39AQ9NV64 488 aa4.55□□□□□ -1.68
UBXN4-206ENST00000470687 GPN3Q9UHW5 284 aaPredicted RBP4.55□□□□□ -1.68
UBXN4-206ENST00000470687 TRAK1Q9UPV9 953 aa4.55□□□□□ -1.68
UBXN4-206ENST00000470687 GADD45BO75293 160 aaPredicted RBP4.54□□□□□ -1.68
UBXN4-206ENST00000470687 MAP1SQ66K74 1059 aaPredicted RBP4.54□□□□□ -1.68
UBXN4-206ENST00000470687 METTL16Q86W50 562 aaKnown RBP4.54□□□□□ -1.68
UBXN4-206ENST00000470687 TMC1Q8TDI8 760 aa4.54□□□□□ -1.68
UBXN4-206ENST00000470687 CCDC120Q96HB5 630 aa4.54□□□□□ -1.68
UBXN4-206ENST00000470687 ALPK1Q96QP1 1244 aa4.54□□□□□ -1.68
UBXN4-206ENST00000470687 SLC26A8Q96RN1 970 aa4.54□□□□□ -1.68
UBXN4-206ENST00000470687 BCL2L13Q9BXK5 485 aa4.54□□□□□ -1.68
UBXN4-206ENST00000470687 PARD6AQ9NPB6 346 aa4.54□□□□□ -1.68
UBXN4-206ENST00000470687 A0A0G2JLL6 359 aaPredicted RBP4.53□□□□□ -1.68
UBXN4-206ENST00000470687 PRR33A8MZF0 331 aa4.53□□□□□ -1.68
UBXN4-206ENST00000470687 SRFP11831 508 aa4.53□□□□□ -1.68
UBXN4-206ENST00000470687 ARNTP27540 789 aa4.53□□□□□ -1.68
UBXN4-206ENST00000470687 GNA15P30679 374 aa4.53□□□□□ -1.68
UBXN4-206ENST00000470687 RING1Q06587 406 aa4.53□□□□□ -1.68
UBXN4-206ENST00000470687 ZNF252P-AS1Q0IIN9 211 aa4.53□□□□□ -1.68
UBXN4-206ENST00000470687 CDKAL1Q5VV42 579 aa4.53□□□□□ -1.68
UBXN4-206ENST00000470687 C22orf34Q6ZV56 151 aa4.53□□□□□ -1.68
UBXN4-206ENST00000470687 ABHD4Q8TB40 342 aa4.53□□□□□ -1.68
UBXN4-206ENST00000470687 BACH2Q9BYV9 841 aa4.53□□□□□ -1.68
UBXN4-206ENST00000470687 IRF2BPLQ9H1B7 796 aa4.53□□□□□ -1.68
UBXN4-206ENST00000470687 CACNA2D2Q9NY47 1150 aa4.53□□□□□ -1.68
UBXN4-206ENST00000470687 AK5Q9Y6K8 562 aa4.53□□□□□ -1.68
UBXN4-206ENST00000470687 FAM155AB1AL88 458 aaPredicted RBP4.52□□□□□ -1.69
UBXN4-206ENST00000470687 H3BS24 57 aa4.52□□□□□ -1.69
UBXN4-206ENST00000470687 ENC1O14682 589 aa4.52□□□□□ -1.69
UBXN4-206ENST00000470687 FOXD2O60548 495 aaPredicted RBP4.52□□□□□ -1.69
UBXN4-206ENST00000470687 RAD51AP2Q09MP3 1159 aa4.52□□□□□ -1.69
UBXN4-206ENST00000470687 DTHD1Q6ZMT9 781 aa4.52□□□□□ -1.69
UBXN4-206ENST00000470687 ARMCX6Q7L4S7 300 aa4.52□□□□□ -1.69
UBXN4-206ENST00000470687 MFSD4AQ8N468 514 aa4.52□□□□□ -1.69
UBXN4-206ENST00000470687 KCNN1Q92952 543 aa4.52□□□□□ -1.69
UBXN4-206ENST00000470687 ACSBG1Q96GR2 724 aa4.52□□□□□ -1.69
UBXN4-206ENST00000470687 C12orf49Q9H741 205 aa4.52□□□□□ -1.69
UBXN4-206ENST00000470687 ST14Q9Y5Y6 855 aa4.52□□□□□ -1.69
UBXN4-206ENST00000470687 CSADQ9Y600 493 aa4.52□□□□□ -1.69
UBXN4-206ENST00000470687 USP31Q70CQ4 1352 aa4.52□□□□□ -1.69
UBXN4-206ENST00000470687 NCAPD3P42695 1498 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 FANCGO15287 622 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 FBXO24O75426 580 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 SLITRK5O94991 958 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 RAC2P15153 192 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 ERCC3P19447 782 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 BMP6P22004 513 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 GARTP22102 1010 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 FCGRTP55899 365 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 PTPN11Q06124 597 aaPredicted RBP4.51□□□□□ -1.69
UBXN4-206ENST00000470687 ZBTB37Q5TC79 503 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 DBX2Q6ZNG2 339 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 TTC6Q86TZ1 520 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 FBF1Q8TES7 1133 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 ANKRD24Q8TF21 1146 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 MRRFQ96E11 262 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms