RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 SF3A1Q15459 793 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-206ENST00000470588 IFIT1BQ5T764 474 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-206ENST00000470588 ANO1Q5XXA6 986 aa19.62■□□□□ 0.73
SMARCD3-206ENST00000470588 NUP133Q8WUM0 1156 aa19.62■□□□□ 0.73
SMARCD3-206ENST00000470588 MKRN1Q9UHC7 482 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-206ENST00000470588 SPTLC2O15270 562 aa19.62■□□□□ 0.73
SMARCD3-206ENST00000470588 USP5P45974 858 aa19.62■□□□□ 0.73
SMARCD3-206ENST00000470588 GNL2Q13823 731 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-206ENST00000470588 GRIPAP1Q4V328 841 aa19.62■□□□□ 0.73
SMARCD3-206ENST00000470588 ENGASEQ8NFI3 743 aa19.62■□□□□ 0.73
SMARCD3-206ENST00000470588 RBM28Q9NW13 759 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-206ENST00000470588 KIF13BQ9NQT8 1826 aa19.61■□□□□ 0.73
SMARCD3-206ENST00000470588 FAM160A1Q05DH4 1040 aa19.61■□□□□ 0.73
SMARCD3-206ENST00000470588 TYRO3Q06418 890 aa19.61■□□□□ 0.73
SMARCD3-206ENST00000470588 SAFBQ15424 915 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMARCD3-206ENST00000470588 C12orf60Q5U649 245 aa19.61■□□□□ 0.73
SMARCD3-206ENST00000470588 SUPT20HQ8NEM7 779 aa19.61■□□□□ 0.73
SMARCD3-206ENST00000470588 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMARCD3-206ENST00000470588 RTN4Q9NQC3 1192 aaKnown RBP19.61■□□□□ 0.73
SMARCD3-206ENST00000470588 MCM9Q9NXL9 1143 aa19.61■□□□□ 0.73
SMARCD3-206ENST00000470588 FAM205AQ6ZU69 1335 aa19.61■□□□□ 0.73
SMARCD3-206ENST00000470588 ESPNB1AK53 854 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 PRDM1O75626 825 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 DDAH1O94760 285 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 SLC39A14Q15043 492 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 SASS6Q6UVJ0 657 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 OLFM4Q6UX06 510 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 FSIP1Q8NA03 581 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 MRPS27Q92552 414 aaKnown RBP19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 FAM163AQ96GL9 167 aaPredicted RBP19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 RNF26Q9BY78 433 aaPredicted RBP19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 RRAGDQ9NQL2 400 aaPredicted RBP19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 MROH7-TTC4A0A0A0MT08 1334 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 CYP2D6P10635 497 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 SNW1Q13573 536 aaKnown RBP19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 MFSD14BQ5SR56 506 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 AMOTL1Q8IY63 956 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 SH3RF3Q8TEJ3 882 aaPredicted RBP19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 FBXW7Q969H0 707 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 MTFR1LQ9H019 292 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 GOLPH3LQ9H4A5 285 aa19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 ZNF219Q9P2Y4 722 aaPredicted RBP19.6■□□□□ 0.73
SMARCD3-206ENST00000470588 MYH2Q9UKX2 1941 aa19.59■□□□□ 0.73
SMARCD3-206ENST00000470588 USP17L8P0C7I0 530 aa19.59■□□□□ 0.73
SMARCD3-206ENST00000470588 AKAP17AQ02040 695 aaKnown RBP19.59■□□□□ 0.73
SMARCD3-206ENST00000470588 GRIK5Q16478 980 aa19.59■□□□□ 0.73
SMARCD3-206ENST00000470588 CCDC178Q5BJE1 867 aa19.59■□□□□ 0.73
SMARCD3-206ENST00000470588 CKAP2LQ8IYA6 745 aa19.59■□□□□ 0.73
SMARCD3-206ENST00000470588 TTLL6Q8N841 843 aa19.59■□□□□ 0.73
SMARCD3-206ENST00000470588 SUGT1Q9Y2Z0 365 aa19.59■□□□□ 0.73
SMARCD3-206ENST00000470588 MRVI1Q9Y6F6 885 aa19.59■□□□□ 0.73
SMARCD3-206ENST00000470588 GPR75-ASB3A0A0A6YYF3 556 aa19.58■□□□□ 0.73
SMARCD3-206ENST00000470588 PRPF3O43395 683 aaKnown RBP19.58■□□□□ 0.73
SMARCD3-206ENST00000470588 KINO60870 393 aaKnown RBP19.58■□□□□ 0.73
SMARCD3-206ENST00000470588 CAVIN2O95810 425 aa19.58■□□□□ 0.73
SMARCD3-206ENST00000470588 MMP1P03956 469 aa19.58■□□□□ 0.73
SMARCD3-206ENST00000470588 PLCG2P16885 1265 aa19.58■□□□□ 0.73
SMARCD3-206ENST00000470588 GUCY1A2P33402 732 aa19.58■□□□□ 0.73
SMARCD3-206ENST00000470588 FOXP1Q9H334 677 aaPredicted RBP19.58■□□□□ 0.73
SMARCD3-206ENST00000470588 PPP6R2O75170 966 aa19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 ZBTB7AO95365 584 aa19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 GTF2IP78347 998 aa19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 TROAPQ12815 778 aa19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 DIXDC1Q155Q3 683 aa19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 JMYQ8N9B5 988 aa19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 FAM200AQ8TCP9 573 aa19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 RTFDC1Q9BY42 306 aaPredicted RBP19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 XBP1P17861 261 aa19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 CMA1P23946 247 aa19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 PODNQ7Z5L7 613 aa19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 FMR1NBQ8N0W7 255 aaPredicted RBP19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 ANKS1AQ92625 1134 aa19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 CCDC39Q9UFE4 941 aa19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 LAMB1P07942 1786 aa19.57■□□□□ 0.72
SMARCD3-206ENST00000470588 TSPY2A6NKD2 308 aa19.56■□□□□ 0.72
SMARCD3-206ENST00000470588 FUT2Q10981 343 aa19.56■□□□□ 0.72
SMARCD3-206ENST00000470588 DOK7Q18PE1 504 aa19.56■□□□□ 0.72
SMARCD3-206ENST00000470588 CCDC93Q567U6 631 aa19.56■□□□□ 0.72
SMARCD3-206ENST00000470588 FAM47AQ5JRC9 791 aa19.56■□□□□ 0.72
SMARCD3-206ENST00000470588 NOSTRINQ8IVI9 506 aa19.56■□□□□ 0.72
SMARCD3-206ENST00000470588 CCDC82Q8N4S0 544 aa19.56■□□□□ 0.72
SMARCD3-206ENST00000470588 TGFBRAP1Q8WUH2 860 aa19.56■□□□□ 0.72
SMARCD3-206ENST00000470588 UBE2Q2LH0YL09 131 aa19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 BTDP43251 543 aa19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 EVX2Q03828 476 aa19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 AXDND1Q5T1B0 1012 aaPredicted RBP19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 ZSCAN30Q86W11 494 aa19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 DGKHQ86XP1 1220 aa19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 MAP3K14Q99558 947 aa19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 ROBO3Q96MS0 1386 aa19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 TGFB2P61812 414 aa19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 PTPAQ15257 358 aa19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 SOGA3Q5TF21 947 aa19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 DIS3L2Q8IYB7 885 aaKnown RBP19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 RTKN2Q8IZC4 609 aa19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 CMTR1Q8N1G2 835 aaKnown RBP19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 C7orf43Q8WVR3 580 aa19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 TCP11L1Q9NUJ3 509 aa19.55■□□□□ 0.72
SMARCD3-206ENST00000470588 ATF5Q9Y2D1 282 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms