RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 LPIN2Q92539 896 aa11.04□□□□□ -0.64
XRN1-208ENST00000470537 ZHX2Q9Y6X8 837 aa11.04□□□□□ -0.64
XRN1-208ENST00000470537 UTYO14607 1347 aa11.04□□□□□ -0.64
XRN1-208ENST00000470537 AK9Q5TCS8 1911 aa11.03□□□□□ -0.64
XRN1-208ENST00000470537 LDHBP07195 334 aaKnown RBP11.03□□□□□ -0.64
XRN1-208ENST00000470537 NBPF7P0C2Y1 421 aaPredicted RBP11.03□□□□□ -0.64
XRN1-208ENST00000470537 CTGFP29279 349 aa11.03□□□□□ -0.64
XRN1-208ENST00000470537 BMP8BP34820 402 aa11.03□□□□□ -0.64
XRN1-208ENST00000470537 FLT3LGP49771 235 aa11.03□□□□□ -0.64
XRN1-208ENST00000470537 GRIK5Q16478 980 aa11.03□□□□□ -0.64
XRN1-208ENST00000470537 SCYL3Q8IZE3 742 aa11.03□□□□□ -0.64
XRN1-208ENST00000470537 ZNF516Q92618 1163 aa11.03□□□□□ -0.64
XRN1-208ENST00000470537 SUCLG2Q96I99 432 aa11.03□□□□□ -0.64
XRN1-208ENST00000470537 DEFB118Q96PH6 123 aa11.03□□□□□ -0.64
XRN1-208ENST00000470537 UNC93B1Q9H1C4 597 aa11.03□□□□□ -0.64
XRN1-208ENST00000470537 BICC1Q9H694 974 aaKnown RBP11.03□□□□□ -0.64
XRN1-208ENST00000470537 USP40Q9NVE5 1235 aa11.03□□□□□ -0.64
XRN1-208ENST00000470537 HDAC5Q9UQL6 1122 aa11.03□□□□□ -0.64
XRN1-208ENST00000470537 LRRFIP2Q9Y608 721 aaKnown RBP11.03□□□□□ -0.64
XRN1-208ENST00000470537 ADGRA2Q96PE1 1338 aa11.03□□□□□ -0.64
XRN1-208ENST00000470537 COL6A3P12111 3177 aa11.02□□□□□ -0.64
XRN1-208ENST00000470537 A0A0G2JLL6 359 aaPredicted RBP11.02□□□□□ -0.65
XRN1-208ENST00000470537 SEMA3EO15041 775 aa11.02□□□□□ -0.65
XRN1-208ENST00000470537 ENTPD3O75355 529 aa11.02□□□□□ -0.65
XRN1-208ENST00000470537 INHAP05111 366 aa11.02□□□□□ -0.65
XRN1-208ENST00000470537 CYP2C8P10632 490 aa11.02□□□□□ -0.65
XRN1-208ENST00000470537 PABPC4Q13310 644 aaKnown RBP eCLIP11.02□□□□□ -0.65
XRN1-208ENST00000470537 LRRC24Q50LG9 513 aa11.02□□□□□ -0.65
XRN1-208ENST00000470537 CDC42EP5Q6NZY7 148 aa11.02□□□□□ -0.65
XRN1-208ENST00000470537 PRRT2Q7Z6L0 340 aaPredicted RBP11.02□□□□□ -0.65
XRN1-208ENST00000470537 ZSCAN29Q8IWY8 852 aaPredicted RBP11.02□□□□□ -0.65
XRN1-208ENST00000470537 VGLL2Q8N8G2 317 aa11.02□□□□□ -0.65
XRN1-208ENST00000470537 RTN4Q9NQC3 1192 aaKnown RBP11.02□□□□□ -0.65
XRN1-208ENST00000470537 CTNND1O60716 968 aaKnown RBP11.01□□□□□ -0.65
XRN1-208ENST00000470537 PTPRAP18433 802 aa11.01□□□□□ -0.65
XRN1-208ENST00000470537 MOGSQ13724 837 aa11.01□□□□□ -0.65
XRN1-208ENST00000470537 GPAT2Q6NUI2 795 aa11.01□□□□□ -0.65
XRN1-208ENST00000470537 TRAF7Q6Q0C0 670 aa11.01□□□□□ -0.65
XRN1-208ENST00000470537 GADL1Q6ZQY3 521 aa11.01□□□□□ -0.65
XRN1-208ENST00000470537 KAZALD1Q96I82 304 aa11.01□□□□□ -0.65
XRN1-208ENST00000470537 TBC1D2Q9BYX2 928 aa11.01□□□□□ -0.65
XRN1-208ENST00000470537 PAK6Q9NQU5 681 aaPredicted RBP11.01□□□□□ -0.65
XRN1-208ENST00000470537 STAP2Q9UGK3 403 aa11.01□□□□□ -0.65
XRN1-208ENST00000470537 DENND2AQ9ULE3 1009 aa11.01□□□□□ -0.65
XRN1-208ENST00000470537 GABRQQ9UN88 632 aa11.01□□□□□ -0.65
XRN1-208ENST00000470537 DAGLAQ9Y4D2 1042 aa11.01□□□□□ -0.65
XRN1-208ENST00000470537 AFG3L2Q9Y4W6 797 aa11.01□□□□□ -0.65
XRN1-208ENST00000470537 FGFR2P21802 821 aa11□□□□□ -0.65
XRN1-208ENST00000470537 GCLCP48506 637 aaPredicted RBP11□□□□□ -0.65
XRN1-208ENST00000470537 SPTY2D1Q68D10 685 aaPredicted RBP11□□□□□ -0.65
XRN1-208ENST00000470537 PAWRQ96IZ0 340 aaKnown RBP11□□□□□ -0.65
XRN1-208ENST00000470537 IDI2Q9BXS1 227 aa11□□□□□ -0.65
XRN1-208ENST00000470537 HMX1Q9NP08 348 aaPredicted RBP11□□□□□ -0.65
XRN1-208ENST00000470537 EIF4ENIF1Q9NRA8 985 aaKnown RBP11□□□□□ -0.65
XRN1-208ENST00000470537 CEP126Q9P2H0 1117 aa11□□□□□ -0.65
XRN1-208ENST00000470537 SALL2Q9Y467 1007 aaPredicted RBP11□□□□□ -0.65
XRN1-208ENST00000470537 V9GY48 417 aaPredicted RBP11□□□□□ -0.65
XRN1-208ENST00000470537 PTPRCP08575 1304 aa11□□□□□ -0.65
XRN1-208ENST00000470537 PHF20L1A8MW92 1017 aa10.99□□□□□ -0.65
XRN1-208ENST00000470537 EYA2O00167 538 aa10.99□□□□□ -0.65
XRN1-208ENST00000470537 LCE2BO14633 110 aa10.99□□□□□ -0.65
XRN1-208ENST00000470537 ELNP15502 786 aa10.99□□□□□ -0.65
XRN1-208ENST00000470537 MAP3K10Q02779 954 aa10.99□□□□□ -0.65
XRN1-208ENST00000470537 NFIAQ12857 509 aa10.99□□□□□ -0.65
XRN1-208ENST00000470537 FAM110CQ1W6H9 321 aa10.99□□□□□ -0.65
XRN1-208ENST00000470537 SWT1Q5T5J6 900 aaKnown RBP10.99□□□□□ -0.65
XRN1-208ENST00000470537 PADI6Q6TGC4 694 aa10.99□□□□□ -0.65
XRN1-208ENST00000470537 AGTPBP1Q9UPW5 1226 aa10.99□□□□□ -0.65
XRN1-208ENST00000470537 RPTORQ8N122 1335 aa10.99□□□□□ -0.65
XRN1-208ENST00000470537 SALL1Q9NSC2 1324 aa10.99□□□□□ -0.65
XRN1-208ENST00000470537 NRG2O14511 850 aaPredicted RBP10.98□□□□□ -0.65
XRN1-208ENST00000470537 MAP4K4O95819 1239 aaPredicted RBP10.98□□□□□ -0.65
XRN1-208ENST00000470537 HMGCRP04035 888 aa10.98□□□□□ -0.65
XRN1-208ENST00000470537 DIXDC1Q155Q3 683 aa10.98□□□□□ -0.65
XRN1-208ENST00000470537 LRIT3Q3SXY7 679 aa10.98□□□□□ -0.65
XRN1-208ENST00000470537 DZIP1Q86YF9 867 aaKnown RBP10.98□□□□□ -0.65
XRN1-208ENST00000470537 DEFB123Q8N688 67 aa10.98□□□□□ -0.65
XRN1-208ENST00000470537 ANKRD13CQ8N6S4 541 aa10.98□□□□□ -0.65
XRN1-208ENST00000470537 PROCA1Q8NCQ7 364 aaPredicted RBP10.98□□□□□ -0.65
XRN1-208ENST00000470537 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.98□□□□□ -0.65
XRN1-208ENST00000470537 MRS2Q9HD23 443 aa10.98□□□□□ -0.65
XRN1-208ENST00000470537 STXBP5LQ9Y2K9 1186 aa10.98□□□□□ -0.65
XRN1-208ENST00000470537 ZSWIM8A7E2V4 1837 aa10.98□□□□□ -0.65
XRN1-208ENST00000470537 MGAMO43451 1857 aa10.98□□□□□ -0.65
XRN1-208ENST00000470537 TRIM75PA6NK02 468 aa10.97□□□□□ -0.65
XRN1-208ENST00000470537 PRDX5P30044 214 aa10.97□□□□□ -0.65
XRN1-208ENST00000470537 SLC4A3P48751 1232 aa10.97□□□□□ -0.65
XRN1-208ENST00000470537 RGS3P49796 1198 aa10.97□□□□□ -0.65
XRN1-208ENST00000470537 COPS2P61201 443 aa10.97□□□□□ -0.65
XRN1-208ENST00000470537 ATP2B3Q16720 1220 aa10.97□□□□□ -0.65
XRN1-208ENST00000470537 TRMT44Q8IYL2 757 aaKnown RBP10.97□□□□□ -0.65
XRN1-208ENST00000470537 ANKRD44Q8N8A2 993 aa10.97□□□□□ -0.65
XRN1-208ENST00000470537 TTC13Q8NBP0 860 aa10.97□□□□□ -0.65
XRN1-208ENST00000470537 GDF15Q99988 308 aa10.97□□□□□ -0.65
XRN1-208ENST00000470537 CIAO1O76071 339 aa10.96□□□□□ -0.65
XRN1-208ENST00000470537 CCAR1Q8IX12 1150 aaKnown RBP10.96□□□□□ -0.65
XRN1-208ENST00000470537 C7orf61Q8IZ16 206 aa10.96□□□□□ -0.65
XRN1-208ENST00000470537 TDHQ8IZJ6 230 aa10.96□□□□□ -0.65
XRN1-208ENST00000470537 KLHDC4Q8TBB5 520 aa10.96□□□□□ -0.65
XRN1-208ENST00000470537 USP44Q9H0E7 712 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms