RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 TSPY8P0CW00 308 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 CRKP46108 304 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 GNAQP50148 359 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 AKAP17AQ02040 695 aaKnown RBP12.78□□□□□ -0.36
SND1-208ENST00000470463 DALRD3Q5D0E6 543 aaKnown RBP12.78□□□□□ -0.36
SND1-208ENST00000470463 OLFM4Q6UX06 510 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 MAPKAPK5Q8IW41 473 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 CERS5Q8N5B7 392 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 FBXO18Q8NFZ0 1043 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 CTCFLQ8NI51 663 aaPredicted RBP12.78□□□□□ -0.36
SND1-208ENST00000470463 RNF26Q9BY78 433 aaPredicted RBP12.78□□□□□ -0.36
SND1-208ENST00000470463 GPHNQ9NQX3 736 aaPredicted RBP12.78□□□□□ -0.36
SND1-208ENST00000470463 USP40Q9NVE5 1235 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 HDAC9Q9UKV0 1011 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 TACC3Q9Y6A5 838 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 CYP2D7A0A087X1C5 515 aa12.77□□□□□ -0.37
SND1-208ENST00000470463 FDPSP14324 419 aaKnown RBP12.77□□□□□ -0.37
SND1-208ENST00000470463 KCNA3P22001 575 aa12.77□□□□□ -0.37
SND1-208ENST00000470463 RESTQ13127 1097 aa12.77□□□□□ -0.37
SND1-208ENST00000470463 FAM177A1Q8N128 213 aaPredicted RBP12.77□□□□□ -0.37
SND1-208ENST00000470463 LARGE2Q8N3Y3 721 aa12.77□□□□□ -0.37
SND1-208ENST00000470463 EHD4Q9H223 541 aa12.77□□□□□ -0.37
SND1-208ENST00000470463 KAT14Q9H8E8 782 aa12.77□□□□□ -0.37
SND1-208ENST00000470463 INCENPQ9NQS7 918 aa12.77□□□□□ -0.37
SND1-208ENST00000470463 CEP350Q5VT06 3117 aa12.76□□□□□ -0.37
SND1-208ENST00000470463 LETM1O95202 739 aaPredicted RBP12.76□□□□□ -0.37
SND1-208ENST00000470463 ADD1P35611 737 aaKnown RBP12.76□□□□□ -0.37
SND1-208ENST00000470463 CDK8P49336 464 aa12.76□□□□□ -0.37
SND1-208ENST00000470463 TFAP4Q01664 338 aa12.76□□□□□ -0.37
SND1-208ENST00000470463 DNM1Q05193 864 aaKnown RBP12.76□□□□□ -0.37
SND1-208ENST00000470463 SAFBQ15424 915 aaKnown RBP eCLIP12.76□□□□□ -0.37
SND1-208ENST00000470463 NTRK3Q16288 839 aa12.76□□□□□ -0.37
SND1-208ENST00000470463 USP48Q86UV5 1035 aa12.76□□□□□ -0.37
SND1-208ENST00000470463 NIM1KQ8IY84 436 aa12.76□□□□□ -0.37
SND1-208ENST00000470463 OGFOD1Q8N543 542 aa12.76□□□□□ -0.37
SND1-208ENST00000470463 LZTS2Q9BRK4 669 aa12.76□□□□□ -0.37
SND1-208ENST00000470463 ZKSCAN3Q9BRR0 538 aa12.76□□□□□ -0.37
SND1-208ENST00000470463 ALG1Q9BT22 464 aa12.76□□□□□ -0.37
SND1-208ENST00000470463 IDI2Q9BXS1 227 aa12.76□□□□□ -0.37
SND1-208ENST00000470463 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
SND1-208ENST00000470463 FOCADQ5VW36 1801 aa12.76□□□□□ -0.37
SND1-208ENST00000470463 GOLGA6L4A6NEF3 574 aa12.75□□□□□ -0.37
SND1-208ENST00000470463 F8W031 263 aaPredicted RBP12.75□□□□□ -0.37
SND1-208ENST00000470463 PRDM1O75626 825 aa12.75□□□□□ -0.37
SND1-208ENST00000470463 VIL1P09327 827 aaKnown RBP12.75□□□□□ -0.37
SND1-208ENST00000470463 CDC27P30260 824 aa12.75□□□□□ -0.37
SND1-208ENST00000470463 DDX60LQ5H9U9 1706 aaKnown RBP12.75□□□□□ -0.37
SND1-208ENST00000470463 L1TD1Q5T7N2 865 aaKnown RBP12.75□□□□□ -0.37
SND1-208ENST00000470463 APOBEC3HQ6NTF7 200 aaKnown RBP12.75□□□□□ -0.37
SND1-208ENST00000470463 STK11IPQ8N1F8 1099 aa12.75□□□□□ -0.37
SND1-208ENST00000470463 CRACR2BQ8N4Y2 399 aaPredicted RBP12.75□□□□□ -0.37
SND1-208ENST00000470463 AGBL3Q8NEM8 1001 aa12.75□□□□□ -0.37
SND1-208ENST00000470463 NEDD1Q8NHV4 660 aa12.75□□□□□ -0.37
SND1-208ENST00000470463 NUP133Q8WUM0 1156 aa12.75□□□□□ -0.37
SND1-208ENST00000470463 SPATA32Q96LK8 384 aa12.75□□□□□ -0.37
SND1-208ENST00000470463 CCDC17Q96LX7 622 aa12.75□□□□□ -0.37
SND1-208ENST00000470463 OSBPL5Q9H0X9 879 aaPredicted RBP12.75□□□□□ -0.37
SND1-208ENST00000470463 FAM217BQ9NTX9 383 aaPredicted RBP12.75□□□□□ -0.37
SND1-208ENST00000470463 TMOD2Q9NZR1 351 aa12.75□□□□□ -0.37
SND1-208ENST00000470463 ZNRF3Q9ULT6 936 aa12.75□□□□□ -0.37
SND1-208ENST00000470463 COL2A1P02458 1487 aaPredicted RBP12.74□□□□□ -0.37
SND1-208ENST00000470463 PLIN4Q96Q06 1357 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 LTBP3Q9NS15 1303 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 ENTPD3O75355 529 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 WDHD1O75717 1129 aaPredicted RBP12.74□□□□□ -0.37
SND1-208ENST00000470463 CYP2D6P10635 497 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 RASA1P20936 1047 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 SCNN1DP51172 638 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 PLCD1P51178 756 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 RBM5P52756 815 aaKnown RBP eCLIP12.74□□□□□ -0.37
SND1-208ENST00000470463 TROAPQ12815 778 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 GNL2Q13823 731 aaKnown RBP12.74□□□□□ -0.37
SND1-208ENST00000470463 CDC42EP5Q6NZY7 148 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 RSBN1LQ6PCB5 846 aaPredicted RBP12.74□□□□□ -0.37
SND1-208ENST00000470463 FERMT3Q86UX7 667 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 KIAA0825Q8IV33 1275 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 DNAJC5GQ8N7S2 189 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 JDP2Q8WYK2 163 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 SAP30BPQ9UHR5 308 aaKnown RBP12.74□□□□□ -0.37
SND1-208ENST00000470463 SERPINB13Q9UIV8 391 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 CNPY2Q9Y2B0 182 aa12.74□□□□□ -0.37
SND1-208ENST00000470463 MYH1P12882 1939 aa12.73□□□□□ -0.37
SND1-208ENST00000470463 PRPF3O43395 683 aaKnown RBP12.73□□□□□ -0.37
SND1-208ENST00000470463 FIBPO43427 364 aa12.73□□□□□ -0.37
SND1-208ENST00000470463 SMARCA1P28370 1054 aa12.73□□□□□ -0.37
SND1-208ENST00000470463 GABPAQ06546 454 aa12.73□□□□□ -0.37
SND1-208ENST00000470463 TNIP1Q15025 636 aa12.73□□□□□ -0.37
SND1-208ENST00000470463 FAM47AQ5JRC9 791 aa12.73□□□□□ -0.37
SND1-208ENST00000470463 FOXP4Q8IVH2 680 aaPredicted RBP12.73□□□□□ -0.37
SND1-208ENST00000470463 SLC26A6Q9BXS9 759 aa12.73□□□□□ -0.37
SND1-208ENST00000470463 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
SND1-208ENST00000470463 SENP2Q9HC62 589 aa12.73□□□□□ -0.37
SND1-208ENST00000470463 BRMS1Q9HCU9 246 aa12.73□□□□□ -0.37
SND1-208ENST00000470463 PI4KBQ9UBF8 816 aa12.73□□□□□ -0.37
SND1-208ENST00000470463 CDK5RAP2Q96SN8 1893 aa12.73□□□□□ -0.37
SND1-208ENST00000470463 PSME4Q14997 1843 aa12.73□□□□□ -0.37
SND1-208ENST00000470463 GOLGB1Q14789 3259 aaKnown RBP12.72□□□□□ -0.37
SND1-208ENST00000470463 TOP1P11387 765 aaKnown RBP12.72□□□□□ -0.37
SND1-208ENST00000470463 RXRAP19793 462 aa12.72□□□□□ -0.37
SND1-208ENST00000470463 NOVP48745 357 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms