RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ZNF280CQ8ND82 737 aa17.03■□□□□ 0.32
TOP3B-215ENST00000470338 APPBP2Q92624 585 aa17.03■□□□□ 0.32
TOP3B-215ENST00000470338 OSBP2Q969R2 916 aa17.03■□□□□ 0.32
TOP3B-215ENST00000470338 ABHD8Q96I13 439 aa17.03■□□□□ 0.32
TOP3B-215ENST00000470338 STRBPQ96SI9 672 aaKnown RBP17.03■□□□□ 0.32
TOP3B-215ENST00000470338 WDR18Q9BV38 432 aa17.03■□□□□ 0.32
TOP3B-215ENST00000470338 LNPKQ9C0E8 428 aa17.03■□□□□ 0.32
TOP3B-215ENST00000470338 TAOK2Q9UL54 1235 aa17.03■□□□□ 0.32
TOP3B-215ENST00000470338 GDF11O95390 407 aa17.02■□□□□ 0.32
TOP3B-215ENST00000470338 SP3Q02447 781 aa17.02■□□□□ 0.32
TOP3B-215ENST00000470338 SHROOM1Q2M3G4 852 aaPredicted RBP17.02■□□□□ 0.32
TOP3B-215ENST00000470338 AS3MTQ9HBK9 375 aa17.02■□□□□ 0.32
TOP3B-215ENST00000470338 ZBTB21Q9ULJ3 1066 aa17.02■□□□□ 0.32
TOP3B-215ENST00000470338 SLC45A1Q9Y2W3 748 aa17.02■□□□□ 0.32
TOP3B-215ENST00000470338 SLC4A4Q9Y6R1 1079 aa17.02■□□□□ 0.32
TOP3B-215ENST00000470338 SHMT1P34896 483 aa17.01■□□□□ 0.31
TOP3B-215ENST00000470338 EVX2Q03828 476 aa17.01■□□□□ 0.31
TOP3B-215ENST00000470338 PKN2Q16513 984 aaKnown RBP17.01■□□□□ 0.31
TOP3B-215ENST00000470338 SH3D19Q5HYK7 790 aa17.01■□□□□ 0.31
TOP3B-215ENST00000470338 GADL1Q6ZQY3 521 aa17.01■□□□□ 0.31
TOP3B-215ENST00000470338 ERO1AQ96HE7 468 aa17.01■□□□□ 0.31
TOP3B-215ENST00000470338 ADGRA2Q96PE1 1338 aa17■□□□□ 0.31
TOP3B-215ENST00000470338 CYP2D6P10635 497 aa17■□□□□ 0.31
TOP3B-215ENST00000470338 CERKLQ49MI3 558 aaPredicted RBP17■□□□□ 0.31
TOP3B-215ENST00000470338 C12orf60Q5U649 245 aa17■□□□□ 0.31
TOP3B-215ENST00000470338 C17orf99Q6UX52 265 aa17■□□□□ 0.31
TOP3B-215ENST00000470338 PROCA1Q8NCQ7 364 aaPredicted RBP17■□□□□ 0.31
TOP3B-215ENST00000470338 EVI5LQ96CN4 794 aa17■□□□□ 0.31
TOP3B-215ENST00000470338 FSD1Q9BTV5 496 aa17■□□□□ 0.31
TOP3B-215ENST00000470338 GSG1L2A8MUP6 293 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 USP17L12C9JPN9 530 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 USP17L21D6R901 530 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 GH2P01242 217 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 BACE1P56817 501 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 ZMYM1Q5SVZ6 1142 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 GIMAP6Q6P9H5 292 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 CTR9Q6PD62 1173 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 TICAM2Q86XR7 235 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 PLEKHM2Q8IWE5 1019 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 CD99L2Q8TCZ2 262 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 DDRGK1Q96HY6 314 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 OSBPL3Q9H4L5 887 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 SWAP70Q9UH65 585 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 AGTPBP1Q9UPW5 1226 aa16.99■□□□□ 0.31
TOP3B-215ENST00000470338 C19orf81C9J6K1 198 aa16.98■□□□□ 0.31
TOP3B-215ENST00000470338 M0R2C6 588 aa16.98■□□□□ 0.31
TOP3B-215ENST00000470338 GPAA1O43292 621 aa16.98■□□□□ 0.31
TOP3B-215ENST00000470338 GNAT2P19087 354 aa16.98■□□□□ 0.31
TOP3B-215ENST00000470338 HMGCS2P54868 508 aa16.98■□□□□ 0.31
TOP3B-215ENST00000470338 CAP1Q01518 475 aa16.98■□□□□ 0.31
TOP3B-215ENST00000470338 ABCB5Q2M3G0 1257 aa16.98■□□□□ 0.31
TOP3B-215ENST00000470338 OTOP1Q7RTM1 612 aa16.98■□□□□ 0.31
TOP3B-215ENST00000470338 PARK7Q99497 189 aaKnown RBP16.98■□□□□ 0.31
TOP3B-215ENST00000470338 MGAMO43451 1857 aa16.97■□□□□ 0.31
TOP3B-215ENST00000470338 CYP2D7A0A087X1C5 515 aa16.97■□□□□ 0.31
TOP3B-215ENST00000470338 USP17L10C9JJH3 530 aa16.97■□□□□ 0.31
TOP3B-215ENST00000470338 SMIM22K7EJ46 135 aa16.97■□□□□ 0.31
TOP3B-215ENST00000470338 CYP2C8P10632 490 aa16.97■□□□□ 0.31
TOP3B-215ENST00000470338 SBK1Q52WX2 424 aa16.97■□□□□ 0.31
TOP3B-215ENST00000470338 TREML2Q5T2D2 321 aa16.97■□□□□ 0.31
TOP3B-215ENST00000470338 AMOTL1Q8IY63 956 aa16.97■□□□□ 0.31
TOP3B-215ENST00000470338 DYNLL2Q96FJ2 89 aa16.97■□□□□ 0.31
TOP3B-215ENST00000470338 SEC62Q99442 399 aaKnown RBP16.97■□□□□ 0.31
TOP3B-215ENST00000470338 CABP5Q9NP86 173 aa16.97■□□□□ 0.31
TOP3B-215ENST00000470338 ZSWIM8A7E2V4 1837 aa16.97■□□□□ 0.31
TOP3B-215ENST00000470338 PATL2C9JE40 543 aaKnown RBP16.96■□□□□ 0.31
TOP3B-215ENST00000470338 CAPN15O75808 1086 aa16.96■□□□□ 0.31
TOP3B-215ENST00000470338 BCRP11274 1271 aa16.96■□□□□ 0.31
TOP3B-215ENST00000470338 GUCY1A2P33402 732 aa16.96■□□□□ 0.31
TOP3B-215ENST00000470338 MTMR2Q13614 643 aa16.96■□□□□ 0.31
TOP3B-215ENST00000470338 FBXO46Q6PJ61 603 aaPredicted RBP16.96■□□□□ 0.31
TOP3B-215ENST00000470338 C16orf86Q6ZW13 317 aa16.96■□□□□ 0.31
TOP3B-215ENST00000470338 SLC44A5Q8NCS7 719 aa16.96■□□□□ 0.31
TOP3B-215ENST00000470338 EFCC1Q9HA90 598 aa16.96■□□□□ 0.31
TOP3B-215ENST00000470338 ARPP21Q9UBL0 812 aaPredicted RBP16.96■□□□□ 0.31
TOP3B-215ENST00000470338 CPA4Q9UI42 421 aa16.96■□□□□ 0.31
TOP3B-215ENST00000470338 TRIM17Q9Y577 477 aa16.96■□□□□ 0.31
TOP3B-215ENST00000470338 CDK8P49336 464 aa16.95■□□□□ 0.3
TOP3B-215ENST00000470338 LACTBP83111 547 aaPredicted RBP16.95■□□□□ 0.3
TOP3B-215ENST00000470338 PABPC4Q13310 644 aaKnown RBP eCLIP16.95■□□□□ 0.3
TOP3B-215ENST00000470338 RAB3GAP1Q15042 981 aa16.95■□□□□ 0.3
TOP3B-215ENST00000470338 ARHGEF6Q15052 776 aa16.95■□□□□ 0.3
TOP3B-215ENST00000470338 EPB41L4AQ9HCS5 686 aaPredicted RBP16.95■□□□□ 0.3
TOP3B-215ENST00000470338 HTTP42858 3142 aa16.95■□□□□ 0.3
TOP3B-215ENST00000470338 HOXA7P31268 230 aaPredicted RBP16.94■□□□□ 0.3
TOP3B-215ENST00000470338 SEPT2Q15019 361 aa16.94■□□□□ 0.3
TOP3B-215ENST00000470338 USP17L2Q6R6M4 530 aa16.94■□□□□ 0.3
TOP3B-215ENST00000470338 IFNL3Q8IZI9 196 aa16.94■□□□□ 0.3
TOP3B-215ENST00000470338 CCDC17Q96LX7 622 aa16.94■□□□□ 0.3
TOP3B-215ENST00000470338 EMILIN3Q9NT22 766 aa16.94■□□□□ 0.3
TOP3B-215ENST00000470338 TMOD4Q9NZQ9 345 aa16.94■□□□□ 0.3
TOP3B-215ENST00000470338 PNMA3Q9UL41 463 aa16.94■□□□□ 0.3
TOP3B-215ENST00000470338 HPS5Q9UPZ3 1129 aa16.94■□□□□ 0.3
TOP3B-215ENST00000470338 PTPN22Q9Y2R2 807 aa16.94■□□□□ 0.3
TOP3B-215ENST00000470338 DOCK3Q8IZD9 2030 aa16.93■□□□□ 0.3
TOP3B-215ENST00000470338 KIF22Q14807 665 aa16.93■□□□□ 0.3
TOP3B-215ENST00000470338 TMEM179Q6ZVK1 233 aa16.93■□□□□ 0.3
TOP3B-215ENST00000470338 ACER1Q8TDN7 264 aa16.93■□□□□ 0.3
TOP3B-215ENST00000470338 C12orf42Q96LP6 360 aa16.93■□□□□ 0.3
TOP3B-215ENST00000470338 ARHGAP39Q9C0H5 1083 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms