RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 GPRC5AQ8NFJ5 357 aa14.22□□□□□ -0.13
COMMD2-202ENST00000469896 PRDM12Q9H4Q4 367 aa14.22□□□□□ -0.13
COMMD2-202ENST00000469896 CWC22Q9HCG8 908 aaKnown RBP14.22□□□□□ -0.13
COMMD2-202ENST00000469896 KBTBD13C9JR72 458 aa14.21□□□□□ -0.13
COMMD2-202ENST00000469896 CNGA1P29973 690 aa14.21□□□□□ -0.13
COMMD2-202ENST00000469896 ZEB1P37275 1124 aaPredicted RBP14.21□□□□□ -0.13
COMMD2-202ENST00000469896 IRX3P78415 501 aaPredicted RBP14.21□□□□□ -0.13
COMMD2-202ENST00000469896 CALD1Q05682 793 aaKnown RBP14.21□□□□□ -0.13
COMMD2-202ENST00000469896 CCL14Q16627 93 aa14.21□□□□□ -0.13
COMMD2-202ENST00000469896 TRIM60Q495X7 471 aa14.21□□□□□ -0.13
COMMD2-202ENST00000469896 TMEM92Q6UXU6 159 aa14.21□□□□□ -0.13
COMMD2-202ENST00000469896 ZNF594Q96JF6 807 aaPredicted RBP14.21□□□□□ -0.13
COMMD2-202ENST00000469896 TBC1D2Q9BYX2 928 aa14.21□□□□□ -0.13
COMMD2-202ENST00000469896 FAM198AQ9UFP1 575 aa14.21□□□□□ -0.13
COMMD2-202ENST00000469896 A0A1B0GUL6 1792 aa14.21□□□□□ -0.13
COMMD2-202ENST00000469896 ATRNL1Q5VV63 1379 aa14.21□□□□□ -0.14
COMMD2-202ENST00000469896 AK9Q5TCS8 1911 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 HMGCS2P54868 508 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 GNAI1P63096 354 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 FOXO4P98177 505 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 LMBR1LQ6UX01 489 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 CCDC146Q8IYE0 955 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 ZNF280CQ8ND82 737 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 LINS1Q8NG48 757 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 PCGF6Q9BYE7 350 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 USP40Q9NVE5 1235 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 IFT57Q9NWB7 429 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 DAGLAQ9Y4D2 1042 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 TACC3Q9Y6A5 838 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 STK24Q9Y6E0 443 aa14.2□□□□□ -0.14
COMMD2-202ENST00000469896 UTYO14607 1347 aa14.19□□□□□ -0.14
COMMD2-202ENST00000469896 TRIM43BA6NCK2 446 aa14.19□□□□□ -0.14
COMMD2-202ENST00000469896 FPGSQ05932 587 aa14.19□□□□□ -0.14
COMMD2-202ENST00000469896 TRIM26Q12899 539 aaPredicted RBP14.19□□□□□ -0.14
COMMD2-202ENST00000469896 SPP2Q13103 211 aa14.19□□□□□ -0.14
COMMD2-202ENST00000469896 SNX17Q15036 470 aa14.19□□□□□ -0.14
COMMD2-202ENST00000469896 CCDC129Q6ZRS4 1044 aa14.19□□□□□ -0.14
COMMD2-202ENST00000469896 USP6NLQ92738 828 aa14.19□□□□□ -0.14
COMMD2-202ENST00000469896 TRIM43Q96BQ3 446 aaPredicted RBP14.19□□□□□ -0.14
COMMD2-202ENST00000469896 XIRP2A4UGR9 3374 aa14.19□□□□□ -0.14
COMMD2-202ENST00000469896 MROH5Q6ZUA9 1318 aa14.18□□□□□ -0.14
COMMD2-202ENST00000469896 ENTPD3O75355 529 aa14.18□□□□□ -0.14
COMMD2-202ENST00000469896 GLRX3O76003 335 aaKnown RBP14.18□□□□□ -0.14
COMMD2-202ENST00000469896 ZNF853P0CG23 659 aa14.18□□□□□ -0.14
COMMD2-202ENST00000469896 RAG1P15918 1043 aa14.18□□□□□ -0.14
COMMD2-202ENST00000469896 MAP3K10Q02779 954 aa14.18□□□□□ -0.14
COMMD2-202ENST00000469896 MORN1Q5T089 497 aa14.18□□□□□ -0.14
COMMD2-202ENST00000469896 GJC2Q5T442 439 aaPredicted RBP14.18□□□□□ -0.14
COMMD2-202ENST00000469896 GPR142Q7Z601 462 aa14.18□□□□□ -0.14
COMMD2-202ENST00000469896 SH3RF1Q7Z6J0 888 aa14.18□□□□□ -0.14
COMMD2-202ENST00000469896 PLEKHH3Q7Z736 793 aa14.18□□□□□ -0.14
COMMD2-202ENST00000469896 C8orf58Q8NAV2 365 aa14.18□□□□□ -0.14
COMMD2-202ENST00000469896 WDR66Q8TBY9 1149 aa14.18□□□□□ -0.14
COMMD2-202ENST00000469896 RUNDC1Q96C34 613 aa14.18□□□□□ -0.14
COMMD2-202ENST00000469896 PTPRFP10586 1907 aa14.17□□□□□ -0.14
COMMD2-202ENST00000469896 RGS3P49796 1198 aa14.17□□□□□ -0.14
COMMD2-202ENST00000469896 EPHB4P54760 987 aa14.17□□□□□ -0.14
COMMD2-202ENST00000469896 C1orf53Q5VUE5 145 aa14.17□□□□□ -0.14
COMMD2-202ENST00000469896 CCDC174Q6PII3 467 aa14.17□□□□□ -0.14
COMMD2-202ENST00000469896 CCDC84Q86UT8 332 aaPredicted RBP14.17□□□□□ -0.14
COMMD2-202ENST00000469896 ZFPM1Q8IX07 1006 aa14.17□□□□□ -0.14
COMMD2-202ENST00000469896 MFRPQ9BY79 579 aa14.17□□□□□ -0.14
COMMD2-202ENST00000469896 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.17□□□□□ -0.14
COMMD2-202ENST00000469896 PLXNB2O15031 1838 aa14.16□□□□□ -0.14
COMMD2-202ENST00000469896 STK25O00506 426 aa14.16□□□□□ -0.14
COMMD2-202ENST00000469896 CLTBP09497 229 aa14.16□□□□□ -0.14
COMMD2-202ENST00000469896 MAP2K5Q13163 448 aa14.16□□□□□ -0.14
COMMD2-202ENST00000469896 ADGRE1Q14246 886 aa14.16□□□□□ -0.14
COMMD2-202ENST00000469896 DIXDC1Q155Q3 683 aa14.16□□□□□ -0.14
COMMD2-202ENST00000469896 GTF3C2Q8WUA4 911 aaPredicted RBP14.16□□□□□ -0.14
COMMD2-202ENST00000469896 DNAAF4Q8WXU2 420 aa14.16□□□□□ -0.14
COMMD2-202ENST00000469896 EDC3Q96F86 508 aaKnown RBP14.16□□□□□ -0.14
COMMD2-202ENST00000469896 SMIM22K7EJ46 135 aa14.15□□□□□ -0.14
COMMD2-202ENST00000469896 KCNQ1P51787 676 aa14.15□□□□□ -0.14
COMMD2-202ENST00000469896 HERVK_113P62684 666 aa14.15□□□□□ -0.14
COMMD2-202ENST00000469896 ATP2B2Q01814 1243 aa14.15□□□□□ -0.14
COMMD2-202ENST00000469896 TFF2Q03403 129 aa14.15□□□□□ -0.14
COMMD2-202ENST00000469896 TLE2Q04725 743 aa14.15□□□□□ -0.14
COMMD2-202ENST00000469896 SKIV2LQ15477 1246 aaKnown RBP14.15□□□□□ -0.14
COMMD2-202ENST00000469896 IDI2Q9BXS1 227 aa14.15□□□□□ -0.14
COMMD2-202ENST00000469896 PBX4Q9BYU1 374 aa14.15□□□□□ -0.14
COMMD2-202ENST00000469896 AS3MTQ9HBK9 375 aa14.15□□□□□ -0.14
COMMD2-202ENST00000469896 TMOD4Q9NZQ9 345 aa14.15□□□□□ -0.14
COMMD2-202ENST00000469896 DOCK1Q14185 1865 aa14.14□□□□□ -0.15
COMMD2-202ENST00000469896 FAM86C2PA6NEL3 165 aa14.14□□□□□ -0.15
COMMD2-202ENST00000469896 KIAA0355O15063 1070 aa14.14□□□□□ -0.15
COMMD2-202ENST00000469896 ERVK-9P63128 1117 aa14.14□□□□□ -0.15
COMMD2-202ENST00000469896 ERVK-24P63145 666 aa14.14□□□□□ -0.15
COMMD2-202ENST00000469896 FKBP5Q13451 457 aaPredicted RBP14.14□□□□□ -0.15
COMMD2-202ENST00000469896 RAB30Q15771 203 aa14.14□□□□□ -0.15
COMMD2-202ENST00000469896 SH3D19Q5HYK7 790 aa14.14□□□□□ -0.15
COMMD2-202ENST00000469896 HERVK_113Q902F9 699 aa14.14□□□□□ -0.15
COMMD2-202ENST00000469896 OSBPL5Q9H0X9 879 aaPredicted RBP14.14□□□□□ -0.15
COMMD2-202ENST00000469896 TXNRD2Q9NNW7 524 aa14.14□□□□□ -0.15
COMMD2-202ENST00000469896 MSRAQ9UJ68 235 aa14.14□□□□□ -0.15
COMMD2-202ENST00000469896 MYO9BQ13459 2157 aa14.14□□□□□ -0.15
COMMD2-202ENST00000469896 POTEB3A0JP26 581 aa14.13□□□□□ -0.15
COMMD2-202ENST00000469896 ERC2O15083 957 aa14.13□□□□□ -0.15
COMMD2-202ENST00000469896 ITGB8P26012 769 aa14.13□□□□□ -0.15
COMMD2-202ENST00000469896 HOXA7P31268 230 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms