RNA–Protein interactions for RNA: ENST00000469882.5

FXR1-208, Transcript of FMR1 autosomal homolog 1, human

TSL 3

Gene FXR1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-208	ENST00000469882	EHD4	Q9H223	541 aa		13.65	□□□□□ -0.22
FXR1-208	ENST00000469882	POTEF	A5A3E0	1075 aa		13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	OSBP	P22059	807 aa		13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	ADD2	P35612	726 aa		13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	PLCD1	P51178	756 aa		13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	SLC9C1	Q4G0N8	1177 aa		13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	SH3D19	Q5HYK7	790 aa		13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	TATDN1	Q6P1N9	297 aa		13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	SDR42E1	Q8WUS8	393 aa		13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	ZNF333	Q96JL9	665 aa		13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	WDR18	Q9BV38	432 aa		13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	AS3MT	Q9HBK9	375 aa		13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	SERPINB13	Q9UIV8	391 aa		13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.64	□□□□□ -0.23
FXR1-208	ENST00000469882	MBD4	O95243	580 aa		13.63	□□□□□ -0.23
FXR1-208	ENST00000469882	GNRH1	P01148	92 aa		13.63	□□□□□ -0.23
FXR1-208	ENST00000469882	GH2	P01242	217 aa		13.63	□□□□□ -0.23
FXR1-208	ENST00000469882	SHMT1	P34896	483 aa		13.63	□□□□□ -0.23
FXR1-208	ENST00000469882	SH3TC2	Q8TF17	1288 aa		13.63	□□□□□ -0.23
FXR1-208	ENST00000469882	CRBN	Q96SW2	442 aa		13.63	□□□□□ -0.23
FXR1-208	ENST00000469882	ARMT1	Q9H993	441 aa		13.63	□□□□□ -0.23
FXR1-208	ENST00000469882	ECHDC1	Q9NTX5	307 aa		13.63	□□□□□ -0.23
FXR1-208	ENST00000469882	SRRD	Q9UH36	339 aa		13.63	□□□□□ -0.23
FXR1-208	ENST00000469882	PRKAB2	O43741	272 aa		13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	FMNL1	O95466	1100 aa	Predicted RBP	13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	CYP2D6	P10635	497 aa		13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	BACE1	P56817	501 aa		13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	GABPA	Q06546	454 aa		13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	TTC6	Q86TZ1	520 aa		13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	ANKRD13C	Q8N6S4	541 aa		13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	GINM1	Q9NU53	330 aa		13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	MCM9	Q9NXL9	1143 aa		13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	PNMA3	Q9UL41	463 aa		13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	MYPN	Q86TC9	1320 aa		13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	KIAA0100	Q14667	2235 aa	Known RBP	13.62	□□□□□ -0.23
FXR1-208	ENST00000469882	MYH8	P13535	1937 aa		13.61	□□□□□ -0.23
FXR1-208	ENST00000469882	POLR3D	P05423	398 aa	Predicted RBP	13.61	□□□□□ -0.23
FXR1-208	ENST00000469882	PRMT2	P55345	433 aa		13.61	□□□□□ -0.23
FXR1-208	ENST00000469882	FCGRT	P55899	365 aa		13.61	□□□□□ -0.23
FXR1-208	ENST00000469882	PRKCZ	Q05513	592 aa		13.61	□□□□□ -0.23
FXR1-208	ENST00000469882	GABRQ	Q9UN88	632 aa		13.61	□□□□□ -0.23
FXR1-208	ENST00000469882	PDE4DIP	Q5VU43	2346 aa		13.61	□□□□□ -0.23
FXR1-208	ENST00000469882	USP17L10	C9JJH3	530 aa		13.6	□□□□□ -0.23
FXR1-208	ENST00000469882	MYC	P01106	439 aa	Predicted RBP	13.6	□□□□□ -0.23
FXR1-208	ENST00000469882	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.6	□□□□□ -0.23	1e-5	■□□□□ 8.9
FXR1-208	ENST00000469882	RAB3GAP1	Q15042	981 aa		13.6	□□□□□ -0.23
FXR1-208	ENST00000469882	UBE3C	Q15386	1083 aa		13.6	□□□□□ -0.23
FXR1-208	ENST00000469882	FAM110C	Q1W6H9	321 aa		13.6	□□□□□ -0.23
FXR1-208	ENST00000469882	ABCB5	Q2M3G0	1257 aa		13.6	□□□□□ -0.23
FXR1-208	ENST00000469882	CERKL	Q49MI3	558 aa	Predicted RBP	13.6	□□□□□ -0.23
FXR1-208	ENST00000469882	NBPF11	Q86T75	865 aa		13.6	□□□□□ -0.23
FXR1-208	ENST00000469882	SLC44A5	Q8NCS7	719 aa		13.6	□□□□□ -0.23
FXR1-208	ENST00000469882	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.6	□□□□□ -0.23
FXR1-208	ENST00000469882	GPATCH3	Q96I76	525 aa		13.6	□□□□□ -0.23
FXR1-208	ENST00000469882	TMOD4	Q9NZQ9	345 aa		13.6	□□□□□ -0.23
FXR1-208	ENST00000469882	C19orf81	C9J6K1	198 aa		13.59	□□□□□ -0.23
FXR1-208	ENST00000469882	SMIM22	K7EJ46	135 aa		13.59	□□□□□ -0.23
FXR1-208	ENST00000469882	EN2	P19622	333 aa	Predicted RBP	13.59	□□□□□ -0.23
FXR1-208	ENST00000469882	HOXD10	P28358	340 aa		13.59	□□□□□ -0.23
FXR1-208	ENST00000469882	GUCY1A2	P33402	732 aa		13.59	□□□□□ -0.23
FXR1-208	ENST00000469882	ZYX	Q15942	572 aa	Known RBP	13.59	□□□□□ -0.23
FXR1-208	ENST00000469882	RAET1E	Q8TD07	263 aa		13.59	□□□□□ -0.23
FXR1-208	ENST00000469882	PUS7L	Q9H0K6	701 aa	Known RBP	13.59	□□□□□ -0.23
FXR1-208	ENST00000469882	EMILIN3	Q9NT22	766 aa		13.59	□□□□□ -0.23
FXR1-208	ENST00000469882	PLXNB2	O15031	1838 aa		13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	DOCK3	Q8IZD9	2030 aa		13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	CYP2D7	A0A087X1C5	515 aa		13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	PEX10	O60683	326 aa		13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	HOXA7	P31268	230 aa	Predicted RBP	13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	GCLC	P48506	637 aa	Predicted RBP	13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	IRX3	P78415	501 aa	Predicted RBP	13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	SEPT2	Q15019	361 aa		13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	ZSCAN25	Q6NSZ9	544 aa		13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	KBTBD3	Q8NAB2	608 aa		13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	PI4K2B	Q8TCG2	481 aa		13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	ACER1	Q8TDN7	264 aa		13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	DYNLL2	Q96FJ2	89 aa		13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	ATP8A2	Q9NTI2	1148 aa		13.58	□□□□□ -0.24
FXR1-208	ENST00000469882	TNPO2	O14787	897 aa	Known RBP	13.57	□□□□□ -0.24
FXR1-208	ENST00000469882	GRK4	P32298	578 aa		13.57	□□□□□ -0.24
FXR1-208	ENST00000469882	HERVK_113	P62684	666 aa		13.57	□□□□□ -0.24
FXR1-208	ENST00000469882	MTFR1	Q15390	333 aa		13.57	□□□□□ -0.24
FXR1-208	ENST00000469882	USP17L2	Q6R6M4	530 aa		13.57	□□□□□ -0.24
FXR1-208	ENST00000469882	C12orf42	Q96LP6	360 aa		13.57	□□□□□ -0.24
FXR1-208	ENST00000469882	P2RX7	Q99572	595 aa	Known RBP	13.57	□□□□□ -0.24
FXR1-208	ENST00000469882	FEZ1	Q99689	392 aa		13.57	□□□□□ -0.24
FXR1-208	ENST00000469882	TXNRD2	Q9NNW7	524 aa		13.57	□□□□□ -0.24
FXR1-208	ENST00000469882	SLC4A4	Q9Y6R1	1079 aa		13.57	□□□□□ -0.24
FXR1-208	ENST00000469882	TTC41P	Q6P2S7	1318 aa		13.57	□□□□□ -0.24
FXR1-208	ENST00000469882	FLT3LG	P49771	235 aa		13.56	□□□□□ -0.24
FXR1-208	ENST00000469882	POTEE	Q6S8J3	1075 aa		13.56	□□□□□ -0.24
FXR1-208	ENST00000469882	OSBP2	Q969R2	916 aa		13.56	□□□□□ -0.24
FXR1-208	ENST00000469882	STRBP	Q96SI9	672 aa	Known RBP	13.56	□□□□□ -0.24
FXR1-208	ENST00000469882	TMEM106C	Q9BVX2	250 aa		13.56	□□□□□ -0.24
FXR1-208	ENST00000469882	KIAA1683	Q9H0B3	1180 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 82 ms