RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 C8orf76Q96K31 380 aa21.15■□□□□ 0.98
SMC4-211ENST00000469858 PCDHAC2Q9Y5I4 1007 aa21.15■□□□□ 0.98
SMC4-211ENST00000469858 MYH8P13535 1937 aa21.14■□□□□ 0.98
SMC4-211ENST00000469858 IARSP41252 1262 aaKnown RBP21.14■□□□□ 0.98
SMC4-211ENST00000469858 HDLBPQ00341 1268 aaKnown RBP21.14■□□□□ 0.98
SMC4-211ENST00000469858 C16orf86Q6ZW13 317 aa21.14■□□□□ 0.98
SMC4-211ENST00000469858 ZNF444Q8N0Y2 327 aaPredicted RBP21.14■□□□□ 0.98
SMC4-211ENST00000469858 FANCBQ8NB91 859 aa21.14■□□□□ 0.98
SMC4-211ENST00000469858 SGIP1Q9BQI5 828 aa21.14■□□□□ 0.98
SMC4-211ENST00000469858 ZNF287Q9HBT7 754 aa21.14■□□□□ 0.98
SMC4-211ENST00000469858 TSPY3P0CV98 308 aa21.14■□□□□ 0.97
SMC4-211ENST00000469858 TSPY8P0CW00 308 aa21.14■□□□□ 0.97
SMC4-211ENST00000469858 CDK8P49336 464 aa21.14■□□□□ 0.97
SMC4-211ENST00000469858 NT5C2P49902 561 aa21.14■□□□□ 0.97
SMC4-211ENST00000469858 MRIQ9BWK5 157 aa21.14■□□□□ 0.97
SMC4-211ENST00000469858 ZSCAN16Q9H4T2 348 aaPredicted RBP21.14■□□□□ 0.97
SMC4-211ENST00000469858 FER1L6Q2WGJ9 1857 aa21.13■□□□□ 0.97
SMC4-211ENST00000469858 MYH6P13533 1939 aa21.13■□□□□ 0.97
SMC4-211ENST00000469858 CCDC196A0A1B0GTZ2 297 aa21.13■□□□□ 0.97
SMC4-211ENST00000469858 RASA1P20936 1047 aa21.13■□□□□ 0.97
SMC4-211ENST00000469858 OTUD7BQ6GQQ9 843 aa21.13■□□□□ 0.97
SMC4-211ENST00000469858 TMEM87AQ8NBN3 555 aa21.13■□□□□ 0.97
SMC4-211ENST00000469858 GPT2Q8TD30 523 aa21.13■□□□□ 0.97
SMC4-211ENST00000469858 SLC26A6Q9BXS9 759 aa21.13■□□□□ 0.97
SMC4-211ENST00000469858 RAD17O75943 681 aa21.12■□□□□ 0.97
SMC4-211ENST00000469858 IFNAR1P17181 557 aa21.12■□□□□ 0.97
SMC4-211ENST00000469858 KRT85P78386 507 aa21.12■□□□□ 0.97
SMC4-211ENST00000469858 ALG1Q9BT22 464 aa21.12■□□□□ 0.97
SMC4-211ENST00000469858 SERPINA10Q9UK55 444 aa21.12■□□□□ 0.97
SMC4-211ENST00000469858 TAOK2Q9UL54 1235 aa21.12■□□□□ 0.97
SMC4-211ENST00000469858 SSRP1Q08945 709 aaKnown RBP21.12■□□□□ 0.97
SMC4-211ENST00000469858 TTC6Q86TZ1 520 aa21.12■□□□□ 0.97
SMC4-211ENST00000469858 AIFM3Q96NN9 605 aa21.12■□□□□ 0.97
SMC4-211ENST00000469858 OSBPL5Q9H0X9 879 aaPredicted RBP21.12■□□□□ 0.97
SMC4-211ENST00000469858 IL17RBQ9NRM6 502 aa21.12■□□□□ 0.97
SMC4-211ENST00000469858 GJB4Q9NTQ9 266 aa21.12■□□□□ 0.97
SMC4-211ENST00000469858 GADD45BO75293 160 aaPredicted RBP21.11■□□□□ 0.97
SMC4-211ENST00000469858 DDAH1O94760 285 aa21.11■□□□□ 0.97
SMC4-211ENST00000469858 NFIAQ12857 509 aa21.11■□□□□ 0.97
SMC4-211ENST00000469858 RCSD1Q6JBY9 416 aa21.11■□□□□ 0.97
SMC4-211ENST00000469858 NIM1KQ8IY84 436 aa21.11■□□□□ 0.97
SMC4-211ENST00000469858 CMTR1Q8N1G2 835 aaKnown RBP21.11■□□□□ 0.97
SMC4-211ENST00000469858 CCDC82Q8N4S0 544 aa21.11■□□□□ 0.97
SMC4-211ENST00000469858 FBXO18Q8NFZ0 1043 aa21.11■□□□□ 0.97
SMC4-211ENST00000469858 VPS33BQ9H267 617 aa21.11■□□□□ 0.97
SMC4-211ENST00000469858 CD2APQ9Y5K6 639 aa21.11■□□□□ 0.97
SMC4-211ENST00000469858 STK36Q9NRP7 1315 aa21.11■□□□□ 0.97
SMC4-211ENST00000469858 PSMD14O00487 310 aa21.1■□□□□ 0.97
SMC4-211ENST00000469858 FMNL1O95466 1100 aaPredicted RBP21.1■□□□□ 0.97
SMC4-211ENST00000469858 CALM1P0DP23 149 aa21.1■□□□□ 0.97
SMC4-211ENST00000469858 CALM2P0DP24 149 aa21.1■□□□□ 0.97
SMC4-211ENST00000469858 CALM3P0DP25 149 aa21.1■□□□□ 0.97
SMC4-211ENST00000469858 CACNB3P54284 484 aa21.1■□□□□ 0.97
SMC4-211ENST00000469858 TROAPQ12815 778 aa21.1■□□□□ 0.97
SMC4-211ENST00000469858 CSPP1Q1MSJ5 1256 aa21.1■□□□□ 0.97
SMC4-211ENST00000469858 PTGER2P43116 358 aa21.1■□□□□ 0.97
SMC4-211ENST00000469858 PPP2R5BQ15173 497 aa21.1■□□□□ 0.97
SMC4-211ENST00000469858 RSBN1LQ6PCB5 846 aaPredicted RBP21.1■□□□□ 0.97
SMC4-211ENST00000469858 TRIM22Q8IYM9 498 aa21.1■□□□□ 0.97
SMC4-211ENST00000469858 MYO3BQ8WXR4 1341 aa21.1■□□□□ 0.97
SMC4-211ENST00000469858 UBE2Q2LH0YL09 131 aa21.09■□□□□ 0.97
SMC4-211ENST00000469858 MBD3O95983 291 aa21.09■□□□□ 0.97
SMC4-211ENST00000469858 CAVIN1Q6NZI2 390 aaKnown RBP21.09■□□□□ 0.97
SMC4-211ENST00000469858 DGKHQ86XP1 1220 aa21.09■□□□□ 0.97
SMC4-211ENST00000469858 TAOK3Q9H2K8 898 aa21.09■□□□□ 0.97
SMC4-211ENST00000469858 KAT14Q9H8E8 782 aa21.09■□□□□ 0.97
SMC4-211ENST00000469858 TFIP11Q9UBB9 837 aaKnown RBP21.09■□□□□ 0.97
SMC4-211ENST00000469858 BCS1LQ9Y276 419 aa21.09■□□□□ 0.97
SMC4-211ENST00000469858 CFAP100Q494V2 611 aa21.08■□□□□ 0.97
SMC4-211ENST00000469858 TPRNQ4KMQ1 711 aa21.08■□□□□ 0.97
SMC4-211ENST00000469858 NBPF11Q86T75 865 aa21.08■□□□□ 0.97
SMC4-211ENST00000469858 TCP11L1Q9NUJ3 509 aa21.08■□□□□ 0.97
SMC4-211ENST00000469858 ZNRF3Q9ULT6 936 aa21.08■□□□□ 0.97
SMC4-211ENST00000469858 VIL1P09327 827 aaKnown RBP21.08■□□□□ 0.96
SMC4-211ENST00000469858 DEKP35659 375 aaKnown RBP21.08■□□□□ 0.96
SMC4-211ENST00000469858 TCP10Q12799 353 aa21.08■□□□□ 0.96
SMC4-211ENST00000469858 CCDC178Q5BJE1 867 aa21.08■□□□□ 0.96
SMC4-211ENST00000469858 CRACR2BQ8N4Y2 399 aaPredicted RBP21.08■□□□□ 0.96
SMC4-211ENST00000469858 RBM28Q9NW13 759 aaKnown RBP21.08■□□□□ 0.96
SMC4-211ENST00000469858 GABPAQ06546 454 aa21.07■□□□□ 0.96
SMC4-211ENST00000469858 CTCFLQ8NI51 663 aaPredicted RBP21.07■□□□□ 0.96
SMC4-211ENST00000469858 SERPINB13Q9UIV8 391 aa21.07■□□□□ 0.96
SMC4-211ENST00000469858 STX8Q9UNK0 236 aa21.07■□□□□ 0.96
SMC4-211ENST00000469858 PLEKHA8P1O95397 391 aa21.06■□□□□ 0.96
SMC4-211ENST00000469858 HLA-DOAP06340 250 aa21.06■□□□□ 0.96
SMC4-211ENST00000469858 GUCY1A2P33402 732 aa21.06■□□□□ 0.96
SMC4-211ENST00000469858 ZFPM1Q8IX07 1006 aa21.06■□□□□ 0.96
SMC4-211ENST00000469858 WASF1Q92558 559 aa21.06■□□□□ 0.96
SMC4-211ENST00000469858 TDRD3Q9H7E2 651 aaKnown RBP21.06■□□□□ 0.96
SMC4-211ENST00000469858 ZBTB12Q9Y330 459 aaPredicted RBP21.06■□□□□ 0.96
SMC4-211ENST00000469858 TRIM29Q14134 588 aa21.06■□□□□ 0.96
SMC4-211ENST00000469858 KRT40Q6A162 431 aa21.06■□□□□ 0.96
SMC4-211ENST00000469858 PNMA1Q8ND90 353 aa21.06■□□□□ 0.96
SMC4-211ENST00000469858 NEDD1Q8NHV4 660 aa21.06■□□□□ 0.96
SMC4-211ENST00000469858 ANKS1AQ92625 1134 aa21.06■□□□□ 0.96
SMC4-211ENST00000469858 IDI2Q9BXS1 227 aa21.06■□□□□ 0.96
SMC4-211ENST00000469858 SCAND2PQ9GZW5 306 aaPredicted RBP21.06■□□□□ 0.96
SMC4-211ENST00000469858 RBM27Q9P2N5 1060 aaKnown RBP21.06■□□□□ 0.96
SMC4-211ENST00000469858 SIPA1L1O43166 1804 aa21.05■□□□□ 0.96
SMC4-211ENST00000469858 NFKBIEO00221 500 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms