RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 C17orf99Q6UX52 265 aa21.15■□□□□ 0.98
MRPL28-208ENST00000469744 FASTKD5Q7L8L6 764 aaKnown RBP21.15■□□□□ 0.98
MRPL28-208ENST00000469744 PLEKHM2Q8IWE5 1019 aa21.15■□□□□ 0.98
MRPL28-208ENST00000469744 TNRC18O15417 2968 aaPredicted RBP21.15■□□□□ 0.98
MRPL28-208ENST00000469744 TCRBV5S4A2TA0A5A2 114 aa21.14■□□□□ 0.98
MRPL28-208ENST00000469744 CHGBP05060 677 aa21.14■□□□□ 0.98
MRPL28-208ENST00000469744 HLA-DOAP06340 250 aa21.14■□□□□ 0.98
MRPL28-208ENST00000469744 CERS3Q8IU89 383 aa21.14■□□□□ 0.98
MRPL28-208ENST00000469744 PARK7Q99497 189 aaKnown RBP21.14■□□□□ 0.98
MRPL28-208ENST00000469744 HAUS7Q99871 368 aa21.14■□□□□ 0.98
MRPL28-208ENST00000469744 LOC285556D6RIA3 1793 aa21.14■□□□□ 0.98
MRPL28-208ENST00000469744 MLLT1Q03111 559 aaPredicted RBP21.13■□□□□ 0.97
MRPL28-208ENST00000469744 TSHZ3Q63HK5 1081 aa21.13■□□□□ 0.97
MRPL28-208ENST00000469744 METTL16Q86W50 562 aaKnown RBP21.13■□□□□ 0.97
MRPL28-208ENST00000469744 FOXP4Q8IVH2 680 aaPredicted RBP21.13■□□□□ 0.97
MRPL28-208ENST00000469744 USP17L5A8MUK1 530 aa21.13■□□□□ 0.97
MRPL28-208ENST00000469744 CTGFP29279 349 aa21.13■□□□□ 0.97
MRPL28-208ENST00000469744 KIF22Q14807 665 aa21.13■□□□□ 0.97
MRPL28-208ENST00000469744 TREML2Q5T2D2 321 aa21.13■□□□□ 0.97
MRPL28-208ENST00000469744 TMED8Q6PL24 325 aaPredicted RBP21.13■□□□□ 0.97
MRPL28-208ENST00000469744 LCORLQ8N3X6 602 aa21.13■□□□□ 0.97
MRPL28-208ENST00000469744 ZNF280CQ8ND82 737 aa21.13■□□□□ 0.97
MRPL28-208ENST00000469744 C22orf23Q9BZE7 217 aa21.13■□□□□ 0.97
MRPL28-208ENST00000469744 HMGCS2P54868 508 aa21.12■□□□□ 0.97
MRPL28-208ENST00000469744 EVX2Q03828 476 aa21.12■□□□□ 0.97
MRPL28-208ENST00000469744 PTCH2Q9Y6C5 1203 aa21.12■□□□□ 0.97
MRPL28-208ENST00000469744 ADD2P35612 726 aa21.11■□□□□ 0.97
MRPL28-208ENST00000469744 TTC22Q5TAA0 569 aa21.11■□□□□ 0.97
MRPL28-208ENST00000469744 SDR42E1Q8WUS8 393 aa21.11■□□□□ 0.97
MRPL28-208ENST00000469744 CRNKL1Q9BZJ0 848 aaKnown RBP21.11■□□□□ 0.97
MRPL28-208ENST00000469744 OSBPL3Q9H4L5 887 aa21.11■□□□□ 0.97
MRPL28-208ENST00000469744 ARMT1Q9H993 441 aa21.11■□□□□ 0.97
MRPL28-208ENST00000469744 ECHDC1Q9NTX5 307 aa21.11■□□□□ 0.97
MRPL28-208ENST00000469744 AGTPBP1Q9UPW5 1226 aa21.11■□□□□ 0.97
MRPL28-208ENST00000469744 ASNSP08243 561 aa21.1■□□□□ 0.97
MRPL28-208ENST00000469744 PLCD1P51178 756 aa21.1■□□□□ 0.97
MRPL28-208ENST00000469744 ARHGEF6Q15052 776 aa21.1■□□□□ 0.97
MRPL28-208ENST00000469744 TRIM47Q96LD4 638 aa21.1■□□□□ 0.97
MRPL28-208ENST00000469744 ZBTB21Q9ULJ3 1066 aa21.1■□□□□ 0.97
MRPL28-208ENST00000469744 BAZ2AQ9UIF9 1905 aaKnown RBP21.1■□□□□ 0.97
MRPL28-208ENST00000469744 MGAMO43451 1857 aa21.1■□□□□ 0.97
MRPL28-208ENST00000469744 CDC45O75419 566 aa21.09■□□□□ 0.97
MRPL28-208ENST00000469744 MBD4O95243 580 aa21.09■□□□□ 0.97
MRPL28-208ENST00000469744 BCRP11274 1271 aa21.09■□□□□ 0.97
MRPL28-208ENST00000469744 PSMC4P43686 418 aa21.09■□□□□ 0.97
MRPL28-208ENST00000469744 RBM25P49756 843 aaKnown RBP21.09■□□□□ 0.97
MRPL28-208ENST00000469744 MTMR2Q13614 643 aa21.09■□□□□ 0.97
MRPL28-208ENST00000469744 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.09■□□□□ 0.97
MRPL28-208ENST00000469744 AS3MTQ9HBK9 375 aa21.09■□□□□ 0.97
MRPL28-208ENST00000469744 SERPINB13Q9UIV8 391 aa21.09■□□□□ 0.97
MRPL28-208ENST00000469744 GH2P01242 217 aa21.08■□□□□ 0.97
MRPL28-208ENST00000469744 POLR3DP05423 398 aaPredicted RBP21.08■□□□□ 0.97
MRPL28-208ENST00000469744 MFAP1P55081 439 aaKnown RBP21.08■□□□□ 0.97
MRPL28-208ENST00000469744 TTC6Q86TZ1 520 aa21.08■□□□□ 0.97
MRPL28-208ENST00000469744 PROCA1Q8NCQ7 364 aaPredicted RBP21.08■□□□□ 0.97
MRPL28-208ENST00000469744 SMCR8Q8TEV9 937 aaPredicted RBP21.08■□□□□ 0.97
MRPL28-208ENST00000469744 MCM9Q9NXL9 1143 aa21.08■□□□□ 0.97
MRPL28-208ENST00000469744 SLC45A1Q9Y2W3 748 aa21.08■□□□□ 0.97
MRPL28-208ENST00000469744 KIAA0100Q14667 2235 aaKnown RBP21.08■□□□□ 0.97
MRPL28-208ENST00000469744 PRKAB2O43741 272 aa21.07■□□□□ 0.96
MRPL28-208ENST00000469744 CYP2D6P10635 497 aa21.07■□□□□ 0.96
MRPL28-208ENST00000469744 WDR18Q9BV38 432 aa21.07■□□□□ 0.96
MRPL28-208ENST00000469744 TBC1D2Q9BYX2 928 aa21.07■□□□□ 0.96
MRPL28-208ENST00000469744 EHD4Q9H223 541 aa21.07■□□□□ 0.96
MRPL28-208ENST00000469744 BRCA2P51587 3418 aa21.07■□□□□ 0.96
MRPL28-208ENST00000469744 FMNL1O95466 1100 aaPredicted RBP21.07■□□□□ 0.96
MRPL28-208ENST00000469744 SLC9C1Q4G0N8 1177 aa21.07■□□□□ 0.96
MRPL28-208ENST00000469744 TATDN1Q6P1N9 297 aa21.07■□□□□ 0.96
MRPL28-208ENST00000469744 OTUD7AQ8TE49 926 aaPredicted RBP21.07■□□□□ 0.96
MRPL28-208ENST00000469744 GPATCH3Q96I76 525 aa21.07■□□□□ 0.96
MRPL28-208ENST00000469744 DCP1AQ9NPI6 582 aaPredicted RBP21.07■□□□□ 0.96
MRPL28-208ENST00000469744 MYCP01106 439 aaPredicted RBP21.06■□□□□ 0.96
MRPL28-208ENST00000469744 GSPT1P15170 499 aaKnown RBP21.06■□□□□ 0.96
MRPL28-208ENST00000469744 OSBPP22059 807 aa21.06■□□□□ 0.96
MRPL28-208ENST00000469744 SHMT1P34896 483 aa21.06■□□□□ 0.96
MRPL28-208ENST00000469744 SH3D19Q5HYK7 790 aa21.06■□□□□ 0.96
MRPL28-208ENST00000469744 ARMC5Q96C12 935 aa21.06■□□□□ 0.96
MRPL28-208ENST00000469744 BACE1P56817 501 aa21.05■□□□□ 0.96
MRPL28-208ENST00000469744 ANKRD13CQ8N6S4 541 aa21.05■□□□□ 0.96
MRPL28-208ENST00000469744 SH3TC2Q8TF17 1288 aa21.05■□□□□ 0.96
MRPL28-208ENST00000469744 MYH8P13535 1937 aa21.04■□□□□ 0.96
MRPL28-208ENST00000469744 POTEFA5A3E0 1075 aa21.04■□□□□ 0.96
MRPL28-208ENST00000469744 UBE3CQ15386 1083 aa21.04■□□□□ 0.96
MRPL28-208ENST00000469744 CERKLQ49MI3 558 aaPredicted RBP21.04■□□□□ 0.96
MRPL28-208ENST00000469744 PUS7LQ9H0K6 701 aaKnown RBP21.04■□□□□ 0.96
MRPL28-208ENST00000469744 ASCC2Q9H1I8 757 aaPredicted RBP21.04■□□□□ 0.96
MRPL28-208ENST00000469744 GINM1Q9NU53 330 aa21.04■□□□□ 0.96
MRPL28-208ENST00000469744 TMOD4Q9NZQ9 345 aa21.04■□□□□ 0.96
MRPL28-208ENST00000469744 SRRDQ9UH36 339 aa21.04■□□□□ 0.96
MRPL28-208ENST00000469744 PNMA3Q9UL41 463 aa21.04■□□□□ 0.96
MRPL28-208ENST00000469744 PDE4DIPQ5VU43 2346 aa21.04■□□□□ 0.96
MRPL28-208ENST00000469744 USP17L10C9JJH3 530 aa21.03■□□□□ 0.96
MRPL28-208ENST00000469744 SMIM22K7EJ46 135 aa21.03■□□□□ 0.96
MRPL28-208ENST00000469744 GNRH1P01148 92 aa21.03■□□□□ 0.96
MRPL28-208ENST00000469744 GABPAQ06546 454 aa21.03■□□□□ 0.96
MRPL28-208ENST00000469744 RAB3GAP1Q15042 981 aa21.03■□□□□ 0.96
MRPL28-208ENST00000469744 ZYXQ15942 572 aaKnown RBP21.03■□□□□ 0.96
MRPL28-208ENST00000469744 ABCB5Q2M3G0 1257 aa21.03■□□□□ 0.96
MRPL28-208ENST00000469744 SLC44A5Q8NCS7 719 aa21.03■□□□□ 0.96
MRPL28-208ENST00000469744 ZNF333Q96JL9 665 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 390.2 ms