RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 HNRNPLLQ8WVV9 542 aaKnown RBP6.38□□□□□ -1.39
VPS8-220ENST00000469713 TMEM87BQ96K49 555 aa6.38□□□□□ -1.39
VPS8-220ENST00000469713 SPOCK3Q9BQ16 436 aa6.38□□□□□ -1.39
VPS8-220ENST00000469713 HIRIP3Q9BW71 556 aaPredicted RBP6.38□□□□□ -1.39
VPS8-220ENST00000469713 ACSS3Q9H6R3 686 aa6.38□□□□□ -1.39
VPS8-220ENST00000469713 SSU72Q9NP77 194 aaKnown RBP6.38□□□□□ -1.39
VPS8-220ENST00000469713 PRKAG3Q9UGI9 489 aa6.38□□□□□ -1.39
VPS8-220ENST00000469713 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.37□□□□□ -1.39
VPS8-220ENST00000469713 C1QTNF9BB2RNN3 333 aa6.37□□□□□ -1.39
VPS8-220ENST00000469713 SLBPQ14493 270 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS8-220ENST00000469713 ARSHQ5FYA8 562 aa6.37□□□□□ -1.39
VPS8-220ENST00000469713 MCATQ8IVS2 390 aaKnown RBP6.37□□□□□ -1.39
VPS8-220ENST00000469713 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS8-220ENST00000469713 MRPL41Q8IXM3 137 aaKnown RBP6.37□□□□□ -1.39
VPS8-220ENST00000469713 CKAP2LQ8IYA6 745 aa6.37□□□□□ -1.39
VPS8-220ENST00000469713 ARMC10Q8N2F6 343 aa6.37□□□□□ -1.39
VPS8-220ENST00000469713 FBLIM1Q8WUP2 373 aa6.37□□□□□ -1.39
VPS8-220ENST00000469713 UTP4Q969X6 686 aaKnown RBP6.37□□□□□ -1.39
VPS8-220ENST00000469713 ATG4CQ96DT6 458 aa6.37□□□□□ -1.39
VPS8-220ENST00000469713 DPH2Q9BQC3 489 aaPredicted RBP6.37□□□□□ -1.39
VPS8-220ENST00000469713 LNPKQ9C0E8 428 aa6.37□□□□□ -1.39
VPS8-220ENST00000469713 LGR6Q9HBX8 967 aa6.37□□□□□ -1.39
VPS8-220ENST00000469713 DAGLAQ9Y4D2 1042 aa6.37□□□□□ -1.39
VPS8-220ENST00000469713 NFICP08651 508 aa6.36□□□□□ -1.39
VPS8-220ENST00000469713 BMP3P12645 472 aa6.36□□□□□ -1.39
VPS8-220ENST00000469713 UVSSAQ2YD98 709 aa6.36□□□□□ -1.39
VPS8-220ENST00000469713 SLC6A19Q695T7 634 aa6.36□□□□□ -1.39
VPS8-220ENST00000469713 NLRC3Q7RTR2 1065 aa6.36□□□□□ -1.39
VPS8-220ENST00000469713 KCT2Q8NC54 265 aa6.36□□□□□ -1.39
VPS8-220ENST00000469713 MYRFLQ96LU7 910 aa6.36□□□□□ -1.39
VPS8-220ENST00000469713 SEMA6CQ9H3T2 930 aa6.36□□□□□ -1.39
VPS8-220ENST00000469713 CNNM2Q9H8M5 875 aa6.36□□□□□ -1.39
VPS8-220ENST00000469713 PCOLCE2Q9UKZ9 415 aa6.36□□□□□ -1.39
VPS8-220ENST00000469713 DYNC1LI2O43237 492 aaPredicted RBP6.35□□□□□ -1.39
VPS8-220ENST00000469713 KLF4O43474 513 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 ACRP10323 421 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 NME1P15531 152 aaKnown RBP6.35□□□□□ -1.39
VPS8-220ENST00000469713 GUCY2CP25092 1073 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 MAP4P27816 1152 aaKnown RBP6.35□□□□□ -1.39
VPS8-220ENST00000469713 RXRBP28702 533 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 CAP2P40123 477 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 YARSP54577 528 aaKnown RBP6.35□□□□□ -1.39
VPS8-220ENST00000469713 PPP2R5EQ16537 467 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 TNNI3KQ59H18 835 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 PRAMEF13Q5VWM6 474 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 CDCP2Q5VXM1 449 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 DPH6Q7L8W6 267 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 FAM20CQ8IXL6 584 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 EZH1Q92800 747 aaPredicted RBP6.35□□□□□ -1.39
VPS8-220ENST00000469713 TM9SF2Q99805 663 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 SSBP4Q9BWG4 385 aaPredicted RBP6.35□□□□□ -1.39
VPS8-220ENST00000469713 YIPF2Q9BWQ6 316 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 TNKS2Q9H2K2 1166 aa6.35□□□□□ -1.39
VPS8-220ENST00000469713 A0A1W2PQH9 124 aa6.34□□□□□ -1.39
VPS8-220ENST00000469713 FAM86C2PA6NEL3 165 aa6.34□□□□□ -1.39
VPS8-220ENST00000469713 CST3P01034 146 aaPredicted RBP6.34□□□□□ -1.39
VPS8-220ENST00000469713 RAG1P15918 1043 aa6.34□□□□□ -1.39
VPS8-220ENST00000469713 POLR2BP30876 1174 aaKnown RBP6.34□□□□□ -1.39
VPS8-220ENST00000469713 ZYXQ15942 572 aaKnown RBP6.34□□□□□ -1.39
VPS8-220ENST00000469713 ARMCX6Q7L4S7 300 aa6.34□□□□□ -1.39
VPS8-220ENST00000469713 SLFN12Q8IYM2 578 aa6.34□□□□□ -1.39
VPS8-220ENST00000469713 XAGE3Q8WTP9 111 aa6.34□□□□□ -1.39
VPS8-220ENST00000469713 SLC9A7Q96T83 725 aa6.34□□□□□ -1.39
VPS8-220ENST00000469713 FOXQ1Q9C009 403 aa6.34□□□□□ -1.39
VPS8-220ENST00000469713 KCNF1Q9H3M0 494 aa6.34□□□□□ -1.39
VPS8-220ENST00000469713 ACTR10Q9NZ32 417 aa6.34□□□□□ -1.39
VPS8-220ENST00000469713 R3HCC1Q9Y3T6 440 aaKnown RBP6.34□□□□□ -1.39
VPS8-220ENST00000469713 TNFRSF10CO14798 259 aa6.33□□□□□ -1.4
VPS8-220ENST00000469713 CASP7P55210 303 aa6.33□□□□□ -1.4
VPS8-220ENST00000469713 RAB33AQ14088 237 aa6.33□□□□□ -1.4
VPS8-220ENST00000469713 CCDC144BQ3MJ40 725 aa6.33□□□□□ -1.4
VPS8-220ENST00000469713 SOGA3Q5TF21 947 aa6.33□□□□□ -1.4
VPS8-220ENST00000469713 NBPF6Q5VWK0 638 aa6.33□□□□□ -1.4
VPS8-220ENST00000469713 TTC6Q86TZ1 520 aa6.33□□□□□ -1.4
VPS8-220ENST00000469713 PHACTR4Q8IZ21 702 aa6.33□□□□□ -1.4
VPS8-220ENST00000469713 TAB3Q8N5C8 712 aaPredicted RBP6.33□□□□□ -1.4
VPS8-220ENST00000469713 C19orf47Q8N9M1 422 aaKnown RBP6.33□□□□□ -1.4
VPS8-220ENST00000469713 NBPF4Q96M43 638 aa6.33□□□□□ -1.4
VPS8-220ENST00000469713 KIF2CQ99661 725 aa6.33□□□□□ -1.4
VPS8-220ENST00000469713 TRIM55Q9BYV6 548 aa6.33□□□□□ -1.4
VPS8-220ENST00000469713 FAM95CA0A1B0GW59 222 aa6.32□□□□□ -1.4
VPS8-220ENST00000469713 DHX15O43143 795 aaKnown RBP6.32□□□□□ -1.4
VPS8-220ENST00000469713 LRIG2O94898 1065 aa6.32□□□□□ -1.4
VPS8-220ENST00000469713 GATA4P43694 442 aa6.32□□□□□ -1.4
VPS8-220ENST00000469713 CDK5R2Q13319 367 aa6.32□□□□□ -1.4
VPS8-220ENST00000469713 SERINC3Q13530 473 aa6.32□□□□□ -1.4
VPS8-220ENST00000469713 MAP7Q14244 749 aa6.32□□□□□ -1.4
VPS8-220ENST00000469713 NFKBIBQ15653 356 aa6.32□□□□□ -1.4
VPS8-220ENST00000469713 LARP1BQ659C4 914 aaKnown RBP6.32□□□□□ -1.4
VPS8-220ENST00000469713 SEZ6L2Q6UXD5 910 aa6.32□□□□□ -1.4
VPS8-220ENST00000469713 UNC5AQ6ZN44 842 aa6.32□□□□□ -1.4
VPS8-220ENST00000469713 BEND4Q6ZU67 534 aa6.32□□□□□ -1.4
VPS8-220ENST00000469713 CELF2-AS1Q8N7Q2 184 aa6.32□□□□□ -1.4
VPS8-220ENST00000469713 BAHD1Q8TBE0 780 aaPredicted RBP6.32□□□□□ -1.4
VPS8-220ENST00000469713 CYB5D2Q8WUJ1 264 aa6.32□□□□□ -1.4
VPS8-220ENST00000469713 OSBPL2Q9H1P3 480 aa6.32□□□□□ -1.4
VPS8-220ENST00000469713 LTBP3Q9NS15 1303 aa6.31□□□□□ -1.4
VPS8-220ENST00000469713 RGS13O14921 159 aa6.31□□□□□ -1.4
VPS8-220ENST00000469713 UBOX5O94941 541 aa6.31□□□□□ -1.4
VPS8-220ENST00000469713 INTS3Q68E01 1043 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms