RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 FLT3LGP49771 235 aa12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 SH3D19Q5HYK7 790 aa12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 PRPF38BQ5VTL8 546 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 TMED8Q6PL24 325 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 COA7Q96BR5 231 aa12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 RIOK1Q9BRS2 568 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 CRNKL1Q9BZJ0 848 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 LRRCC1Q9C099 1032 aa12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 PAG1Q9NWQ8 432 aa12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 SERPINB13Q9UIV8 391 aa12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 ZBTB21Q9ULJ3 1066 aa12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 PDE4DIPQ5VU43 2346 aa12.89□□□□□ -0.35
TGFBR3-205ENST00000468996 KIAA0100Q14667 2235 aaKnown RBP12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 C19orf81C9J6K1 198 aa12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 ADCY3O60266 1144 aa12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 ATP5JP18859 108 aa12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 GCLCP48506 637 aaPredicted RBP12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 PLCD1P51178 756 aa12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 IRX3P78415 501 aaPredicted RBP12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 RAB3GAP1Q15042 981 aa12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 SLFNL1Q499Z3 407 aa12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 CERKLQ49MI3 558 aaPredicted RBP12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 P2RX7Q99572 595 aaKnown RBP12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 RNF208Q9H0X6 261 aa12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 GINM1Q9NU53 330 aa12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 MCM9Q9NXL9 1143 aa12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 ZSWIM8A7E2V4 1837 aa12.88□□□□□ -0.35
TGFBR3-205ENST00000468996 DOCK1Q14185 1865 aa12.87□□□□□ -0.35
TGFBR3-205ENST00000468996 MYO5AQ9Y4I1 1855 aaKnown RBP12.87□□□□□ -0.35
TGFBR3-205ENST00000468996 CCL5P13501 91 aa12.87□□□□□ -0.35
TGFBR3-205ENST00000468996 ELNP15502 786 aa12.87□□□□□ -0.35
TGFBR3-205ENST00000468996 UBXN2AP68543 259 aa12.87□□□□□ -0.35
TGFBR3-205ENST00000468996 ZYXQ15942 572 aaKnown RBP12.87□□□□□ -0.35
TGFBR3-205ENST00000468996 FAM110CQ1W6H9 321 aa12.87□□□□□ -0.35
TGFBR3-205ENST00000468996 ABCB5Q2M3G0 1257 aa12.87□□□□□ -0.35
TGFBR3-205ENST00000468996 TATDN1Q6P1N9 297 aa12.87□□□□□ -0.35
TGFBR3-205ENST00000468996 SDR42E1Q8WUS8 393 aa12.87□□□□□ -0.35
TGFBR3-205ENST00000468996 FEZ1Q99689 392 aa12.87□□□□□ -0.35
TGFBR3-205ENST00000468996 ARMT1Q9H993 441 aa12.87□□□□□ -0.35
TGFBR3-205ENST00000468996 CABP5Q9NP86 173 aa12.87□□□□□ -0.35
TGFBR3-205ENST00000468996 TCRBV5S4A2TA0A5A2 114 aa12.86□□□□□ -0.35
TGFBR3-205ENST00000468996 MPHOSPH10O00566 681 aaKnown RBP12.86□□□□□ -0.35
TGFBR3-205ENST00000468996 PEX10O60683 326 aa12.86□□□□□ -0.35
TGFBR3-205ENST00000468996 USP17L2Q6R6M4 530 aa12.86□□□□□ -0.35
TGFBR3-205ENST00000468996 CCAR1Q8IX12 1150 aaKnown RBP12.86□□□□□ -0.35
TGFBR3-205ENST00000468996 LCORLQ8N3X6 602 aa12.86□□□□□ -0.35
TGFBR3-205ENST00000468996 SLAIN1Q8ND83 568 aa12.86□□□□□ -0.35
TGFBR3-205ENST00000468996 HAUS7Q99871 368 aa12.86□□□□□ -0.35
TGFBR3-205ENST00000468996 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.86□□□□□ -0.35
TGFBR3-205ENST00000468996 EHD4Q9H223 541 aa12.86□□□□□ -0.35
TGFBR3-205ENST00000468996 EMILIN3Q9NT22 766 aa12.86□□□□□ -0.35
TGFBR3-205ENST00000468996 PRKAB2O43741 272 aa12.85□□□□□ -0.35
TGFBR3-205ENST00000468996 CYP2D6P10635 497 aa12.85□□□□□ -0.35
TGFBR3-205ENST00000468996 HOXA7P31268 230 aaPredicted RBP12.85□□□□□ -0.35
TGFBR3-205ENST00000468996 GPRC5AQ8NFJ5 357 aa12.85□□□□□ -0.35
TGFBR3-205ENST00000468996 UNC93B1Q9H1C4 597 aa12.85□□□□□ -0.35
TGFBR3-205ENST00000468996 DCP1AQ9NPI6 582 aaPredicted RBP12.85□□□□□ -0.35
TGFBR3-205ENST00000468996 MBD4O95243 580 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 CHGBP05060 677 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 GJB1P08034 283 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 SHMT1P34896 483 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 ADD2P35612 726 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 HERVK_113P62684 666 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 EVX2Q03828 476 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 IRF5Q13568 498 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 NKX2-3Q8TAU0 364 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 ACER1Q8TDN7 264 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 PAGR1Q9BTK6 254 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 DCTPP1Q9H773 170 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 ECHDC1Q9NTX5 307 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 MAST2Q6P0Q8 1798 aa12.84□□□□□ -0.35
TGFBR3-205ENST00000468996 PHIPQ8WWQ0 1821 aa12.83□□□□□ -0.35
TGFBR3-205ENST00000468996 TFRCP02786 760 aaKnown RBP12.83□□□□□ -0.36
TGFBR3-205ENST00000468996 INHAP05111 366 aa12.83□□□□□ -0.36
TGFBR3-205ENST00000468996 SEPT2Q15019 361 aa12.83□□□□□ -0.36
TGFBR3-205ENST00000468996 PXYLP1Q8TE99 480 aa12.83□□□□□ -0.36
TGFBR3-205ENST00000468996 DPF3Q92784 378 aa12.83□□□□□ -0.36
TGFBR3-205ENST00000468996 DYNLL2Q96FJ2 89 aa12.83□□□□□ -0.36
TGFBR3-205ENST00000468996 DDRGK1Q96HY6 314 aa12.83□□□□□ -0.36
TGFBR3-205ENST00000468996 YTHDC1Q96MU7 727 aaKnown RBP12.83□□□□□ -0.36
TGFBR3-205ENST00000468996 TXNRD2Q9NNW7 524 aa12.83□□□□□ -0.36
TGFBR3-205ENST00000468996 RBPJLQ9UBG7 517 aa12.83□□□□□ -0.36
TGFBR3-205ENST00000468996 MORF4L1Q9UBU8 362 aa12.83□□□□□ -0.36
TGFBR3-205ENST00000468996 MKI67P46013 3256 aaKnown RBP12.83□□□□□ -0.36
TGFBR3-205ENST00000468996 CYP2D7A0A087X1C5 515 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 USP17L15C9J2P7 530 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 USP17L13C9JLJ4 530 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 USP17L11C9JVI0 530 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 USP17L18D6R9N7 530 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 USP17L22D6RA61 530 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 USP17L17D6RBQ6 530 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 USP17L19D6RCP7 530 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 USP17L20D6RJB6 530 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 CYP2B6P20813 491 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 GJA8P48165 433 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 USP14P54578 494 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 USP17L24Q0WX57 530 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 Q3C1V9 767 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 TSHZ3Q63HK5 1081 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms